RNA–Protein interactions for RNA: ENST00000528088.1

CCDC84-205, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-205ENST00000528088 KDM4FA0A1W2PPD8 638 aa17.59■□□□□ 0.41
CCDC84-205ENST00000528088 SLC24A1O60721 1099 aa17.59■□□□□ 0.41
CCDC84-205ENST00000528088 CFAP43Q8NDM7 1665 aa17.58■□□□□ 0.41
CCDC84-205ENST00000528088 HECW1Q76N89 1606 aa17.53■□□□□ 0.4
CCDC84-205ENST00000528088 PLEKHD1A6NEE1 506 aa17.52■□□□□ 0.4
CCDC84-205ENST00000528088 ABCA9Q8IUA7 1624 aa17.51■□□□□ 0.39
CCDC84-205ENST00000528088 CDK13Q14004 1512 aaKnown RBP17.5■□□□□ 0.39
CCDC84-205ENST00000528088 PCF11O94913 1555 aaKnown RBP17.5■□□□□ 0.39
CCDC84-205ENST00000528088 ARAP3Q8WWN8 1544 aa17.45■□□□□ 0.38
CCDC84-205ENST00000528088 CASKIN1Q8WXD9 1431 aa17.45■□□□□ 0.38
CCDC84-205ENST00000528088 RAPGEF3O95398 923 aa17.44■□□□□ 0.38
CCDC84-205ENST00000528088 ZNF219Q9P2Y4 722 aaPredicted RBP17.44■□□□□ 0.38
CCDC84-205ENST00000528088 FYCO1Q9BQS8 1478 aa17.44■□□□□ 0.38
CCDC84-205ENST00000528088 ADGRL1O94910 1474 aa17.43■□□□□ 0.38
CCDC84-205ENST00000528088 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.42■□□□□ 0.38
CCDC84-205ENST00000528088 LRRIQ1Q96JM4 1722 aa17.42■□□□□ 0.38
CCDC84-205ENST00000528088 NEO1Q92859 1461 aa17.41■□□□□ 0.38
CCDC84-205ENST00000528088 CCDC18Q5T9S5 1454 aa17.4■□□□□ 0.38
CCDC84-205ENST00000528088 PHLDB1Q86UU1 1377 aa17.4■□□□□ 0.38
CCDC84-205ENST00000528088 TTC37Q6PGP7 1564 aa17.4■□□□□ 0.38
CCDC84-205ENST00000528088 VPS8Q8N3P4 1428 aa17.38■□□□□ 0.37
CCDC84-205ENST00000528088 CDK11AQ9UQ88 783 aaPredicted RBP17.37■□□□□ 0.37
CCDC84-205ENST00000528088 AKNAQ7Z591 1439 aa17.36■□□□□ 0.37
CCDC84-205ENST00000528088 FANCAO15360 1455 aa17.35■□□□□ 0.37
CCDC84-205ENST00000528088 FRMPD1Q5SYB0 1578 aa17.35■□□□□ 0.37
CCDC84-205ENST00000528088 PLCH2O75038 1416 aa17.32■□□□□ 0.36
CCDC84-205ENST00000528088 TROQ12816 1431 aaPredicted RBP17.32■□□□□ 0.36
CCDC84-205ENST00000528088 KIF14Q15058 1648 aa17.32■□□□□ 0.36
CCDC84-205ENST00000528088 DENND4BO75064 1496 aaPredicted RBP17.31■□□□□ 0.36
CCDC84-205ENST00000528088 APLP2Q06481 763 aa17.29■□□□□ 0.36
CCDC84-205ENST00000528088 MTUS2Q5JR59 1369 aa17.27■□□□□ 0.35
CCDC84-205ENST00000528088 SCAPERQ9BY12 1400 aa17.26■□□□□ 0.35
CCDC84-205ENST00000528088 RICTORQ6R327 1708 aa17.26■□□□□ 0.35
CCDC84-205ENST00000528088 CFAP74Q9C0B2 1584 aa17.26■□□□□ 0.35
CCDC84-205ENST00000528088 EFCAB2Q5VUJ9 269 aa17.25■□□□□ 0.35
CCDC84-205ENST00000528088 TIAM1Q13009 1591 aa17.25■□□□□ 0.35
CCDC84-205ENST00000528088 YEATS2Q9ULM3 1422 aa17.23■□□□□ 0.35
CCDC84-205ENST00000528088 ARID4BQ4LE39 1312 aaPredicted RBP17.23■□□□□ 0.35
CCDC84-205ENST00000528088 EHBP1L1Q8N3D4 1523 aa17.22■□□□□ 0.35
CCDC84-205ENST00000528088 MYO5CQ9NQX4 1742 aa17.22■□□□□ 0.35
CCDC84-205ENST00000528088 POGZQ7Z3K3 1410 aa17.21■□□□□ 0.35
CCDC84-205ENST00000528088 ARHGEF40Q8TER5 1519 aa17.21■□□□□ 0.35
CCDC84-205ENST00000528088 ARHGAP5Q13017 1502 aa17.2■□□□□ 0.34
CCDC84-205ENST00000528088 ZMYM4Q5VZL5 1548 aa17.19■□□□□ 0.34
CCDC84-205ENST00000528088 MKRN4PQ13434 485 aaPredicted RBP17.18■□□□□ 0.34
CCDC84-205ENST00000528088 AFAP1Q8N556 730 aa17.18■□□□□ 0.34
CCDC84-205ENST00000528088 SUPT6HQ7KZ85 1726 aaKnown RBP17.17■□□□□ 0.34
CCDC84-205ENST00000528088 ADAMTSL3P82987 1691 aa17.17■□□□□ 0.34
CCDC84-205ENST00000528088 ZFYVE16Q7Z3T8 1539 aa17.17■□□□□ 0.34
CCDC84-205ENST00000528088 SIGLEC1Q9BZZ2 1709 aa17.16■□□□□ 0.34
CCDC84-205ENST00000528088 MAP3K1Q13233 1512 aa17.16■□□□□ 0.34
CCDC84-205ENST00000528088 CDC42BPBQ9Y5S2 1711 aa17.15■□□□□ 0.34
CCDC84-205ENST00000528088 BCORL1Q5H9F3 1711 aa17.15■□□□□ 0.34
CCDC84-205ENST00000528088 LRRC9Q6ZRR7 1453 aa17.15■□□□□ 0.34
CCDC84-205ENST00000528088 MAGI2Q86UL8 1455 aa17.15■□□□□ 0.34
CCDC84-205ENST00000528088 ARHGEF12Q9NZN5 1544 aa17.14■□□□□ 0.33
CCDC84-205ENST00000528088 PTPRMP28827 1452 aa17.14■□□□□ 0.33
CCDC84-205ENST00000528088 SPDYE4A6NLX3 237 aa17.13■□□□□ 0.33
CCDC84-205ENST00000528088 CDC42BPAQ5VT25 1732 aa17.13■□□□□ 0.33
CCDC84-205ENST00000528088 MLECQ14165 292 aa17.12■□□□□ 0.33
CCDC84-205ENST00000528088 TRAPPC8Q9Y2L5 1435 aa17.12■□□□□ 0.33
CCDC84-205ENST00000528088 HECW2Q9P2P5 1572 aa17.12■□□□□ 0.33
CCDC84-205ENST00000528088 PREX2Q70Z35 1606 aa17.12■□□□□ 0.33
CCDC84-205ENST00000528088 MADDQ8WXG6 1647 aa17.12■□□□□ 0.33
CCDC84-205ENST00000528088 CCNB3Q8WWL7 1395 aa17.11■□□□□ 0.33
CCDC84-205ENST00000528088 ITSN2Q9NZM3 1697 aa17.11■□□□□ 0.33
CCDC84-205ENST00000528088 KANK4Q5T7N3 995 aaPredicted RBP17.11■□□□□ 0.33
CCDC84-205ENST00000528088 ZNF777Q9ULD5 760 aaPredicted RBP17.11■□□□□ 0.33
CCDC84-205ENST00000528088 GPATCH8Q9UKJ3 1502 aaKnown RBP17.11■□□□□ 0.33
CCDC84-205ENST00000528088 ATP10AO60312 1499 aa17.1■□□□□ 0.33
CCDC84-205ENST00000528088 ZNF518AQ6AHZ1 1483 aa17.1■□□□□ 0.33
CCDC84-205ENST00000528088 NCOA2Q15596 1464 aa17.1■□□□□ 0.33
CCDC84-205ENST00000528088 MYT1LQ9UL68 1186 aa17.09■□□□□ 0.33
CCDC84-205ENST00000528088 KDM5CP41229 1560 aa17.09■□□□□ 0.33
CCDC84-205ENST00000528088 ABCC1P33527 1531 aa17.08■□□□□ 0.33
CCDC84-205ENST00000528088 HNRNPMP52272 730 aaKnown RBP eCLIP17.06■□□□□ 0.32
CCDC84-205ENST00000528088 SPINK5Q9NQ38 1064 aaPredicted RBP17.06■□□□□ 0.32
CCDC84-205ENST00000528088 C9orf84Q5VXU9 1444 aa17.06■□□□□ 0.32
CCDC84-205ENST00000528088 CFDP1Q9UEE9 299 aaPredicted RBP17.05■□□□□ 0.32
CCDC84-205ENST00000528088 RIMS1Q86UR5 1692 aaKnown RBP17.05■□□□□ 0.32
CCDC84-205ENST00000528088 SAMD9LQ8IVG5 1584 aa17.05■□□□□ 0.32
CCDC84-205ENST00000528088 PPARGC1BQ86YN6 1023 aaKnown RBP17.04■□□□□ 0.32
CCDC84-205ENST00000528088 FBXO3Q9UK99 471 aa17.04■□□□□ 0.32
CCDC84-205ENST00000528088 MLH3Q9UHC1 1453 aa17.04■□□□□ 0.32
CCDC84-205ENST00000528088 DIP2CQ9Y2E4 1556 aa17.03■□□□□ 0.32
CCDC84-205ENST00000528088 PROM2Q8N271 834 aa17.02■□□□□ 0.32
CCDC84-205ENST00000528088 ZNF644Q9H582 1327 aaPredicted RBP17.02■□□□□ 0.31
CCDC84-205ENST00000528088 SYCP2Q9BX26 1530 aa17.01■□□□□ 0.31
CCDC84-205ENST00000528088 ABCA6Q8N139 1617 aa17■□□□□ 0.31
CCDC84-205ENST00000528088 KIDINS220Q9ULH0 1771 aa16.98■□□□□ 0.31
CCDC84-205ENST00000528088 CEBPAP49715 358 aaPredicted RBP16.98■□□□□ 0.31
CCDC84-205ENST00000528088 KIAA1107Q9UPP5 1409 aa16.98■□□□□ 0.31
CCDC84-205ENST00000528088 SPAG9O60271 1321 aaKnown RBP16.97■□□□□ 0.31
CCDC84-205ENST00000528088 MYOM3Q5VTT5 1437 aa16.96■□□□□ 0.31
CCDC84-205ENST00000528088 FER1L4A9Z1Z3 1794 aa16.96■□□□□ 0.31
CCDC84-205ENST00000528088 PLEKHH2Q8IVE3 1493 aa16.95■□□□□ 0.3
CCDC84-205ENST00000528088 LMTK3Q96Q04 1460 aa16.95■□□□□ 0.3
CCDC84-205ENST00000528088 POLA2Q14181 598 aa16.95■□□□□ 0.3
CCDC84-205ENST00000528088 REREQ9P2R6 1566 aa16.95■□□□□ 0.3
CCDC84-205ENST00000528088 CAMSAP2Q08AD1 1489 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms