RNA–Protein interactions for RNA: ENST00000525276.1

CTTN-209, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-209ENST00000525276 FER1L4A9Z1Z3 1794 aa18.68■□□□□ 0.58
CTTN-209ENST00000525276 PLCH2O75038 1416 aa18.66■□□□□ 0.58
CTTN-209ENST00000525276 ARHGEF12Q9NZN5 1544 aa18.66■□□□□ 0.58
CTTN-209ENST00000525276 SCAPERQ9BY12 1400 aa18.65■□□□□ 0.58
CTTN-209ENST00000525276 PLPPR3Q6T4P5 718 aa18.64■□□□□ 0.57
CTTN-209ENST00000525276 MLECQ14165 292 aa18.61■□□□□ 0.57
CTTN-209ENST00000525276 ATP10AO60312 1499 aa18.6■□□□□ 0.57
CTTN-209ENST00000525276 CERKQ8TCT0 537 aa18.6■□□□□ 0.57
CTTN-209ENST00000525276 KIF14Q15058 1648 aa18.6■□□□□ 0.57
CTTN-209ENST00000525276 C9orf84Q5VXU9 1444 aa18.58■□□□□ 0.57
CTTN-209ENST00000525276 STRCQ7RTU9 1775 aa18.58■□□□□ 0.56
CTTN-209ENST00000525276 MYO5CQ9NQX4 1742 aa18.57■□□□□ 0.56
CTTN-209ENST00000525276 PREX1Q8TCU6 1659 aa18.57■□□□□ 0.56
CTTN-209ENST00000525276 ARHGAP35Q9NRY4 1499 aa18.56■□□□□ 0.56
CTTN-209ENST00000525276 KDM5CP41229 1560 aa18.55■□□□□ 0.56
CTTN-209ENST00000525276 CEBPAP49715 358 aaPredicted RBP18.54■□□□□ 0.56
CTTN-209ENST00000525276 LRRIQ1Q96JM4 1722 aa18.53■□□□□ 0.56
CTTN-209ENST00000525276 DIP2CQ9Y2E4 1556 aa18.51■□□□□ 0.55
CTTN-209ENST00000525276 FMN1Q68DA7 1419 aa18.51■□□□□ 0.55
CTTN-209ENST00000525276 EFCAB2Q5VUJ9 269 aa18.51■□□□□ 0.55
CTTN-209ENST00000525276 ZNF518AQ6AHZ1 1483 aa18.51■□□□□ 0.55
CTTN-209ENST00000525276 AFAP1Q8N556 730 aa18.5■□□□□ 0.55
CTTN-209ENST00000525276 REREQ9P2R6 1566 aa18.49■□□□□ 0.55
CTTN-209ENST00000525276 ABCA6Q8N139 1617 aa18.49■□□□□ 0.55
CTTN-209ENST00000525276 TROQ12816 1431 aaPredicted RBP18.49■□□□□ 0.55
CTTN-209ENST00000525276 CDC42BPBQ9Y5S2 1711 aa18.47■□□□□ 0.55
CTTN-209ENST00000525276 SETD1BQ9UPS6 1966 aaKnown RBP18.47■□□□□ 0.55
CTTN-209ENST00000525276 ARHGAP5Q13017 1502 aa18.47■□□□□ 0.55
CTTN-209ENST00000525276 CLIP1P30622 1438 aa18.47■□□□□ 0.55
CTTN-209ENST00000525276 C3P01024 1663 aa18.45■□□□□ 0.54
CTTN-209ENST00000525276 MLH3Q9UHC1 1453 aa18.44■□□□□ 0.54
CTTN-209ENST00000525276 UHRF1BP1Q6BDS2 1440 aa18.43■□□□□ 0.54
CTTN-209ENST00000525276 ILDR2Q71H61 639 aa18.43■□□□□ 0.54
CTTN-209ENST00000525276 TRAPPC8Q9Y2L5 1435 aa18.42■□□□□ 0.54
CTTN-209ENST00000525276 ATP1B4Q9UN42 357 aaPredicted RBP18.42■□□□□ 0.54
CTTN-209ENST00000525276 ABCC1P33527 1531 aa18.42■□□□□ 0.54
CTTN-209ENST00000525276 AGLP35573 1532 aa18.42■□□□□ 0.54
CTTN-209ENST00000525276 CDK11AQ9UQ88 783 aaPredicted RBP18.4■□□□□ 0.54
CTTN-209ENST00000525276 PREX2Q70Z35 1606 aa18.4■□□□□ 0.54
CTTN-209ENST00000525276 LTBP4Q8N2S1 1624 aa18.4■□□□□ 0.54
CTTN-209ENST00000525276 ITSN2Q9NZM3 1697 aa18.39■□□□□ 0.53
CTTN-209ENST00000525276 LOC105371045A0A1W2PR82 267 aa18.39■□□□□ 0.53
CTTN-209ENST00000525276 KIDINS220Q9ULH0 1771 aa18.39■□□□□ 0.53
CTTN-209ENST00000525276 PTPRTO14522 1441 aa18.39■□□□□ 0.53
CTTN-209ENST00000525276 CEP162Q5TB80 1403 aa18.38■□□□□ 0.53
CTTN-209ENST00000525276 DMRT2Q9Y5R5 561 aa18.37■□□□□ 0.53
CTTN-209ENST00000525276 CASKIN1Q8WXD9 1431 aa18.36■□□□□ 0.53
CTTN-209ENST00000525276 CDC42BPAQ5VT25 1732 aa18.35■□□□□ 0.53
CTTN-209ENST00000525276 NCOA1Q15788 1441 aa18.34■□□□□ 0.53
CTTN-209ENST00000525276 DISP3Q9P2K9 1392 aa18.34■□□□□ 0.53
CTTN-209ENST00000525276 SAMD9LQ8IVG5 1584 aa18.31■□□□□ 0.52
CTTN-209ENST00000525276 FYCO1Q9BQS8 1478 aa18.31■□□□□ 0.52
CTTN-209ENST00000525276 CCDC18Q5T9S5 1454 aa18.29■□□□□ 0.52
CTTN-209ENST00000525276 SOCS7O14512 581 aa18.29■□□□□ 0.52
CTTN-209ENST00000525276 SPATA31D1Q6ZQQ2 1576 aa18.29■□□□□ 0.52
CTTN-209ENST00000525276 MYT1LQ9UL68 1186 aa18.28■□□□□ 0.52
CTTN-209ENST00000525276 CNTLNQ9NXG0 1405 aa18.28■□□□□ 0.52
CTTN-209ENST00000525276 MROH2AA6NES4 1674 aa18.28■□□□□ 0.52
CTTN-209ENST00000525276 IQSEC2Q5JU85 1478 aa18.27■□□□□ 0.52
CTTN-209ENST00000525276 CAMSAP1Q5T5Y3 1602 aa18.27■□□□□ 0.51
CTTN-209ENST00000525276 NPATQ14207 1427 aa18.26■□□□□ 0.51
CTTN-209ENST00000525276 SYCP2Q9BX26 1530 aa18.25■□□□□ 0.51
CTTN-209ENST00000525276 PLXNC1O60486 1568 aa18.25■□□□□ 0.51
CTTN-209ENST00000525276 GPATCH8Q9UKJ3 1502 aaKnown RBP18.23■□□□□ 0.51
CTTN-209ENST00000525276 ZMYM3Q14202 1370 aa18.23■□□□□ 0.51
CTTN-209ENST00000525276 INO80Q9ULG1 1556 aaPredicted RBP18.21■□□□□ 0.51
CTTN-209ENST00000525276 SUPT6HQ7KZ85 1726 aaKnown RBP18.21■□□□□ 0.51
CTTN-209ENST00000525276 ZNF142P52746 1687 aaPredicted RBP18.21■□□□□ 0.51
CTTN-209ENST00000525276 CLTCQ00610 1675 aaKnown RBP18.2■□□□□ 0.5
CTTN-209ENST00000525276 ESF1Q9H501 851 aaKnown RBP18.2■□□□□ 0.5
CTTN-209ENST00000525276 MYO3AQ8NEV4 1616 aa18.2■□□□□ 0.5
CTTN-209ENST00000525276 ATP7AQ04656 1500 aa18.19■□□□□ 0.5
CTTN-209ENST00000525276 TCOF1Q13428 1488 aaKnown RBP18.19■□□□□ 0.5
CTTN-209ENST00000525276 NCKAP5LQ9HCH0 1330 aa18.19■□□□□ 0.5
CTTN-209ENST00000525276 PTPRKQ15262 1439 aa18.18■□□□□ 0.5
CTTN-209ENST00000525276 HNRNPMP52272 730 aaKnown RBP eCLIP18.18■□□□□ 0.51e-6■■□□□ 11.4
CTTN-209ENST00000525276 ZNF335Q9H4Z2 1342 aaPredicted RBP18.18■□□□□ 0.5
CTTN-209ENST00000525276 KIAA1107Q9UPP5 1409 aa18.17■□□□□ 0.5
CTTN-209ENST00000525276 PLA2R1Q13018 1463 aa18.17■□□□□ 0.5
CTTN-209ENST00000525276 SPAG9O60271 1321 aaKnown RBP18.17■□□□□ 0.5
CTTN-209ENST00000525276 VPS8Q8N3P4 1428 aa18.16■□□□□ 0.5
CTTN-209ENST00000525276 ZNF777Q9ULD5 760 aaPredicted RBP18.16■□□□□ 0.5
CTTN-209ENST00000525276 CEP170BQ9Y4F5 1589 aaPredicted RBP18.16■□□□□ 0.5
CTTN-209ENST00000525276 A2MP01023 1474 aa18.15■□□□□ 0.5
CTTN-209ENST00000525276 MTUS2Q5JR59 1369 aa18.11■□□□□ 0.49
CTTN-209ENST00000525276 PKD2Q13563 968 aa18.1■□□□□ 0.49
CTTN-209ENST00000525276 PLEKHH2Q8IVE3 1493 aa18.09■□□□□ 0.49
CTTN-209ENST00000525276 MBD5Q9P267 1494 aa18.09■□□□□ 0.49
CTTN-209ENST00000525276 ADGBQ8N7X0 1667 aa18.08■□□□□ 0.48
CTTN-209ENST00000525276 DNMT1P26358 1616 aaKnown RBP18.08■□□□□ 0.48
CTTN-209ENST00000525276 ZNF644Q9H582 1327 aaPredicted RBP18.07■□□□□ 0.48
CTTN-209ENST00000525276 UBAP1LF5GYI3 381 aa18.07■□□□□ 0.48
CTTN-209ENST00000525276 CFDP1Q9UEE9 299 aaPredicted RBP18.07■□□□□ 0.48
CTTN-209ENST00000525276 TIAM1Q13009 1591 aa18.07■□□□□ 0.48
CTTN-209ENST00000525276 NEURL4Q96JN8 1562 aa18.06■□□□□ 0.48
CTTN-209ENST00000525276 GGT6Q6P531 493 aa18.06■□□□□ 0.48
CTTN-209ENST00000525276 EHBP1L1Q8N3D4 1523 aa18.06■□□□□ 0.48
CTTN-209ENST00000525276 A2ML1A8K2U0 1454 aa18.06■□□□□ 0.48
CTTN-209ENST00000525276 CCNB3Q8WWL7 1395 aa18.05■□□□□ 0.48
CTTN-209ENST00000525276 PPP6R1Q9UPN7 881 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms