RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 APLP2Q06481 763 aa21.09■□□□□ 0.97
CAPN1-209ENST00000527469 CCNB3Q8WWL7 1395 aa21.09■□□□□ 0.97
CAPN1-209ENST00000527469 PREX2Q70Z35 1606 aa21.07■□□□□ 0.96
CAPN1-209ENST00000527469 TIAM1Q13009 1591 aa21.06■□□□□ 0.96
CAPN1-209ENST00000527469 ZNF777Q9ULD5 760 aaPredicted RBP21.06■□□□□ 0.96
CAPN1-209ENST00000527469 FRMPD1Q5SYB0 1578 aa21.05■□□□□ 0.96
CAPN1-209ENST00000527469 CFDP1Q9UEE9 299 aaPredicted RBP21.04■□□□□ 0.96
CAPN1-209ENST00000527469 CDC42BPBQ9Y5S2 1711 aa21.04■□□□□ 0.96
CAPN1-209ENST00000527469 POGZQ7Z3K3 1410 aa21.04■□□□□ 0.96
CAPN1-209ENST00000527469 MYT1LQ9UL68 1186 aa21.03■□□□□ 0.96
CAPN1-209ENST00000527469 CDC42BPAQ5VT25 1732 aa21.03■□□□□ 0.96
CAPN1-209ENST00000527469 RICTORQ6R327 1708 aa21.03■□□□□ 0.96
CAPN1-209ENST00000527469 GPATCH8Q9UKJ3 1502 aaKnown RBP21.02■□□□□ 0.96
CAPN1-209ENST00000527469 SUPT6HQ7KZ85 1726 aaKnown RBP21■□□□□ 0.95
CAPN1-209ENST00000527469 ZNF518AQ6AHZ1 1483 aa20.99■□□□□ 0.95
CAPN1-209ENST00000527469 ARID4BQ4LE39 1312 aaPredicted RBP20.99■□□□□ 0.95
CAPN1-209ENST00000527469 LRRC9Q6ZRR7 1453 aa20.98■□□□□ 0.95
CAPN1-209ENST00000527469 MAP3K1Q13233 1512 aa20.98■□□□□ 0.95
CAPN1-209ENST00000527469 ZMYM4Q5VZL5 1548 aa20.98■□□□□ 0.95
CAPN1-209ENST00000527469 MAGI2Q86UL8 1455 aa20.97■□□□□ 0.95
CAPN1-209ENST00000527469 ZFYVE16Q7Z3T8 1539 aa20.97■□□□□ 0.95
CAPN1-209ENST00000527469 ITSN2Q9NZM3 1697 aa20.96■□□□□ 0.95
CAPN1-209ENST00000527469 NCOA2Q15596 1464 aa20.96■□□□□ 0.95
CAPN1-209ENST00000527469 ABCC1P33527 1531 aa20.96■□□□□ 0.95
CAPN1-209ENST00000527469 ARHGEF40Q8TER5 1519 aa20.96■□□□□ 0.95
CAPN1-209ENST00000527469 KDM4FA0A1W2PPD8 638 aa20.96■□□□□ 0.95
CAPN1-209ENST00000527469 AFAP1Q8N556 730 aa20.96■□□□□ 0.95
CAPN1-209ENST00000527469 PLEKHH2Q8IVE3 1493 aa20.94■□□□□ 0.94
CAPN1-209ENST00000527469 KANK4Q5T7N3 995 aaPredicted RBP20.92■□□□□ 0.94
CAPN1-209ENST00000527469 SAMD9LQ8IVG5 1584 aa20.92■□□□□ 0.94
CAPN1-209ENST00000527469 YEATS2Q9ULM3 1422 aa20.91■□□□□ 0.94
CAPN1-209ENST00000527469 SYCP2Q9BX26 1530 aa20.9■□□□□ 0.94
CAPN1-209ENST00000527469 TRAPPC8Q9Y2L5 1435 aa20.9■□□□□ 0.94
CAPN1-209ENST00000527469 HNRNPMP52272 730 aaKnown RBP eCLIP20.9■□□□□ 0.94
CAPN1-209ENST00000527469 ARHGEF12Q9NZN5 1544 aa20.89■□□□□ 0.94
CAPN1-209ENST00000527469 KDM5CP41229 1560 aa20.89■□□□□ 0.93
CAPN1-209ENST00000527469 HECW2Q9P2P5 1572 aa20.89■□□□□ 0.93
CAPN1-209ENST00000527469 KIAA1107Q9UPP5 1409 aa20.87■□□□□ 0.93
CAPN1-209ENST00000527469 ATP10AO60312 1499 aa20.86■□□□□ 0.93
CAPN1-209ENST00000527469 SPAG9O60271 1321 aaKnown RBP20.85■□□□□ 0.93
CAPN1-209ENST00000527469 ZNF644Q9H582 1327 aaPredicted RBP20.85■□□□□ 0.93
CAPN1-209ENST00000527469 MLH3Q9UHC1 1453 aa20.84■□□□□ 0.93
CAPN1-209ENST00000527469 C9orf84Q5VXU9 1444 aa20.84■□□□□ 0.93
CAPN1-209ENST00000527469 CAMSAP2Q08AD1 1489 aa20.81■□□□□ 0.92
CAPN1-209ENST00000527469 MLECQ14165 292 aa20.81■□□□□ 0.92
CAPN1-209ENST00000527469 MYOM3Q5VTT5 1437 aa20.79■□□□□ 0.92
CAPN1-209ENST00000527469 DIP2CQ9Y2E4 1556 aa20.79■□□□□ 0.92
CAPN1-209ENST00000527469 BCORL1Q5H9F3 1711 aa20.78■□□□□ 0.92
CAPN1-209ENST00000527469 RSPH4AQ5TD94 716 aa20.77■□□□□ 0.92
CAPN1-209ENST00000527469 ABCA6Q8N139 1617 aa20.77■□□□□ 0.92
CAPN1-209ENST00000527469 ATP7AQ04656 1500 aa20.76■□□□□ 0.91
CAPN1-209ENST00000527469 MIA2Q96PC5 1412 aa20.76■□□□□ 0.91
CAPN1-209ENST00000527469 CCDC141Q6ZP82 1450 aa20.75■□□□□ 0.91
CAPN1-209ENST00000527469 KIDINS220Q9ULH0 1771 aa20.75■□□□□ 0.91
CAPN1-209ENST00000527469 MBD5Q9P267 1494 aa20.75■□□□□ 0.91
CAPN1-209ENST00000527469 ADAMTSL3P82987 1691 aa20.74■□□□□ 0.91
CAPN1-209ENST00000527469 TSPY4P0CV99 314 aa20.73■□□□□ 0.91
CAPN1-209ENST00000527469 TSPY10P0CW01 314 aa20.73■□□□□ 0.91
CAPN1-209ENST00000527469 INO80Q9ULG1 1556 aaPredicted RBP20.72■□□□□ 0.91
CAPN1-209ENST00000527469 MADDQ8WXG6 1647 aa20.72■□□□□ 0.91
CAPN1-209ENST00000527469 REREQ9P2R6 1566 aa20.72■□□□□ 0.91
CAPN1-209ENST00000527469 SIGLEC1Q9BZZ2 1709 aa20.71■□□□□ 0.91
CAPN1-209ENST00000527469 ESF1Q9H501 851 aaKnown RBP20.7■□□□□ 0.9
CAPN1-209ENST00000527469 PTPRMP28827 1452 aa20.69■□□□□ 0.9
CAPN1-209ENST00000527469 ARHGEF5Q12774 1597 aa20.69■□□□□ 0.9
CAPN1-209ENST00000527469 RTEL1-TNFRSF6BF6WH68 1400 aa20.69■□□□□ 0.9
CAPN1-209ENST00000527469 PLPPR3Q6T4P5 718 aa20.68■□□□□ 0.9
CAPN1-209ENST00000527469 RIMS1Q86UR5 1692 aaKnown RBP20.67■□□□□ 0.9
CAPN1-209ENST00000527469 FGD6Q6ZV73 1430 aa20.67■□□□□ 0.9
CAPN1-209ENST00000527469 A2MP01023 1474 aa20.67■□□□□ 0.9
CAPN1-209ENST00000527469 AGLP35573 1532 aa20.66■□□□□ 0.9
CAPN1-209ENST00000527469 PTPN23Q9H3S7 1636 aa20.66■□□□□ 0.9
CAPN1-209ENST00000527469 FER1L4A9Z1Z3 1794 aa20.66■□□□□ 0.9
CAPN1-209ENST00000527469 ADGBQ8N7X0 1667 aa20.64■□□□□ 0.9
CAPN1-209ENST00000527469 PPARGC1BQ86YN6 1023 aaKnown RBP20.62■□□□□ 0.89
CAPN1-209ENST00000527469 FAM50AQ14320 339 aaKnown RBP20.61■□□□□ 0.89
CAPN1-209ENST00000527469 PLXNC1O60486 1568 aa20.59■□□□□ 0.89
CAPN1-209ENST00000527469 DHX29Q7Z478 1369 aaKnown RBP20.59■□□□□ 0.89
CAPN1-209ENST00000527469 TCOF1Q13428 1488 aaKnown RBP20.58■□□□□ 0.89
CAPN1-209ENST00000527469 GGT6Q6P531 493 aa20.58■□□□□ 0.89
CAPN1-209ENST00000527469 MAST1Q9Y2H9 1570 aa20.56■□□□□ 0.88
CAPN1-209ENST00000527469 CNTLNQ9NXG0 1405 aa20.55■□□□□ 0.88
CAPN1-209ENST00000527469 ABCC5O15440 1437 aa20.54■□□□□ 0.88
CAPN1-209ENST00000527469 DAPK1P53355 1430 aa20.54■□□□□ 0.88
CAPN1-209ENST00000527469 KIF3BO15066 747 aa20.54■□□□□ 0.88
CAPN1-209ENST00000527469 SHANK2Q9UPX8 1470 aa20.54■□□□□ 0.88
CAPN1-209ENST00000527469 DNMT1P26358 1616 aaKnown RBP20.53■□□□□ 0.88
CAPN1-209ENST00000527469 CEBPAP49715 358 aaPredicted RBP20.52■□□□□ 0.88
CAPN1-209ENST00000527469 CROCC2H7BZ55 1655 aa20.51■□□□□ 0.87
CAPN1-209ENST00000527469 CHIC2Q9UKJ5 165 aa20.51■□□□□ 0.87
CAPN1-209ENST00000527469 KIF15Q9NS87 1388 aa20.49■□□□□ 0.87
CAPN1-209ENST00000527469 RRP7BPQ9NSQ0 103 aa20.49■□□□□ 0.87
CAPN1-209ENST00000527469 PPP6R1Q9UPN7 881 aa20.49■□□□□ 0.87
CAPN1-209ENST00000527469 ANKRD30AQ9BXX3 1397 aa20.48■□□□□ 0.87
CAPN1-209ENST00000527469 DUOX2Q9NRD8 1548 aa20.47■□□□□ 0.87
CAPN1-209ENST00000527469 WASHC2CQ9Y4E1 1318 aa20.45■□□□□ 0.86
CAPN1-209ENST00000527469 CLTCQ00610 1675 aaKnown RBP20.45■□□□□ 0.86
CAPN1-209ENST00000527469 C3P01024 1663 aa20.44■□□□□ 0.86
CAPN1-209ENST00000527469 ZMYM3Q14202 1370 aa20.44■□□□□ 0.86
CAPN1-209ENST00000527469 MROH2AA6NES4 1674 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms