RNA–Protein interactions for RNA: ENST00000526262.5

PPFIA1-206, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 4,537 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-206ENST00000526262 HECW1Q76N89 1606 aa12.06□□□□□ -0.48
PPFIA1-206ENST00000526262 EHBP1L1Q8N3D4 1523 aa12.06□□□□□ -0.48
PPFIA1-206ENST00000526262 EPRSP07814 1512 aaKnown RBP12.06□□□□□ -0.48
PPFIA1-206ENST00000526262 TROQ12816 1431 aaPredicted RBP12.06□□□□□ -0.48
PPFIA1-206ENST00000526262 PCF11O94913 1555 aaKnown RBP12.05□□□□□ -0.48
PPFIA1-206ENST00000526262 TRHP20396 242 aaPredicted RBP12.05□□□□□ -0.48
PPFIA1-206ENST00000526262 L3MBTL2Q969R5 705 aa12.04□□□□□ -0.48
PPFIA1-206ENST00000526262 MAP3K1Q13233 1512 aa12.04□□□□□ -0.48
PPFIA1-206ENST00000526262 FAM9BQ8IZU0 186 aa12.03□□□□□ -0.48
PPFIA1-206ENST00000526262 SENP3Q9H4L4 574 aaPredicted RBP12.03□□□□□ -0.48
PPFIA1-206ENST00000526262 MIA2Q96PC5 1412 aa12.03□□□□□ -0.48
PPFIA1-206ENST00000526262 CDK13Q14004 1512 aaKnown RBP12.03□□□□□ -0.48
PPFIA1-206ENST00000526262 TMC1Q8TDI8 760 aa12.02□□□□□ -0.48
PPFIA1-206ENST00000526262 HNRNPUQ00839 825 aaKnown RBP eCLIP12.02□□□□□ -0.49
PPFIA1-206ENST00000526262 PLB1Q6P1J6 1458 aa12.01□□□□□ -0.49
PPFIA1-206ENST00000526262 MRS2Q9HD23 443 aa12.01□□□□□ -0.49
PPFIA1-206ENST00000526262 WDR62O43379 1518 aa12.01□□□□□ -0.49
PPFIA1-206ENST00000526262 MLECQ14165 292 aa12.01□□□□□ -0.49
PPFIA1-206ENST00000526262 UACAQ9BZF9 1416 aa12.01□□□□□ -0.49
PPFIA1-206ENST00000526262 HSPA5P11021 654 aaKnown RBP11.99□□□□□ -0.49
PPFIA1-206ENST00000526262 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.99□□□□□ -0.492e-23■□□□□ 10
PPFIA1-206ENST00000526262 CDCA8Q53HL2 280 aa11.99□□□□□ -0.49
PPFIA1-206ENST00000526262 KIF15Q9NS87 1388 aa11.98□□□□□ -0.49
PPFIA1-206ENST00000526262 SUPT6HQ7KZ85 1726 aaKnown RBP11.97□□□□□ -0.49
PPFIA1-206ENST00000526262 ANKRD50Q9ULJ7 1429 aa11.97□□□□□ -0.49
PPFIA1-206ENST00000526262 ADAMTS12P58397 1594 aa11.96□□□□□ -0.49
PPFIA1-206ENST00000526262 WASHC2CQ9Y4E1 1318 aa11.95□□□□□ -0.5
PPFIA1-206ENST00000526262 AFAP1Q8N556 730 aa11.95□□□□□ -0.5
PPFIA1-206ENST00000526262 ARHGAP5Q13017 1502 aa11.95□□□□□ -0.5
PPFIA1-206ENST00000526262 NEFMP07197 916 aa11.94□□□□□ -0.5
PPFIA1-206ENST00000526262 FAM69CQ0P6D2 419 aa11.94□□□□□ -0.5
PPFIA1-206ENST00000526262 HFM1A2PYH4 1435 aa11.94□□□□□ -0.5
PPFIA1-206ENST00000526262 EIF4G3O43432 1585 aaKnown RBP11.94□□□□□ -0.5
PPFIA1-206ENST00000526262 ABCA5Q8WWZ7 1642 aa11.93□□□□□ -0.5
PPFIA1-206ENST00000526262 CCDC144AA2RUR9 1427 aa11.92□□□□□ -0.5
PPFIA1-206ENST00000526262 TMF1P82094 1093 aa11.92□□□□□ -0.5
PPFIA1-206ENST00000526262 CTTNBP2Q8WZ74 1663 aa11.91□□□□□ -0.5
PPFIA1-206ENST00000526262 KNSTRNQ9Y448 316 aa11.91□□□□□ -0.5
PPFIA1-206ENST00000526262 ROCK2O75116 1388 aaKnown RBP11.91□□□□□ -0.5
PPFIA1-206ENST00000526262 UGGT2Q9NYU1 1516 aa11.91□□□□□ -0.5
PPFIA1-206ENST00000526262 DAPK1P53355 1430 aa11.9□□□□□ -0.5
PPFIA1-206ENST00000526262 SALL2Q9Y467 1007 aaPredicted RBP11.9□□□□□ -0.5
PPFIA1-206ENST00000526262 C9orf84Q5VXU9 1444 aa11.9□□□□□ -0.5
PPFIA1-206ENST00000526262 TARBP1Q13395 1621 aaKnown RBP11.89□□□□□ -0.51
PPFIA1-206ENST00000526262 WDR43Q15061 677 aaKnown RBP eCLIP11.89□□□□□ -0.51
PPFIA1-206ENST00000526262 POGKQ9P215 609 aa11.89□□□□□ -0.51
PPFIA1-206ENST00000526262 ARHGEF11O15085 1522 aa11.89□□□□□ -0.51
PPFIA1-206ENST00000526262 PLEKHH2Q8IVE3 1493 aa11.89□□□□□ -0.51
PPFIA1-206ENST00000526262 NAIPQ13075 1403 aa11.88□□□□□ -0.51
PPFIA1-206ENST00000526262 HDGFP51858 240 aaKnown RBP11.87□□□□□ -0.51
PPFIA1-206ENST00000526262 THOC2Q8NI27 1593 aaKnown RBP11.87□□□□□ -0.51
PPFIA1-206ENST00000526262 NUP160Q12769 1436 aa11.87□□□□□ -0.51
PPFIA1-206ENST00000526262 NUP153P49790 1475 aaKnown RBP11.86□□□□□ -0.51
PPFIA1-206ENST00000526262 PBRM1Q86U86 1689 aa11.85□□□□□ -0.51
PPFIA1-206ENST00000526262 ROCK1Q13464 1354 aa11.85□□□□□ -0.51
PPFIA1-206ENST00000526262 PTPN23Q9H3S7 1636 aa11.84□□□□□ -0.51
PPFIA1-206ENST00000526262 KIAA0556O60303 1618 aa11.84□□□□□ -0.51
PPFIA1-206ENST00000526262 ATP10BO94823 1461 aa11.84□□□□□ -0.51
PPFIA1-206ENST00000526262 FKBP8Q14318 412 aa11.84□□□□□ -0.51
PPFIA1-206ENST00000526262 WDR97A6NE52 1622 aa11.84□□□□□ -0.51
PPFIA1-206ENST00000526262 RAPGEF6Q8TEU7 1601 aa11.84□□□□□ -0.51
PPFIA1-206ENST00000526262 ABCC5O15440 1437 aa11.83□□□□□ -0.52
PPFIA1-206ENST00000526262 CAMSAP2Q08AD1 1489 aa11.83□□□□□ -0.52
PPFIA1-206ENST00000526262 CCER2I3L3R5 266 aa11.83□□□□□ -0.52
PPFIA1-206ENST00000526262 SCAPERQ9BY12 1400 aa11.82□□□□□ -0.52
PPFIA1-206ENST00000526262 KIF14Q15058 1648 aa11.82□□□□□ -0.52
PPFIA1-206ENST00000526262 CANXP27824 592 aaKnown RBP11.82□□□□□ -0.52
PPFIA1-206ENST00000526262 DISP1Q96F81 1524 aa11.82□□□□□ -0.52
PPFIA1-206ENST00000526262 CC2D1BQ5T0F9 858 aaKnown RBP11.81□□□□□ -0.52
PPFIA1-206ENST00000526262 ST20-MTHFSA0A0A6YYL1 179 aa11.81□□□□□ -0.52
PPFIA1-206ENST00000526262 STK26Q9P289 416 aa11.81□□□□□ -0.52
PPFIA1-206ENST00000526262 SAFB2Q14151 953 aaKnown RBP eCLIP11.81□□□□□ -0.52
PPFIA1-206ENST00000526262 GPATCH8Q9UKJ3 1502 aaKnown RBP11.8□□□□□ -0.52
PPFIA1-206ENST00000526262 CCDC141Q6ZP82 1450 aa11.8□□□□□ -0.52
PPFIA1-206ENST00000526262 NUTM2DQ5VT03 806 aaPredicted RBP11.79□□□□□ -0.52
PPFIA1-206ENST00000526262 C14orf37Q86TY3 774 aa11.79□□□□□ -0.52
PPFIA1-206ENST00000526262 KIAA1107Q9UPP5 1409 aa11.79□□□□□ -0.52
PPFIA1-206ENST00000526262 SRPK2P78362 688 aaKnown RBP11.78□□□□□ -0.52
PPFIA1-206ENST00000526262 AKNAQ7Z591 1439 aa11.78□□□□□ -0.52
PPFIA1-206ENST00000526262 RAPGEF3O95398 923 aa11.78□□□□□ -0.52
PPFIA1-206ENST00000526262 NCOA1Q15788 1441 aa11.78□□□□□ -0.52
PPFIA1-206ENST00000526262 EIF3AQ14152 1382 aaKnown RBP11.77□□□□□ -0.52
PPFIA1-206ENST00000526262 USP47Q96K76 1375 aa11.77□□□□□ -0.52
PPFIA1-206ENST00000526262 CFAP53Q96M91 514 aa11.77□□□□□ -0.53
PPFIA1-206ENST00000526262 VGFO15240 615 aaPredicted RBP11.76□□□□□ -0.53
PPFIA1-206ENST00000526262 CD109Q6YHK3 1445 aa11.76□□□□□ -0.53
PPFIA1-206ENST00000526262 STAC3Q96MF2 364 aa11.76□□□□□ -0.53
PPFIA1-206ENST00000526262 SAMD9Q5K651 1589 aa11.76□□□□□ -0.53
PPFIA1-206ENST00000526262 SENP3-EIF4A1A0A087X0R7 540 aa11.76□□□□□ -0.53
PPFIA1-206ENST00000526262 PTPRKQ15262 1439 aa11.75□□□□□ -0.53
PPFIA1-206ENST00000526262 CEP170Q5SW79 1584 aa11.74□□□□□ -0.53
PPFIA1-206ENST00000526262 TNNT2P45379 298 aaPredicted RBP11.74□□□□□ -0.53
PPFIA1-206ENST00000526262 TRAK1Q9UPV9 953 aa11.74□□□□□ -0.53
PPFIA1-206ENST00000526262 CFAP43Q8NDM7 1665 aa11.74□□□□□ -0.53
PPFIA1-206ENST00000526262 SCAF1Q9H7N4 1312 aaKnown RBP11.73□□□□□ -0.53
PPFIA1-206ENST00000526262 KTN1Q86UP2 1357 aaKnown RBP11.73□□□□□ -0.53
PPFIA1-206ENST00000526262 PPM1GO15355 546 aaPredicted RBP11.72□□□□□ -0.53
PPFIA1-206ENST00000526262 RALBP1Q15311 655 aa11.72□□□□□ -0.53
PPFIA1-206ENST00000526262 DAXXQ9UER7 740 aaPredicted RBP11.72□□□□□ -0.53
PPFIA1-206ENST00000526262 ADGRL1O94910 1474 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms