RNA–Protein interactions for RNA: ENST00000526645.5

CTSB-212, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-212ENST00000526645 DMRT2Q9Y5R5 561 aa18.35■□□□□ 0.53
CTSB-212ENST00000526645 SOCS7O14512 581 aa18.34■□□□□ 0.53
CTSB-212ENST00000526645 ATP10AO60312 1499 aa18.33■□□□□ 0.53
CTSB-212ENST00000526645 CSRNP3Q8WYN3 585 aa18.33■□□□□ 0.52
CTSB-212ENST00000526645 SCAPERQ9BY12 1400 aa18.32■□□□□ 0.52
CTSB-212ENST00000526645 MLECQ14165 292 aa18.32■□□□□ 0.52
CTSB-212ENST00000526645 PLCH2O75038 1416 aa18.32■□□□□ 0.52
CTSB-212ENST00000526645 SPATA31D1Q6ZQQ2 1576 aa18.3■□□□□ 0.52
CTSB-212ENST00000526645 STRCQ7RTU9 1775 aa18.3■□□□□ 0.52
CTSB-212ENST00000526645 EEA1Q15075 1411 aa18.3■□□□□ 0.52
CTSB-212ENST00000526645 UHRF1BP1Q6BDS2 1440 aa18.3■□□□□ 0.52
CTSB-212ENST00000526645 MYO5CQ9NQX4 1742 aa18.29■□□□□ 0.52
CTSB-212ENST00000526645 ZNF518AQ6AHZ1 1483 aa18.27■□□□□ 0.52
CTSB-212ENST00000526645 ILDR2Q71H61 639 aa18.27■□□□□ 0.52
CTSB-212ENST00000526645 CDK13Q14004 1512 aaKnown RBP18.26■□□□□ 0.51
CTSB-212ENST00000526645 PTPRTO14522 1441 aa18.25■□□□□ 0.51
CTSB-212ENST00000526645 IQSEC2Q5JU85 1478 aa18.25■□□□□ 0.51
CTSB-212ENST00000526645 KDM5CP41229 1560 aa18.25■□□□□ 0.51
CTSB-212ENST00000526645 REREQ9P2R6 1566 aa18.25■□□□□ 0.51
CTSB-212ENST00000526645 SETD1BQ9UPS6 1966 aaKnown RBP18.23■□□□□ 0.51
CTSB-212ENST00000526645 EFCAB2Q5VUJ9 269 aa18.22■□□□□ 0.51
CTSB-212ENST00000526645 RANGAP1P46060 587 aaPredicted RBP18.21■□□□□ 0.51
CTSB-212ENST00000526645 KIF14Q15058 1648 aa18.2■□□□□ 0.5
CTSB-212ENST00000526645 DIP2CQ9Y2E4 1556 aa18.2■□□□□ 0.5
CTSB-212ENST00000526645 CEBPAP49715 358 aaPredicted RBP18.19■□□□□ 0.5
CTSB-212ENST00000526645 C3P01024 1663 aa18.18■□□□□ 0.5
CTSB-212ENST00000526645 LTBP4Q8N2S1 1624 aa18.17■□□□□ 0.5
CTSB-212ENST00000526645 ARHGAP5Q13017 1502 aa18.17■□□□□ 0.5
CTSB-212ENST00000526645 FMN1Q68DA7 1419 aa18.16■□□□□ 0.5
CTSB-212ENST00000526645 CDK11AQ9UQ88 783 aaPredicted RBP18.16■□□□□ 0.5
CTSB-212ENST00000526645 AGLP35573 1532 aa18.16■□□□□ 0.5
CTSB-212ENST00000526645 MLH3Q9UHC1 1453 aa18.14■□□□□ 0.5
CTSB-212ENST00000526645 ABCA6Q8N139 1617 aa18.14■□□□□ 0.49
CTSB-212ENST00000526645 CLIP1P30622 1438 aa18.13■□□□□ 0.49
CTSB-212ENST00000526645 TRAPPC8Q9Y2L5 1435 aa18.13■□□□□ 0.49
CTSB-212ENST00000526645 TROQ12816 1431 aaPredicted RBP18.12■□□□□ 0.49
CTSB-212ENST00000526645 NCOA1Q15788 1441 aa18.12■□□□□ 0.49
CTSB-212ENST00000526645 CNTLNQ9NXG0 1405 aa18.12■□□□□ 0.49
CTSB-212ENST00000526645 ESF1Q9H501 851 aaKnown RBP18.11■□□□□ 0.49
CTSB-212ENST00000526645 AFAP1Q8N556 730 aa18.09■□□□□ 0.49
CTSB-212ENST00000526645 MYT1LQ9UL68 1186 aa18.09■□□□□ 0.49
CTSB-212ENST00000526645 MROH2AA6NES4 1674 aa18.08■□□□□ 0.48
CTSB-212ENST00000526645 ABCC1P33527 1531 aa18.08■□□□□ 0.48
CTSB-212ENST00000526645 PREX2Q70Z35 1606 aa18.07■□□□□ 0.48
CTSB-212ENST00000526645 NPATQ14207 1427 aa18.06■□□□□ 0.48
CTSB-212ENST00000526645 CDC42BPBQ9Y5S2 1711 aa18.06■□□□□ 0.48
CTSB-212ENST00000526645 ITSN2Q9NZM3 1697 aa18.06■□□□□ 0.48
CTSB-212ENST00000526645 ATP1B4Q9UN42 357 aaPredicted RBP18.04■□□□□ 0.48
CTSB-212ENST00000526645 CAMSAP1Q5T5Y3 1602 aa18.04■□□□□ 0.48
CTSB-212ENST00000526645 ARHGAP35Q9NRY4 1499 aa18.02■□□□□ 0.48
CTSB-212ENST00000526645 KIDINS220Q9ULH0 1771 aa18.02■□□□□ 0.48
CTSB-212ENST00000526645 ZNF142P52746 1687 aaPredicted RBP18.01■□□□□ 0.47
CTSB-212ENST00000526645 LRRIQ1Q96JM4 1722 aa18■□□□□ 0.47
CTSB-212ENST00000526645 PLA2R1Q13018 1463 aa18■□□□□ 0.47
CTSB-212ENST00000526645 CCDC18Q5T9S5 1454 aa17.97■□□□□ 0.47
CTSB-212ENST00000526645 MYO3AQ8NEV4 1616 aa17.97■□□□□ 0.47
CTSB-212ENST00000526645 SAMD9LQ8IVG5 1584 aa17.95■□□□□ 0.46
CTSB-212ENST00000526645 UBAP1LF5GYI3 381 aa17.94■□□□□ 0.46
CTSB-212ENST00000526645 PKD2Q13563 968 aa17.94■□□□□ 0.46
CTSB-212ENST00000526645 CEP170BQ9Y4F5 1589 aaPredicted RBP17.94■□□□□ 0.46
CTSB-212ENST00000526645 CDC42BPAQ5VT25 1732 aa17.94■□□□□ 0.46
CTSB-212ENST00000526645 SUPT6HQ7KZ85 1726 aaKnown RBP17.94■□□□□ 0.46
CTSB-212ENST00000526645 TCOF1Q13428 1488 aaKnown RBP17.94■□□□□ 0.46
CTSB-212ENST00000526645 ZNF335Q9H4Z2 1342 aaPredicted RBP17.93■□□□□ 0.46
CTSB-212ENST00000526645 ZMYM3Q14202 1370 aa17.92■□□□□ 0.46
CTSB-212ENST00000526645 UBTFP17480 764 aaKnown RBP17.92■□□□□ 0.46
CTSB-212ENST00000526645 CLTCQ00610 1675 aaKnown RBP17.91■□□□□ 0.46
CTSB-212ENST00000526645 PLXNC1O60486 1568 aa17.91■□□□□ 0.46
CTSB-212ENST00000526645 NCKAP5LQ9HCH0 1330 aa17.89■□□□□ 0.45
CTSB-212ENST00000526645 CASKIN1Q8WXD9 1431 aa17.89■□□□□ 0.45
CTSB-212ENST00000526645 ATP7AQ04656 1500 aa17.88■□□□□ 0.45
CTSB-212ENST00000526645 SYCP2Q9BX26 1530 aa17.88■□□□□ 0.45
CTSB-212ENST00000526645 INO80Q9ULG1 1556 aaPredicted RBP17.88■□□□□ 0.45
CTSB-212ENST00000526645 PTPRKQ15262 1439 aa17.87■□□□□ 0.45
CTSB-212ENST00000526645 MED1Q15648 1581 aaPredicted RBP17.87■□□□□ 0.45
CTSB-212ENST00000526645 SPAG9O60271 1321 aaKnown RBP17.86■□□□□ 0.45
CTSB-212ENST00000526645 A2MP01023 1474 aa17.85■□□□□ 0.45
CTSB-212ENST00000526645 PLEKHH2Q8IVE3 1493 aa17.85■□□□□ 0.45
CTSB-212ENST00000526645 PPP6R1Q9UPN7 881 aa17.85■□□□□ 0.45
CTSB-212ENST00000526645 CPS1P31327 1500 aa17.84■□□□□ 0.45
CTSB-212ENST00000526645 A2ML1A8K2U0 1454 aa17.82■□□□□ 0.44
CTSB-212ENST00000526645 FYCO1Q9BQS8 1478 aa17.82■□□□□ 0.44
CTSB-212ENST00000526645 KIAA1107Q9UPP5 1409 aa17.82■□□□□ 0.44
CTSB-212ENST00000526645 POLR1AO95602 1720 aaPredicted RBP17.82■□□□□ 0.44
CTSB-212ENST00000526645 ADGBQ8N7X0 1667 aa17.81■□□□□ 0.44
CTSB-212ENST00000526645 DNMT1P26358 1616 aaKnown RBP17.8■□□□□ 0.44
CTSB-212ENST00000526645 GPATCH8Q9UKJ3 1502 aaKnown RBP17.8■□□□□ 0.44
CTSB-212ENST00000526645 TOM1O60784 492 aa17.78■□□□□ 0.44
CTSB-212ENST00000526645 ZNF777Q9ULD5 760 aaPredicted RBP17.78■□□□□ 0.44
CTSB-212ENST00000526645 FAM135AQ9P2D6 1515 aa17.77■□□□□ 0.43
CTSB-212ENST00000526645 NEURL4Q96JN8 1562 aa17.76■□□□□ 0.43
CTSB-212ENST00000526645 HSPA1LP34931 641 aa17.76■□□□□ 0.43
CTSB-212ENST00000526645 EHMT2Q96KQ7 1210 aa17.76■□□□□ 0.43
CTSB-212ENST00000526645 SCAF1Q9H7N4 1312 aaKnown RBP17.75■□□□□ 0.43
CTSB-212ENST00000526645 HNRNPMP52272 730 aaKnown RBP eCLIP17.75■□□□□ 0.43
CTSB-212ENST00000526645 SHANK2Q9UPX8 1470 aa17.75■□□□□ 0.43
CTSB-212ENST00000526645 GGT6Q6P531 493 aa17.74■□□□□ 0.43
CTSB-212ENST00000526645 PIP4K2BP78356 416 aa17.72■□□□□ 0.43
CTSB-212ENST00000526645 CCNB3Q8WWL7 1395 aa17.71■□□□□ 0.43
CTSB-212ENST00000526645 CFDP1Q9UEE9 299 aaPredicted RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms