RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 ZNF771Q7L3S4 317 aaPredicted RBP17.28■□□□□ 0.36
LRRK1-202ENST00000525284 HTATSF1O43719 755 aaKnown RBP17.27■□□□□ 0.36
LRRK1-202ENST00000525284 KIAA1211Q6ZU35 1233 aa17.27■□□□□ 0.36
LRRK1-202ENST00000525284 U2SURPO15042 1029 aaKnown RBP17.27■□□□□ 0.36
LRRK1-202ENST00000525284 CCAR2Q8N163 923 aaKnown RBP17.26■□□□□ 0.35
LRRK1-202ENST00000525284 RBM19Q9Y4C8 960 aaKnown RBP17.25■□□□□ 0.35
LRRK1-202ENST00000525284 WWC1Q8IX03 1113 aa17.25■□□□□ 0.35
LRRK1-202ENST00000525284 RASSF8Q8NHQ8 419 aa17.24■□□□□ 0.35
LRRK1-202ENST00000525284 RRP12Q5JTH9 1297 aaKnown RBP17.23■□□□□ 0.35
LRRK1-202ENST00000525284 CC2D1BQ5T0F9 858 aaKnown RBP17.22■□□□□ 0.35
LRRK1-202ENST00000525284 CDCA8Q53HL2 280 aa17.21■□□□□ 0.34
LRRK1-202ENST00000525284 RRP7BPQ9NSQ0 103 aa17.2■□□□□ 0.34
LRRK1-202ENST00000525284 PES1O00541 588 aaKnown RBP17.19■□□□□ 0.34
LRRK1-202ENST00000525284 CFAP44Q96MT7 982 aa17.19■□□□□ 0.34
LRRK1-202ENST00000525284 CALD1Q05682 793 aaKnown RBP17.18■□□□□ 0.34
LRRK1-202ENST00000525284 FOXD4L1Q9NU39 408 aa17.18■□□□□ 0.34
LRRK1-202ENST00000525284 CCDC34Q96HJ3 373 aa17.17■□□□□ 0.34
LRRK1-202ENST00000525284 NOL8Q76FK4 1167 aaKnown RBP17.16■□□□□ 0.34
LRRK1-202ENST00000525284 CARD11Q9BXL7 1154 aa17.15■□□□□ 0.34
LRRK1-202ENST00000525284 APPP05067 770 aa17.15■□□□□ 0.34
LRRK1-202ENST00000525284 GPS2Q13227 327 aa17.15■□□□□ 0.34
LRRK1-202ENST00000525284 RSPH6AQ9H0K4 717 aa17.15■□□□□ 0.34
LRRK1-202ENST00000525284 CCDC180Q9P1Z9 1646 aa17.12■□□□□ 0.33
LRRK1-202ENST00000525284 SOX12O15370 315 aa17.12■□□□□ 0.33
LRRK1-202ENST00000525284 FOXD4L5Q5VV16 416 aaPredicted RBP17.12■□□□□ 0.33
LRRK1-202ENST00000525284 FOXD4L4Q8WXT5 416 aaPredicted RBP17.12■□□□□ 0.33
LRRK1-202ENST00000525284 MFAP1P55081 439 aaKnown RBP17.12■□□□□ 0.33
LRRK1-202ENST00000525284 POGKQ9P215 609 aa17.11■□□□□ 0.33
LRRK1-202ENST00000525284 ZNF592Q92610 1267 aa17.11■□□□□ 0.33
LRRK1-202ENST00000525284 CSPP1Q1MSJ5 1256 aa17.1■□□□□ 0.33
LRRK1-202ENST00000525284 VPS53Q5VIR6 699 aa17.1■□□□□ 0.33
LRRK1-202ENST00000525284 TPD52L1Q16890 204 aaPredicted RBP17.09■□□□□ 0.33
LRRK1-202ENST00000525284 CCDC70Q6NSX1 233 aa17.09■□□□□ 0.33
LRRK1-202ENST00000525284 TSR1Q2NL82 804 aaKnown RBP17.08■□□□□ 0.33
LRRK1-202ENST00000525284 TIMELESSQ9UNS1 1208 aa17.08■□□□□ 0.33
LRRK1-202ENST00000525284 MARCH6O60337 910 aa17.07■□□□□ 0.32
LRRK1-202ENST00000525284 ZNF330Q9Y3S2 320 aaPredicted RBP17.07■□□□□ 0.32
LRRK1-202ENST00000525284 PHF14O94880 888 aa17.06■□□□□ 0.32
LRRK1-202ENST00000525284 TEX35Q5T0J7 233 aa17.06■□□□□ 0.32
LRRK1-202ENST00000525284 MTUS2Q5JR59 1369 aa17.06■□□□□ 0.32
LRRK1-202ENST00000525284 SF3A1Q15459 793 aaKnown RBP17.05■□□□□ 0.32
LRRK1-202ENST00000525284 TRIM6-TRIM34B2RNG4 842 aa17.04■□□□□ 0.32
LRRK1-202ENST00000525284 GORABQ5T7V8 394 aa17.04■□□□□ 0.32
LRRK1-202ENST00000525284 FAM13BQ9NYF5 915 aa17.04■□□□□ 0.32
LRRK1-202ENST00000525284 ITPRIPQ8IWB1 547 aa17.03■□□□□ 0.32
LRRK1-202ENST00000525284 MAP7D2Q96T17 732 aa17.02■□□□□ 0.32
LRRK1-202ENST00000525284 RTF1Q92541 710 aaKnown RBP17.02■□□□□ 0.32
LRRK1-202ENST00000525284 GOLGA6L19H0YKK7 550 aa17.01■□□□□ 0.31
LRRK1-202ENST00000525284 TOMM22Q9NS69 142 aa17■□□□□ 0.31
LRRK1-202ENST00000525284 NOM1Q5C9Z4 860 aaKnown RBP17■□□□□ 0.31
LRRK1-202ENST00000525284 RWDD1Q9H446 243 aaPredicted RBP17■□□□□ 0.31
LRRK1-202ENST00000525284 CHMP3Q9Y3E7 222 aa17■□□□□ 0.31
LRRK1-202ENST00000525284 PLCD4Q9BRC7 762 aa17■□□□□ 0.31
LRRK1-202ENST00000525284 KCNH8Q96L42 1107 aa16.99■□□□□ 0.31
LRRK1-202ENST00000525284 TPM1P09493 284 aa16.99■□□□□ 0.31
LRRK1-202ENST00000525284 TCERG1O14776 1098 aaKnown RBP16.98■□□□□ 0.31
LRRK1-202ENST00000525284 IPO8O15397 1037 aaKnown RBP16.98■□□□□ 0.31
LRRK1-202ENST00000525284 IPO9Q96P70 1041 aaKnown RBP16.98■□□□□ 0.31
LRRK1-202ENST00000525284 FOXD4L6Q3SYB3 417 aaPredicted RBP16.98■□□□□ 0.31
LRRK1-202ENST00000525284 FOXD4L3Q6VB84 417 aaPredicted RBP16.98■□□□□ 0.31
LRRK1-202ENST00000525284 BECN2A8MW95 431 aa16.98■□□□□ 0.31
LRRK1-202ENST00000525284 TPM2P07951 284 aa16.98■□□□□ 0.31
LRRK1-202ENST00000525284 PCMTD1Q96MG8 357 aaPredicted RBP16.97■□□□□ 0.31
LRRK1-202ENST00000525284 KIF16BQ96L93 1317 aa16.96■□□□□ 0.31
LRRK1-202ENST00000525284 HMMRO75330 724 aa16.95■□□□□ 0.3
LRRK1-202ENST00000525284 GPATCH3Q96I76 525 aa16.95■□□□□ 0.3
LRRK1-202ENST00000525284 BCL11BQ9C0K0 894 aaPredicted RBP16.95■□□□□ 0.3
LRRK1-202ENST00000525284 TMX4Q9H1E5 349 aaPredicted RBP16.95■□□□□ 0.3
LRRK1-202ENST00000525284 RUFY1Q96T51 708 aa16.94■□□□□ 0.3
LRRK1-202ENST00000525284 H3BQV1 296 aa16.94■□□□□ 0.3
LRRK1-202ENST00000525284 IFFO2Q5TF58 517 aa16.94■□□□□ 0.3
LRRK1-202ENST00000525284 CCDC191Q8NCU4 936 aa16.93■□□□□ 0.3
LRRK1-202ENST00000525284 HOMER1Q86YM7 354 aa16.93■□□□□ 0.3
LRRK1-202ENST00000525284 DDX49Q9Y6V7 483 aaKnown RBP16.92■□□□□ 0.3
LRRK1-202ENST00000525284 DDX11L8A8MPP1 907 aa16.92■□□□□ 0.3
LRRK1-202ENST00000525284 MORC1Q86VD1 984 aa16.92■□□□□ 0.3
LRRK1-202ENST00000525284 AK7Q96M32 723 aa16.92■□□□□ 0.3
LRRK1-202ENST00000525284 CNKSR2Q8WXI2 1034 aa16.91■□□□□ 0.3
LRRK1-202ENST00000525284 H0YHG0 523 aa16.91■□□□□ 0.3
LRRK1-202ENST00000525284 IPO7O95373 1038 aaKnown RBP16.9■□□□□ 0.3
LRRK1-202ENST00000525284 G3V3G9 751 aa16.9■□□□□ 0.3
LRRK1-202ENST00000525284 ST18O60284 1047 aa16.9■□□□□ 0.3
LRRK1-202ENST00000525284 DCAF8Q5TAQ9 597 aa16.9■□□□□ 0.3
LRRK1-202ENST00000525284 RDXP35241 583 aaKnown RBP16.9■□□□□ 0.3
LRRK1-202ENST00000525284 RSF1Q96T23 1441 aaPredicted RBP16.9■□□□□ 0.3
LRRK1-202ENST00000525284 CDR1P51861 262 aa16.9■□□□□ 0.3
LRRK1-202ENST00000525284 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.9■□□□□ 0.3
LRRK1-202ENST00000525284 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.9■□□□□ 0.3
LRRK1-202ENST00000525284 HSP90AB3PQ58FF7 597 aa16.89■□□□□ 0.29
LRRK1-202ENST00000525284 CCDC9Q9Y3X0 531 aaKnown RBP16.88■□□□□ 0.29
LRRK1-202ENST00000525284 PMFBP1Q8TBY8 1022 aa16.88■□□□□ 0.29
LRRK1-202ENST00000525284 KIF3AQ9Y496 699 aa16.88■□□□□ 0.29
LRRK1-202ENST00000525284 SRPK2P78362 688 aaKnown RBP16.88■□□□□ 0.29
LRRK1-202ENST00000525284 RCAN3Q9UKA8 241 aa16.88■□□□□ 0.29
LRRK1-202ENST00000525284 FAM184AQ8NB25 1140 aa16.87■□□□□ 0.29
LRRK1-202ENST00000525284 TMF1P82094 1093 aa16.86■□□□□ 0.29
LRRK1-202ENST00000525284 SAFB2Q14151 953 aaKnown RBP eCLIP16.86■□□□□ 0.29
LRRK1-202ENST00000525284 GSE1Q14687 1217 aa16.86■□□□□ 0.29
LRRK1-202ENST00000525284 NAP1L1P55209 391 aaKnown RBP16.85■□□□□ 0.29
LRRK1-202ENST00000525284 MCTP1Q6DN14 999 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms