RNA–Protein interactions for RNA: ENST00000527265.1

CLNS1A-208, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 620 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-208ENST00000527265 TMEM92Q6UXU6 159 aa9.14□□□□□ -0.95
CLNS1A-208ENST00000527265 SOX12O15370 315 aa9.13□□□□□ -0.95
CLNS1A-208ENST00000527265 PLA2G2EQ9NZK7 142 aa9.13□□□□□ -0.95
CLNS1A-208ENST00000527265 PBX2P40425 430 aa9.11□□□□□ -0.95
CLNS1A-208ENST00000527265 HCSTQ9UBK5 93 aa9.11□□□□□ -0.95
CLNS1A-208ENST00000527265 IFNLR1Q8IU57 520 aaPredicted RBP9.06□□□□□ -0.96
CLNS1A-208ENST00000527265 KHSRPQ92945 711 aaKnown RBP eCLIP9.03□□□□□ -0.96
CLNS1A-208ENST00000527265 MS4A4AQ96JQ5 239 aa9.02□□□□□ -0.97
CLNS1A-208ENST00000527265 PHF8Q9UPP1 1060 aa9.02□□□□□ -0.97
CLNS1A-208ENST00000527265 RIOK3O14730 519 aaKnown RBP9.01□□□□□ -0.97
CLNS1A-208ENST00000527265 NUDT7P0C024 238 aa9□□□□□ -0.97
CLNS1A-208ENST00000527265 VGFO15240 615 aaPredicted RBP8.99□□□□□ -0.97
CLNS1A-208ENST00000527265 NLRP6P59044 892 aa8.99□□□□□ -0.97
CLNS1A-208ENST00000527265 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.97□□□□□ -0.97
CLNS1A-208ENST00000527265 ZFP91Q96JP5 570 aaPredicted RBP8.97□□□□□ -0.97
CLNS1A-208ENST00000527265 AXIN2Q9Y2T1 843 aa8.97□□□□□ -0.97
CLNS1A-208ENST00000527265 LHX6Q9UPM6 363 aa8.96□□□□□ -0.98
CLNS1A-208ENST00000527265 PSDA5PKW4 1024 aaPredicted RBP8.95□□□□□ -0.98
CLNS1A-208ENST00000527265 ADGRD1Q6QNK2 874 aa8.95□□□□□ -0.98
CLNS1A-208ENST00000527265 STAC3Q96MF2 364 aa8.94□□□□□ -0.98
CLNS1A-208ENST00000527265 TAOK2Q9UL54 1235 aa8.94□□□□□ -0.98
CLNS1A-208ENST00000527265 ARHGAP33O14559 1287 aa8.93□□□□□ -0.98
CLNS1A-208ENST00000527265 SLC24A1O60721 1099 aa8.92□□□□□ -0.98
CLNS1A-208ENST00000527265 PCDHGA4Q9Y5G9 962 aa8.92□□□□□ -0.98
CLNS1A-208ENST00000527265 C2orf72A6NCS6 295 aa8.91□□□□□ -0.98
CLNS1A-208ENST00000527265 SLC34A2O95436 690 aa8.9□□□□□ -0.98
CLNS1A-208ENST00000527265 POTEEQ6S8J3 1075 aa8.9□□□□□ -0.98
CLNS1A-208ENST00000527265 TK2O00142 265 aa8.89□□□□□ -0.99
CLNS1A-208ENST00000527265 TMC2Q8TDI7 906 aa8.88□□□□□ -0.99
CLNS1A-208ENST00000527265 KIF3CO14782 793 aa8.87□□□□□ -0.99
CLNS1A-208ENST00000527265 RNF25Q96BH1 459 aaPredicted RBP8.87□□□□□ -0.99
CLNS1A-208ENST00000527265 KCTD12Q96CX2 325 aaKnown RBP8.87□□□□□ -0.99
CLNS1A-208ENST00000527265 KCNH8Q96L42 1107 aa8.87□□□□□ -0.99
CLNS1A-208ENST00000527265 RGS20O76081 388 aa8.86□□□□□ -0.99
CLNS1A-208ENST00000527265 FBXO22Q8NEZ5 403 aa8.86□□□□□ -0.99
CLNS1A-208ENST00000527265 BCL11BQ9C0K0 894 aaPredicted RBP8.85□□□□□ -0.99
CLNS1A-208ENST00000527265 IRX2Q9BZI1 471 aaPredicted RBP8.84□□□□□ -0.99
CLNS1A-208ENST00000527265 STK24Q9Y6E0 443 aa8.83□□□□□ -1
CLNS1A-208ENST00000527265 HRO43593 1189 aa8.81□□□□□ -1
CLNS1A-208ENST00000527265 PPP4R3BQ5MIZ7 849 aa8.81□□□□□ -1
CLNS1A-208ENST00000527265 MFRPQ9BY79 579 aa8.8□□□□□ -1
CLNS1A-208ENST00000527265 PSEN2P49810 448 aa8.79□□□□□ -1
CLNS1A-208ENST00000527265 DMRTA1Q5VZB9 504 aa8.78□□□□□ -1
CLNS1A-208ENST00000527265 STK25O00506 426 aa8.77□□□□□ -1.01
CLNS1A-208ENST00000527265 PTPN5P54829 565 aa8.77□□□□□ -1.01
CLNS1A-208ENST00000527265 IFFO2Q5TF58 517 aa8.75□□□□□ -1.01
CLNS1A-208ENST00000527265 TBC1D12O60347 775 aa8.74□□□□□ -1.01
CLNS1A-208ENST00000527265 KCNK17Q96T54 332 aa8.73□□□□□ -1.01
CLNS1A-208ENST00000527265 PTCD2Q8WV60 388 aaKnown RBP8.72□□□□□ -1.01
CLNS1A-208ENST00000527265 GOLGA8CPA6NN73 597 aa8.71□□□□□ -1.02
CLNS1A-208ENST00000527265 A0A0G2JS52 829 aa8.7□□□□□ -1.02
CLNS1A-208ENST00000527265 KDM4FA0A1W2PPD8 638 aa8.68□□□□□ -1.02
CLNS1A-208ENST00000527265 VPS9D1Q9Y2B5 631 aa8.68□□□□□ -1.02
CLNS1A-208ENST00000527265 THSD4Q6ZMP0 1018 aa8.65□□□□□ -1.02
CLNS1A-208ENST00000527265 FOXK1P85037 733 aa8.64□□□□□ -1.03
CLNS1A-208ENST00000527265 Q6ZNB5 142 aa8.64□□□□□ -1.03
CLNS1A-208ENST00000527265 PLPP6Q8IY26 295 aa8.64□□□□□ -1.03
CLNS1A-208ENST00000527265 WNT2BQ93097 391 aa8.64□□□□□ -1.03
CLNS1A-208ENST00000527265 MRPL50Q8N5N7 158 aaKnown RBP8.62□□□□□ -1.03
CLNS1A-208ENST00000527265 SLC4A5Q9BY07 1137 aa8.62□□□□□ -1.03
CLNS1A-208ENST00000527265 ZNF454Q8N9F8 522 aa8.6□□□□□ -1.03
CLNS1A-208ENST00000527265 NBPF3Q9H094 633 aa8.6□□□□□ -1.03
CLNS1A-208ENST00000527265 PTPREP23469 700 aa8.59□□□□□ -1.03
CLNS1A-208ENST00000527265 BCL2L12Q9HB09 334 aa8.59□□□□□ -1.03
CLNS1A-208ENST00000527265 GPHNQ9NQX3 736 aaPredicted RBP8.59□□□□□ -1.03
CLNS1A-208ENST00000527265 ECM2O94769 699 aaPredicted RBP8.58□□□□□ -1.04
CLNS1A-208ENST00000527265 BHMG1C9JSJ3 638 aaPredicted RBP8.56□□□□□ -1.04
CLNS1A-208ENST00000527265 PPP1R37O75864 691 aa8.56□□□□□ -1.04
CLNS1A-208ENST00000527265 RTN4Q9NQC3 1192 aaKnown RBP8.56□□□□□ -1.04
CLNS1A-208ENST00000527265 DSG2Q14126 1118 aa8.55□□□□□ -1.04
CLNS1A-208ENST00000527265 LAPTM4AQ15012 233 aa8.53□□□□□ -1.04
CLNS1A-208ENST00000527265 UPF1Q92900 1129 aaKnown RBP eCLIP8.52□□□□□ -1.05
CLNS1A-208ENST00000527265 ZBED2Q9BTP6 218 aa8.52□□□□□ -1.05
CLNS1A-208ENST00000527265 ANKK1Q8NFD2 765 aa8.51□□□□□ -1.05
CLNS1A-208ENST00000527265 ITGBL1O95965 494 aaPredicted RBP8.5□□□□□ -1.05
CLNS1A-208ENST00000527265 AMER1Q5JTC6 1135 aaPredicted RBP8.5□□□□□ -1.05
CLNS1A-208ENST00000527265 FOSBP53539 338 aa8.49□□□□□ -1.05
CLNS1A-208ENST00000527265 OXER1Q8TDS5 423 aa8.49□□□□□ -1.05
CLNS1A-208ENST00000527265 NYAP1Q6ZVC0 841 aa8.48□□□□□ -1.05
CLNS1A-208ENST00000527265 JPH4Q96JJ6 628 aa8.47□□□□□ -1.05
CLNS1A-208ENST00000527265 ZDHHC16Q969W1 377 aa8.46□□□□□ -1.06
CLNS1A-208ENST00000527265 RGL2O15211 777 aa8.45□□□□□ -1.06
CLNS1A-208ENST00000527265 KCNC4Q03721 635 aa8.45□□□□□ -1.06
CLNS1A-208ENST00000527265 RABGEF1Q9UJ41 708 aa8.43□□□□□ -1.06
CLNS1A-208ENST00000527265 TRAF7Q6Q0C0 670 aa8.42□□□□□ -1.06
CLNS1A-208ENST00000527265 PPP1R15BQ5SWA1 713 aa8.41□□□□□ -1.06
CLNS1A-208ENST00000527265 ADAM33Q9BZ11 813 aa8.41□□□□□ -1.06
CLNS1A-208ENST00000527265 PPP1R3GB7ZBB8 358 aa8.4□□□□□ -1.06
CLNS1A-208ENST00000527265 BCAMP50895 628 aa8.4□□□□□ -1.06
CLNS1A-208ENST00000527265 LAPTM4BQ86VI4 370 aa8.4□□□□□ -1.06
CLNS1A-208ENST00000527265 SOWAHBA6NEL2 793 aa8.39□□□□□ -1.07
CLNS1A-208ENST00000527265 EVI5O60447 810 aa8.39□□□□□ -1.07
CLNS1A-208ENST00000527265 GFRA3O60609 400 aa8.39□□□□□ -1.07
CLNS1A-208ENST00000527265 ANO8Q9HCE9 1232 aaPredicted RBP8.38□□□□□ -1.07
CLNS1A-208ENST00000527265 RYDENQ9NUL5 291 aaKnown RBP8.37□□□□□ -1.07
CLNS1A-208ENST00000527265 PROX2Q3B8N5 592 aa8.35□□□□□ -1.07
CLNS1A-208ENST00000527265 ZFRQ96KR1 1074 aaKnown RBP8.35□□□□□ -1.07
CLNS1A-208ENST00000527265 CRISPLD2Q9H0B8 497 aa8.34□□□□□ -1.07
CLNS1A-208ENST00000527265 WBP1LQ9NX94 342 aa8.34□□□□□ -1.07
CLNS1A-208ENST00000527265 MAP3K9P80192 1104 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms