RNA–Protein interactions for RNA: ENST00000526480.1

CSTF3-207, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3

Gene CSTF3, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-207ENST00000526480 PLCD3Q8N3E9 789 aa11.7□□□□□ -0.54
CSTF3-207ENST00000526480 ADAMTSL3P82987 1691 aa11.7□□□□□ -0.54
CSTF3-207ENST00000526480 KLHL34Q8N239 644 aa11.69□□□□□ -0.54
CSTF3-207ENST00000526480 MIER1Q8N108 512 aa11.68□□□□□ -0.54
CSTF3-207ENST00000526480 CERKQ8TCT0 537 aa11.68□□□□□ -0.54
CSTF3-207ENST00000526480 CHADLQ6NUI6 762 aa11.67□□□□□ -0.54
CSTF3-207ENST00000526480 SPOCK2Q92563 424 aa11.67□□□□□ -0.54
CSTF3-207ENST00000526480 PTPRMP28827 1452 aa11.67□□□□□ -0.54
CSTF3-207ENST00000526480 PLEKHG5O94827 1062 aa11.66□□□□□ -0.54
CSTF3-207ENST00000526480 JPH4Q96JJ6 628 aa11.66□□□□□ -0.54
CSTF3-207ENST00000526480 POTEIP0CG38 1075 aa11.65□□□□□ -0.54
CSTF3-207ENST00000526480 FHAD1B1AJZ9 1412 aa11.65□□□□□ -0.54
CSTF3-207ENST00000526480 ASXL2Q76L83 1435 aa11.64□□□□□ -0.55
CSTF3-207ENST00000526480 CREBZFQ9NS37 354 aa11.63□□□□□ -0.55
CSTF3-207ENST00000526480 ABCC2Q92887 1545 aa11.63□□□□□ -0.55
CSTF3-207ENST00000526480 MADDQ8WXG6 1647 aa11.62□□□□□ -0.55
CSTF3-207ENST00000526480 POTEMA6NI47 508 aa11.62□□□□□ -0.55
CSTF3-207ENST00000526480 SLC24A1O60721 1099 aa11.62□□□□□ -0.55
CSTF3-207ENST00000526480 PKD2Q13563 968 aa11.61□□□□□ -0.55
CSTF3-207ENST00000526480 PLB1Q6P1J6 1458 aa11.59□□□□□ -0.55
CSTF3-207ENST00000526480 TEX14Q8IWB6 1497 aa11.59□□□□□ -0.55
CSTF3-207ENST00000526480 EPRSP07814 1512 aaKnown RBP11.59□□□□□ -0.55
CSTF3-207ENST00000526480 BCORL1Q5H9F3 1711 aa11.58□□□□□ -0.56
CSTF3-207ENST00000526480 ERICH3Q5RHP9 1530 aa11.57□□□□□ -0.56
CSTF3-207ENST00000526480 RIMS1Q86UR5 1692 aaKnown RBP11.57□□□□□ -0.56
CSTF3-207ENST00000526480 HSPA2P54652 639 aa11.56□□□□□ -0.56
CSTF3-207ENST00000526480 ZBTB47Q9UFB7 747 aaPredicted RBP11.56□□□□□ -0.56
CSTF3-207ENST00000526480 FARP1Q9Y4F1 1045 aaPredicted RBP11.55□□□□□ -0.56
CSTF3-207ENST00000526480 POTEGQ6S5H5 508 aa11.54□□□□□ -0.56
CSTF3-207ENST00000526480 KIAA0586Q9BVV6 1533 aa11.54□□□□□ -0.56
CSTF3-207ENST00000526480 ZCCHC11Q5TAX3 1644 aaKnown RBP11.53□□□□□ -0.56
CSTF3-207ENST00000526480 STRCQ7RTU9 1775 aa11.51□□□□□ -0.57
CSTF3-207ENST00000526480 CFAP43Q8NDM7 1665 aa11.49□□□□□ -0.57
CSTF3-207ENST00000526480 BIVM-ERCC5R4GMW8 1640 aa11.46□□□□□ -0.57
CSTF3-207ENST00000526480 TTBK1Q5TCY1 1321 aaPredicted RBP11.46□□□□□ -0.57
CSTF3-207ENST00000526480 ECM2O94769 699 aaPredicted RBP11.46□□□□□ -0.57
CSTF3-207ENST00000526480 MNX1P50219 401 aaPredicted RBP11.46□□□□□ -0.57
CSTF3-207ENST00000526480 UHRF1BP1LA0JNW5 1464 aa11.45□□□□□ -0.58
CSTF3-207ENST00000526480 PTPRGP23470 1445 aa11.45□□□□□ -0.58
CSTF3-207ENST00000526480 PCDH10Q9P2E7 1040 aa11.44□□□□□ -0.58
CSTF3-207ENST00000526480 MED1Q15648 1581 aaPredicted RBP11.44□□□□□ -0.58
CSTF3-207ENST00000526480 OTUD5Q96G74 571 aa11.43□□□□□ -0.58
CSTF3-207ENST00000526480 MAGI3Q5TCQ9 1506 aa11.43□□□□□ -0.58
CSTF3-207ENST00000526480 KDM5BQ9UGL1 1544 aa11.43□□□□□ -0.58
CSTF3-207ENST00000526480 WRNQ14191 1432 aaPredicted RBP eCLIP11.43□□□□□ -0.58
CSTF3-207ENST00000526480 DCBLD2Q96PD2 775 aa11.42□□□□□ -0.58
CSTF3-207ENST00000526480 SIGLEC1Q9BZZ2 1709 aa11.41□□□□□ -0.58
CSTF3-207ENST00000526480 CIZ1Q9ULV3 898 aaPredicted RBP11.4□□□□□ -0.58
CSTF3-207ENST00000526480 PREX1Q8TCU6 1659 aa11.4□□□□□ -0.59
CSTF3-207ENST00000526480 FRMPD1Q5SYB0 1578 aa11.39□□□□□ -0.59
CSTF3-207ENST00000526480 LTBP4Q8N2S1 1624 aa11.38□□□□□ -0.59
CSTF3-207ENST00000526480 WDR7Q9Y4E6 1490 aa11.38□□□□□ -0.59
CSTF3-207ENST00000526480 UACAQ9BZF9 1416 aa11.37□□□□□ -0.59
CSTF3-207ENST00000526480 FER1L4A9Z1Z3 1794 aa11.37□□□□□ -0.59
CSTF3-207ENST00000526480 ARAP3Q8WWN8 1544 aa11.37□□□□□ -0.59
CSTF3-207ENST00000526480 TNIKQ9UKE5 1360 aa11.37□□□□□ -0.59
CSTF3-207ENST00000526480 CD109Q6YHK3 1445 aa11.36□□□□□ -0.59
CSTF3-207ENST00000526480 PAK3O75914 559 aaPredicted RBP11.36□□□□□ -0.59
CSTF3-207ENST00000526480 CD44P16070 742 aaKnown RBP11.36□□□□□ -0.59
CSTF3-207ENST00000526480 NUBP1P53384 320 aa11.36□□□□□ -0.59
CSTF3-207ENST00000526480 RGL2O15211 777 aa11.35□□□□□ -0.59
CSTF3-207ENST00000526480 GSE1Q14687 1217 aa11.33□□□□□ -0.6
CSTF3-207ENST00000526480 ARHGEF40Q8TER5 1519 aa11.32□□□□□ -0.6
CSTF3-207ENST00000526480 CLCN6P51797 869 aa11.32□□□□□ -0.6
CSTF3-207ENST00000526480 PLCB2Q00722 1185 aa11.32□□□□□ -0.6
CSTF3-207ENST00000526480 TTC37Q6PGP7 1564 aa11.32□□□□□ -0.6
CSTF3-207ENST00000526480 TSPYL2Q9H2G4 693 aaPredicted RBP11.31□□□□□ -0.6
CSTF3-207ENST00000526480 IQSEC2Q5JU85 1478 aa11.31□□□□□ -0.6
CSTF3-207ENST00000526480 DISP1Q96F81 1524 aa11.3□□□□□ -0.6
CSTF3-207ENST00000526480 ZRANB1Q9UGI0 708 aa11.3□□□□□ -0.6
CSTF3-207ENST00000526480 YEATS2Q9ULM3 1422 aa11.29□□□□□ -0.6
CSTF3-207ENST00000526480 IQGAP2Q13576 1575 aa11.28□□□□□ -0.6
CSTF3-207ENST00000526480 RASEFQ8IZ41 740 aa11.28□□□□□ -0.6
CSTF3-207ENST00000526480 ARID4BQ4LE39 1312 aaPredicted RBP11.28□□□□□ -0.6
CSTF3-207ENST00000526480 CARMIL2Q6F5E8 1435 aa11.27□□□□□ -0.6
CSTF3-207ENST00000526480 DCAF8Q5TAQ9 597 aa11.27□□□□□ -0.61
CSTF3-207ENST00000526480 FAM212AQ96EL1 285 aa11.27□□□□□ -0.61
CSTF3-207ENST00000526480 RICTORQ6R327 1708 aa11.26□□□□□ -0.61
CSTF3-207ENST00000526480 POTEB2H3BUK9 544 aa11.26□□□□□ -0.61
CSTF3-207ENST00000526480 RAPGEF3O95398 923 aa11.24□□□□□ -0.61
CSTF3-207ENST00000526480 SRCAPQ6ZRS2 3230 aa11.24□□□□□ -0.61
CSTF3-207ENST00000526480 KIAA0556O60303 1618 aa11.23□□□□□ -0.61
CSTF3-207ENST00000526480 PTPRTO14522 1441 aa11.22□□□□□ -0.61
CSTF3-207ENST00000526480 ABCA9Q8IUA7 1624 aa11.22□□□□□ -0.61
CSTF3-207ENST00000526480 BBXQ8WY36 941 aaPredicted RBP11.22□□□□□ -0.61
CSTF3-207ENST00000526480 KCNH8Q96L42 1107 aa11.22□□□□□ -0.61
CSTF3-207ENST00000526480 SETD1BQ9UPS6 1966 aaKnown RBP11.21□□□□□ -0.62
CSTF3-207ENST00000526480 RNF25Q96BH1 459 aaPredicted RBP11.2□□□□□ -0.62
CSTF3-207ENST00000526480 SETD1AO15047 1707 aaKnown RBP11.19□□□□□ -0.62
CSTF3-207ENST00000526480 UBAP1LF5GYI3 381 aa11.18□□□□□ -0.62
CSTF3-207ENST00000526480 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.18□□□□□ -0.62
CSTF3-207ENST00000526480 FANCAO15360 1455 aa11.18□□□□□ -0.62
CSTF3-207ENST00000526480 ZNF579Q8NAF0 562 aaKnown RBP11.17□□□□□ -0.62
CSTF3-207ENST00000526480 ABCA8O94911 1581 aa11.16□□□□□ -0.62
CSTF3-207ENST00000526480 CCDC61Q9Y6R9 512 aa11.16□□□□□ -0.62
CSTF3-207ENST00000526480 UGGT2Q9NYU1 1516 aa11.15□□□□□ -0.62
CSTF3-207ENST00000526480 ARHGEF12Q9NZN5 1544 aa11.15□□□□□ -0.62
CSTF3-207ENST00000526480 CHGAP10645 457 aaKnown RBP11.15□□□□□ -0.62
CSTF3-207ENST00000526480 HSPA1LP34931 641 aa11.15□□□□□ -0.62
CSTF3-207ENST00000526480 IGF1RP08069 1367 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms