RNA–Protein interactions for RNA: ENST00000525812.1

RPUSD4-202, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 3

Gene RPUSD4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-202ENST00000525812 TTC37Q6PGP7 1564 aa12.41□□□□□ -0.42
RPUSD4-202ENST00000525812 SETD1BQ9UPS6 1966 aaKnown RBP12.41□□□□□ -0.42
RPUSD4-202ENST00000525812 HECW1Q76N89 1606 aa12.4□□□□□ -0.42
RPUSD4-202ENST00000525812 C9orf84Q5VXU9 1444 aa12.39□□□□□ -0.43
RPUSD4-202ENST00000525812 FMN1Q68DA7 1419 aa12.37□□□□□ -0.43
RPUSD4-202ENST00000525812 MLECQ14165 292 aa12.37□□□□□ -0.43
RPUSD4-202ENST00000525812 SIGLEC1Q9BZZ2 1709 aa12.37□□□□□ -0.43
RPUSD4-202ENST00000525812 ZNF518AQ6AHZ1 1483 aa12.36□□□□□ -0.43
RPUSD4-202ENST00000525812 PTPRTO14522 1441 aa12.36□□□□□ -0.43
RPUSD4-202ENST00000525812 AFAP1Q8N556 730 aa12.35□□□□□ -0.43
RPUSD4-202ENST00000525812 REREQ9P2R6 1566 aa12.35□□□□□ -0.43
RPUSD4-202ENST00000525812 MLH3Q9UHC1 1453 aa12.34□□□□□ -0.43
RPUSD4-202ENST00000525812 RANGAP1P46060 587 aaPredicted RBP12.34□□□□□ -0.43
RPUSD4-202ENST00000525812 CEBPAP49715 358 aaPredicted RBP12.34□□□□□ -0.43
RPUSD4-202ENST00000525812 TROQ12816 1431 aaPredicted RBP12.34□□□□□ -0.43
RPUSD4-202ENST00000525812 AGLP35573 1532 aa12.33□□□□□ -0.44
RPUSD4-202ENST00000525812 KDM5CP41229 1560 aa12.33□□□□□ -0.44
RPUSD4-202ENST00000525812 CDK13Q14004 1512 aaKnown RBP12.32□□□□□ -0.44
RPUSD4-202ENST00000525812 UHRF1BP1Q6BDS2 1440 aa12.32□□□□□ -0.44
RPUSD4-202ENST00000525812 TRAPPC8Q9Y2L5 1435 aa12.32□□□□□ -0.44
RPUSD4-202ENST00000525812 SOCS7O14512 581 aa12.32□□□□□ -0.44
RPUSD4-202ENST00000525812 FER1L4A9Z1Z3 1794 aa12.32□□□□□ -0.44
RPUSD4-202ENST00000525812 PREX1Q8TCU6 1659 aa12.32□□□□□ -0.44
RPUSD4-202ENST00000525812 IQSEC2Q5JU85 1478 aa12.3□□□□□ -0.44
RPUSD4-202ENST00000525812 PLPPR3Q6T4P5 718 aa12.3□□□□□ -0.44
RPUSD4-202ENST00000525812 STRCQ7RTU9 1775 aa12.3□□□□□ -0.44
RPUSD4-202ENST00000525812 CNTLNQ9NXG0 1405 aa12.28□□□□□ -0.44
RPUSD4-202ENST00000525812 ARHGAP35Q9NRY4 1499 aa12.28□□□□□ -0.44
RPUSD4-202ENST00000525812 ILDR2Q71H61 639 aa12.28□□□□□ -0.44
RPUSD4-202ENST00000525812 CLIP1P30622 1438 aa12.28□□□□□ -0.44
RPUSD4-202ENST00000525812 UBTFP17480 764 aaKnown RBP12.27□□□□□ -0.45
RPUSD4-202ENST00000525812 MYO5CQ9NQX4 1742 aa12.26□□□□□ -0.45
RPUSD4-202ENST00000525812 NPATQ14207 1427 aa12.26□□□□□ -0.45
RPUSD4-202ENST00000525812 ESF1Q9H501 851 aaKnown RBP12.25□□□□□ -0.45
RPUSD4-202ENST00000525812 PPP6R1Q9UPN7 881 aa12.25□□□□□ -0.45
RPUSD4-202ENST00000525812 DISP3Q9P2K9 1392 aa12.25□□□□□ -0.45
RPUSD4-202ENST00000525812 DIP2CQ9Y2E4 1556 aa12.25□□□□□ -0.45
RPUSD4-202ENST00000525812 ARHGAP5Q13017 1502 aa12.24□□□□□ -0.45
RPUSD4-202ENST00000525812 KIF14Q15058 1648 aa12.24□□□□□ -0.45
RPUSD4-202ENST00000525812 NCOA1Q15788 1441 aa12.24□□□□□ -0.45
RPUSD4-202ENST00000525812 LTBP4Q8N2S1 1624 aa12.24□□□□□ -0.45
RPUSD4-202ENST00000525812 ATP1B4Q9UN42 357 aaPredicted RBP12.24□□□□□ -0.45
RPUSD4-202ENST00000525812 ZMYM3Q14202 1370 aa12.21□□□□□ -0.45
RPUSD4-202ENST00000525812 PKD2Q13563 968 aa12.21□□□□□ -0.45
RPUSD4-202ENST00000525812 MYT1LQ9UL68 1186 aa12.21□□□□□ -0.45
RPUSD4-202ENST00000525812 CASKIN1Q8WXD9 1431 aa12.2□□□□□ -0.46
RPUSD4-202ENST00000525812 KIAA1107Q9UPP5 1409 aa12.2□□□□□ -0.46
RPUSD4-202ENST00000525812 ABCC1P33527 1531 aa12.2□□□□□ -0.46
RPUSD4-202ENST00000525812 C3P01024 1663 aa12.19□□□□□ -0.46
RPUSD4-202ENST00000525812 CDC42BPBQ9Y5S2 1711 aa12.19□□□□□ -0.46
RPUSD4-202ENST00000525812 CCDC18Q5T9S5 1454 aa12.19□□□□□ -0.46
RPUSD4-202ENST00000525812 ABCA6Q8N139 1617 aa12.19□□□□□ -0.46
RPUSD4-202ENST00000525812 PLA2R1Q13018 1463 aa12.17□□□□□ -0.46
RPUSD4-202ENST00000525812 KIDINS220Q9ULH0 1771 aa12.17□□□□□ -0.46
RPUSD4-202ENST00000525812 PREX2Q70Z35 1606 aa12.16□□□□□ -0.46
RPUSD4-202ENST00000525812 SPAG9O60271 1321 aaKnown RBP12.15□□□□□ -0.46
RPUSD4-202ENST00000525812 MROH2AA6NES4 1674 aa12.15□□□□□ -0.46
RPUSD4-202ENST00000525812 GPATCH8Q9UKJ3 1502 aaKnown RBP12.14□□□□□ -0.47
RPUSD4-202ENST00000525812 TCOF1Q13428 1488 aaKnown RBP12.14□□□□□ -0.47
RPUSD4-202ENST00000525812 PLEKHH2Q8IVE3 1493 aa12.14□□□□□ -0.47
RPUSD4-202ENST00000525812 SAMD9LQ8IVG5 1584 aa12.13□□□□□ -0.47
RPUSD4-202ENST00000525812 PTPRKQ15262 1439 aa12.13□□□□□ -0.47
RPUSD4-202ENST00000525812 HNRNPMP52272 730 aaKnown RBP eCLIP12.13□□□□□ -0.47
RPUSD4-202ENST00000525812 CHIC1Q5VXU3 224 aa12.13□□□□□ -0.47
RPUSD4-202ENST00000525812 NCKAP5LQ9HCH0 1330 aa12.12□□□□□ -0.47
RPUSD4-202ENST00000525812 CAMSAP1Q5T5Y3 1602 aa12.12□□□□□ -0.47
RPUSD4-202ENST00000525812 ITSN2Q9NZM3 1697 aa12.12□□□□□ -0.47
RPUSD4-202ENST00000525812 LRRIQ1Q96JM4 1722 aa12.11□□□□□ -0.47
RPUSD4-202ENST00000525812 CFDP1Q9UEE9 299 aaPredicted RBP12.11□□□□□ -0.47
RPUSD4-202ENST00000525812 ZNF335Q9H4Z2 1342 aaPredicted RBP12.11□□□□□ -0.47
RPUSD4-202ENST00000525812 SPATA31D1Q6ZQQ2 1576 aa12.1□□□□□ -0.47
RPUSD4-202ENST00000525812 A2MP01023 1474 aa12.1□□□□□ -0.47
RPUSD4-202ENST00000525812 FYCO1Q9BQS8 1478 aa12.1□□□□□ -0.47
RPUSD4-202ENST00000525812 UBAP1LF5GYI3 381 aa12.1□□□□□ -0.47
RPUSD4-202ENST00000525812 PLXNC1O60486 1568 aa12.09□□□□□ -0.47
RPUSD4-202ENST00000525812 RTEL1-TNFRSF6BF6WH68 1400 aa12.09□□□□□ -0.47
RPUSD4-202ENST00000525812 CDC42BPAQ5VT25 1732 aa12.08□□□□□ -0.47
RPUSD4-202ENST00000525812 RSPH4AQ5TD94 716 aa12.08□□□□□ -0.48
RPUSD4-202ENST00000525812 ZNF777Q9ULD5 760 aaPredicted RBP12.08□□□□□ -0.48
RPUSD4-202ENST00000525812 GGT6Q6P531 493 aa12.07□□□□□ -0.48
RPUSD4-202ENST00000525812 ATP7AQ04656 1500 aa12.06□□□□□ -0.48
RPUSD4-202ENST00000525812 DHX29Q7Z478 1369 aaKnown RBP12.06□□□□□ -0.48
RPUSD4-202ENST00000525812 TOM1O60784 492 aa12.06□□□□□ -0.48
RPUSD4-202ENST00000525812 MBD5Q9P267 1494 aa12.06□□□□□ -0.48
RPUSD4-202ENST00000525812 ZNF142P52746 1687 aaPredicted RBP12.06□□□□□ -0.48
RPUSD4-202ENST00000525812 SYCP2Q9BX26 1530 aa12.06□□□□□ -0.48
RPUSD4-202ENST00000525812 CCNB3Q8WWL7 1395 aa12.05□□□□□ -0.48
RPUSD4-202ENST00000525812 A2ML1A8K2U0 1454 aa12.05□□□□□ -0.48
RPUSD4-202ENST00000525812 CEP170BQ9Y4F5 1589 aaPredicted RBP12.05□□□□□ -0.48
RPUSD4-202ENST00000525812 EHMT2Q96KQ7 1210 aa12.04□□□□□ -0.48
RPUSD4-202ENST00000525812 INO80Q9ULG1 1556 aaPredicted RBP12.04□□□□□ -0.48
RPUSD4-202ENST00000525812 FAM135AQ9P2D6 1515 aa12.03□□□□□ -0.48
RPUSD4-202ENST00000525812 THEMISQ8N1K5 641 aaPredicted RBP12.03□□□□□ -0.48
RPUSD4-202ENST00000525812 ANKLE2Q86XL3 938 aa12.02□□□□□ -0.49
RPUSD4-202ENST00000525812 CPS1P31327 1500 aa12.01□□□□□ -0.49
RPUSD4-202ENST00000525812 MYO3AQ8NEV4 1616 aa12□□□□□ -0.49
RPUSD4-202ENST00000525812 SUPT6HQ7KZ85 1726 aaKnown RBP12□□□□□ -0.49
RPUSD4-202ENST00000525812 ZNF644Q9H582 1327 aaPredicted RBP12□□□□□ -0.49
RPUSD4-202ENST00000525812 MTUS2Q5JR59 1369 aa12□□□□□ -0.49
RPUSD4-202ENST00000525812 MED14O60244 1454 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms