RNA–Protein interactions for RNA: ENST00000527792.5

LTBP3-209, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 923 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-209ENST00000527792 ABCA9Q8IUA7 1624 aa23.59■■□□□ 1.37
LTBP3-209ENST00000527792 PHLDB1Q86UU1 1377 aa23.58■■□□□ 1.37
LTBP3-209ENST00000527792 MYO5CQ9NQX4 1742 aa23.55■■□□□ 1.36
LTBP3-209ENST00000527792 ITSN2Q9NZM3 1697 aa23.54■■□□□ 1.36
LTBP3-209ENST00000527792 GPATCH8Q9UKJ3 1502 aaKnown RBP23.54■■□□□ 1.36
LTBP3-209ENST00000527792 MYOM3Q5VTT5 1437 aa23.54■■□□□ 1.36
LTBP3-209ENST00000527792 CDC42BPAQ5VT25 1732 aa23.53■■□□□ 1.36
LTBP3-209ENST00000527792 CFDP1Q9UEE9 299 aaPredicted RBP23.53■■□□□ 1.36
LTBP3-209ENST00000527792 ZNF777Q9ULD5 760 aaPredicted RBP23.52■■□□□ 1.36
LTBP3-209ENST00000527792 ARHGAP5Q13017 1502 aa23.51■■□□□ 1.35
LTBP3-209ENST00000527792 PLCH2O75038 1416 aa23.5■■□□□ 1.35
LTBP3-209ENST00000527792 PREX2Q70Z35 1606 aa23.5■■□□□ 1.35
LTBP3-209ENST00000527792 ARID4BQ4LE39 1312 aaPredicted RBP23.49■■□□□ 1.35
LTBP3-209ENST00000527792 CDC42BPBQ9Y5S2 1711 aa23.47■■□□□ 1.35
LTBP3-209ENST00000527792 EFCAB2Q5VUJ9 269 aa23.47■■□□□ 1.35
LTBP3-209ENST00000527792 FGD6Q6ZV73 1430 aa23.47■■□□□ 1.35
LTBP3-209ENST00000527792 NEO1Q92859 1461 aa23.47■■□□□ 1.35
LTBP3-209ENST00000527792 FAM50AQ14320 339 aaKnown RBP23.46■■□□□ 1.35
LTBP3-209ENST00000527792 MIA2Q96PC5 1412 aa23.46■■□□□ 1.35
LTBP3-209ENST00000527792 PTPRMP28827 1452 aa23.44■■□□□ 1.34
LTBP3-209ENST00000527792 PTPN23Q9H3S7 1636 aa23.43■■□□□ 1.34
LTBP3-209ENST00000527792 FANCAO15360 1455 aa23.42■■□□□ 1.34
LTBP3-209ENST00000527792 ZNF644Q9H582 1327 aaPredicted RBP23.41■■□□□ 1.34
LTBP3-209ENST00000527792 RRBP1Q9P2E9 1410 aaKnown RBP23.4■■□□□ 1.34
LTBP3-209ENST00000527792 CAMSAP2Q08AD1 1489 aa23.38■■□□□ 1.33
LTBP3-209ENST00000527792 FBXO41Q8TF61 875 aa23.38■■□□□ 1.33
LTBP3-209ENST00000527792 CFAP74Q9C0B2 1584 aa23.38■■□□□ 1.33
LTBP3-209ENST00000527792 ADAMTSL3P82987 1691 aa23.38■■□□□ 1.33
LTBP3-209ENST00000527792 SAMD9LQ8IVG5 1584 aa23.37■■□□□ 1.33
LTBP3-209ENST00000527792 TCOF1Q13428 1488 aaKnown RBP23.36■■□□□ 1.33
LTBP3-209ENST00000527792 AKNAQ7Z591 1439 aa23.35■■□□□ 1.33
LTBP3-209ENST00000527792 TRIM26Q12899 539 aaPredicted RBP23.35■■□□□ 1.33
LTBP3-209ENST00000527792 ITGAEP38570 1179 aa23.34■■□□□ 1.33
LTBP3-209ENST00000527792 DENND4BO75064 1496 aaPredicted RBP23.34■■□□□ 1.33
LTBP3-209ENST00000527792 PLEKHH2Q8IVE3 1493 aa23.33■■□□□ 1.33
LTBP3-209ENST00000527792 HNRNPMP52272 730 aaKnown RBP eCLIP23.33■■□□□ 1.33
LTBP3-209ENST00000527792 FRMPD1Q5SYB0 1578 aa23.32■■□□□ 1.32
LTBP3-209ENST00000527792 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.29■■□□□ 1.32
LTBP3-209ENST00000527792 ABCC1P33527 1531 aa23.29■■□□□ 1.32
LTBP3-209ENST00000527792 SYCP2Q9BX26 1530 aa23.29■■□□□ 1.32
LTBP3-209ENST00000527792 BCORL1Q5H9F3 1711 aa23.29■■□□□ 1.32
LTBP3-209ENST00000527792 PLPPR3Q6T4P5 718 aa23.29■■□□□ 1.32
LTBP3-209ENST00000527792 SCAPERQ9BY12 1400 aa23.29■■□□□ 1.32
LTBP3-209ENST00000527792 KIAA1107Q9UPP5 1409 aa23.27■■□□□ 1.32
LTBP3-209ENST00000527792 MADDQ8WXG6 1647 aa23.26■■□□□ 1.31
LTBP3-209ENST00000527792 ARHGEF12Q9NZN5 1544 aa23.25■■□□□ 1.31
LTBP3-209ENST00000527792 RSPH4AQ5TD94 716 aa23.24■■□□□ 1.31
LTBP3-209ENST00000527792 HSPA2P54652 639 aa23.23■■□□□ 1.31
LTBP3-209ENST00000527792 MLECQ14165 292 aa23.23■■□□□ 1.31
LTBP3-209ENST00000527792 LMTK3Q96Q04 1460 aa23.23■■□□□ 1.31
LTBP3-209ENST00000527792 MBD5Q9P267 1494 aa23.23■■□□□ 1.31
LTBP3-209ENST00000527792 DNMT1P26358 1616 aaKnown RBP23.22■■□□□ 1.31
LTBP3-209ENST00000527792 TSPY4P0CV99 314 aa23.22■■□□□ 1.31
LTBP3-209ENST00000527792 TSPY10P0CW01 314 aa23.22■■□□□ 1.31
LTBP3-209ENST00000527792 MYT1LQ9UL68 1186 aa23.22■■□□□ 1.31
LTBP3-209ENST00000527792 DAPK1P53355 1430 aa23.22■■□□□ 1.31
LTBP3-209ENST00000527792 TRAPPC8Q9Y2L5 1435 aa23.22■■□□□ 1.31
LTBP3-209ENST00000527792 ARHGEF5Q12774 1597 aa23.22■■□□□ 1.31
LTBP3-209ENST00000527792 ABCC5O15440 1437 aa23.21■■□□□ 1.31
LTBP3-209ENST00000527792 POGZQ7Z3K3 1410 aa23.21■■□□□ 1.31
LTBP3-209ENST00000527792 YEATS2Q9ULM3 1422 aa23.21■■□□□ 1.31
LTBP3-209ENST00000527792 CCDC141Q6ZP82 1450 aa23.21■■□□□ 1.31
LTBP3-209ENST00000527792 ARHGEF40Q8TER5 1519 aa23.2■■□□□ 1.3
LTBP3-209ENST00000527792 AFAP1Q8N556 730 aa23.2■■□□□ 1.3
LTBP3-209ENST00000527792 CHIC2Q9UKJ5 165 aa23.19■■□□□ 1.3
LTBP3-209ENST00000527792 RICTORQ6R327 1708 aa23.19■■□□□ 1.3
LTBP3-209ENST00000527792 PCGF6Q9BYE7 350 aa23.18■■□□□ 1.3
LTBP3-209ENST00000527792 ZNF518AQ6AHZ1 1483 aa23.16■■□□□ 1.3
LTBP3-209ENST00000527792 RIMS1Q86UR5 1692 aaKnown RBP23.16■■□□□ 1.3
LTBP3-209ENST00000527792 SPAG9O60271 1321 aaKnown RBP23.15■■□□□ 1.3
LTBP3-209ENST00000527792 MAGI2Q86UL8 1455 aa23.15■■□□□ 1.3
LTBP3-209ENST00000527792 CROCC2H7BZ55 1655 aa23.15■■□□□ 1.3
LTBP3-209ENST00000527792 ZFYVE16Q7Z3T8 1539 aa23.14■■□□□ 1.3
LTBP3-209ENST00000527792 PTPRKQ15262 1439 aa23.14■■□□□ 1.29
LTBP3-209ENST00000527792 C9orf84Q5VXU9 1444 aa23.13■■□□□ 1.29
LTBP3-209ENST00000527792 ZMYM4Q5VZL5 1548 aa23.13■■□□□ 1.29
LTBP3-209ENST00000527792 SHANK2Q9UPX8 1470 aa23.11■■□□□ 1.29
LTBP3-209ENST00000527792 RRP7BPQ9NSQ0 103 aa23.08■■□□□ 1.29
LTBP3-209ENST00000527792 ADGBQ8N7X0 1667 aa23.07■■□□□ 1.28
LTBP3-209ENST00000527792 KDM5CP41229 1560 aa23.07■■□□□ 1.28
LTBP3-209ENST00000527792 MAST1Q9Y2H9 1570 aa23.07■■□□□ 1.28
LTBP3-209ENST00000527792 ANKRD30AQ9BXX3 1397 aa23.07■■□□□ 1.28
LTBP3-209ENST00000527792 ATP10AO60312 1499 aa23.06■■□□□ 1.28
LTBP3-209ENST00000527792 SIGLEC1Q9BZZ2 1709 aa23.06■■□□□ 1.28
LTBP3-209ENST00000527792 CEBPAP49715 358 aaPredicted RBP23.06■■□□□ 1.28
LTBP3-209ENST00000527792 ATP7AQ04656 1500 aa23.05■■□□□ 1.28
LTBP3-209ENST00000527792 RTEL1-TNFRSF6BF6WH68 1400 aa23.05■■□□□ 1.28
LTBP3-209ENST00000527792 CERKQ8TCT0 537 aa23.04■■□□□ 1.28
LTBP3-209ENST00000527792 ROCK1Q13464 1354 aa23.03■■□□□ 1.28
LTBP3-209ENST00000527792 INO80Q9ULG1 1556 aaPredicted RBP23.03■■□□□ 1.28
LTBP3-209ENST00000527792 MLH3Q9UHC1 1453 aa23.03■■□□□ 1.28
LTBP3-209ENST00000527792 ADGRL2O95490 1459 aa23.02■■□□□ 1.28
LTBP3-209ENST00000527792 KIDINS220Q9ULH0 1771 aa23.01■■□□□ 1.27
LTBP3-209ENST00000527792 NCOA1Q15788 1441 aa23■■□□□ 1.27
LTBP3-209ENST00000527792 KIF15Q9NS87 1388 aa23■■□□□ 1.27
LTBP3-209ENST00000527792 PLXNC1O60486 1568 aa22.98■■□□□ 1.27
LTBP3-209ENST00000527792 HFM1A2PYH4 1435 aa22.95■■□□□ 1.26
LTBP3-209ENST00000527792 ABCA6Q8N139 1617 aa22.95■■□□□ 1.26
LTBP3-209ENST00000527792 NAIPQ13075 1403 aa22.94■■□□□ 1.26
LTBP3-209ENST00000527792 SETD5Q9C0A6 1442 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms