RNA–Protein interactions for RNA: ENST00000524827.5

CSTF3-206, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3 BASIC

Gene CSTF3, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-206ENST00000524827 FER1L4A9Z1Z3 1794 aa23.09■■□□□ 1.29
CSTF3-206ENST00000524827 MLECQ14165 292 aa23.08■■□□□ 1.29
CSTF3-206ENST00000524827 MYO5CQ9NQX4 1742 aa23.07■■□□□ 1.28
CSTF3-206ENST00000524827 FMN1Q68DA7 1419 aa23.07■■□□□ 1.28
CSTF3-206ENST00000524827 ATP1B4Q9UN42 357 aaPredicted RBP23.04■■□□□ 1.28
CSTF3-206ENST00000524827 ATP10AO60312 1499 aa23.04■■□□□ 1.28
CSTF3-206ENST00000524827 ARHGAP35Q9NRY4 1499 aa23.04■■□□□ 1.28
CSTF3-206ENST00000524827 ARHGEF12Q9NZN5 1544 aa23.03■■□□□ 1.28
CSTF3-206ENST00000524827 C9orf84Q5VXU9 1444 aa23.03■■□□□ 1.28
CSTF3-206ENST00000524827 EHMT2Q96KQ7 1210 aa23.03■■□□□ 1.28
CSTF3-206ENST00000524827 KIF14Q15058 1648 aa23.03■■□□□ 1.28
CSTF3-206ENST00000524827 UBTFP17480 764 aaKnown RBP23.02■■□□□ 1.28
CSTF3-206ENST00000524827 EFCAB2Q5VUJ9 269 aa23.02■■□□□ 1.28
CSTF3-206ENST00000524827 CDK11AQ9UQ88 783 aaPredicted RBP22.99■■□□□ 1.27
CSTF3-206ENST00000524827 TROQ12816 1431 aaPredicted RBP22.98■■□□□ 1.27
CSTF3-206ENST00000524827 ZNF518AQ6AHZ1 1483 aa22.98■■□□□ 1.27
CSTF3-206ENST00000524827 ARHGAP5Q13017 1502 aa22.96■■□□□ 1.27
CSTF3-206ENST00000524827 KDM5CP41229 1560 aa22.96■■□□□ 1.27
CSTF3-206ENST00000524827 PREX1Q8TCU6 1659 aa22.95■■□□□ 1.26
CSTF3-206ENST00000524827 CLIP1P30622 1438 aa22.93■■□□□ 1.26
CSTF3-206ENST00000524827 LRRIQ1Q96JM4 1722 aa22.93■■□□□ 1.26
CSTF3-206ENST00000524827 AFAP1Q8N556 730 aa22.92■■□□□ 1.26
CSTF3-206ENST00000524827 CERKQ8TCT0 537 aa22.92■■□□□ 1.26
CSTF3-206ENST00000524827 CEBPAP49715 358 aaPredicted RBP22.91■■□□□ 1.26
CSTF3-206ENST00000524827 DIP2CQ9Y2E4 1556 aa22.9■■□□□ 1.26
CSTF3-206ENST00000524827 REREQ9P2R6 1566 aa22.87■■□□□ 1.25
CSTF3-206ENST00000524827 CDC42BPBQ9Y5S2 1711 aa22.87■■□□□ 1.25
CSTF3-206ENST00000524827 ABCA6Q8N139 1617 aa22.86■■□□□ 1.25
CSTF3-206ENST00000524827 MYT1LQ9UL68 1186 aa22.86■■□□□ 1.25
CSTF3-206ENST00000524827 PREX2Q70Z35 1606 aa22.85■■□□□ 1.25
CSTF3-206ENST00000524827 MLH3Q9UHC1 1453 aa22.84■■□□□ 1.25
CSTF3-206ENST00000524827 UHRF1BP1Q6BDS2 1440 aa22.83■■□□□ 1.25
CSTF3-206ENST00000524827 ABCC1P33527 1531 aa22.83■■□□□ 1.25
CSTF3-206ENST00000524827 STRCQ7RTU9 1775 aa22.83■■□□□ 1.24
CSTF3-206ENST00000524827 TRAPPC8Q9Y2L5 1435 aa22.82■■□□□ 1.24
CSTF3-206ENST00000524827 CHIC1Q5VXU3 224 aa22.81■■□□□ 1.24
CSTF3-206ENST00000524827 SETD1BQ9UPS6 1966 aaKnown RBP22.81■■□□□ 1.24
CSTF3-206ENST00000524827 AGLP35573 1532 aa22.8■■□□□ 1.24
CSTF3-206ENST00000524827 ITSN2Q9NZM3 1697 aa22.8■■□□□ 1.24
CSTF3-206ENST00000524827 CCDC18Q5T9S5 1454 aa22.79■■□□□ 1.24
CSTF3-206ENST00000524827 C3P01024 1663 aa22.79■■□□□ 1.24
CSTF3-206ENST00000524827 CASKIN1Q8WXD9 1431 aa22.79■■□□□ 1.24
CSTF3-206ENST00000524827 DMRT2Q9Y5R5 561 aa22.77■■□□□ 1.24
CSTF3-206ENST00000524827 CDC42BPAQ5VT25 1732 aa22.74■■□□□ 1.23
CSTF3-206ENST00000524827 KIDINS220Q9ULH0 1771 aa22.74■■□□□ 1.23
CSTF3-206ENST00000524827 ESF1Q9H501 851 aaKnown RBP22.71■■□□□ 1.23
CSTF3-206ENST00000524827 PTPRTO14522 1441 aa22.7■■□□□ 1.22
CSTF3-206ENST00000524827 FYCO1Q9BQS8 1478 aa22.69■■□□□ 1.22
CSTF3-206ENST00000524827 CNTLNQ9NXG0 1405 aa22.69■■□□□ 1.22
CSTF3-206ENST00000524827 SAMD9LQ8IVG5 1584 aa22.68■■□□□ 1.22
CSTF3-206ENST00000524827 SYCP2Q9BX26 1530 aa22.66■■□□□ 1.22
CSTF3-206ENST00000524827 ZNF777Q9ULD5 760 aaPredicted RBP22.64■■□□□ 1.21
CSTF3-206ENST00000524827 NCOA1Q15788 1441 aa22.64■■□□□ 1.21
CSTF3-206ENST00000524827 MROH2AA6NES4 1674 aa22.63■■□□□ 1.21
CSTF3-206ENST00000524827 GPATCH8Q9UKJ3 1502 aaKnown RBP22.62■■□□□ 1.21
CSTF3-206ENST00000524827 LTBP4Q8N2S1 1624 aa22.61■■□□□ 1.21
CSTF3-206ENST00000524827 SPAG9O60271 1321 aaKnown RBP22.6■■□□□ 1.21
CSTF3-206ENST00000524827 NPATQ14207 1427 aa22.6■■□□□ 1.21
CSTF3-206ENST00000524827 ATP7AQ04656 1500 aa22.59■■□□□ 1.21
CSTF3-206ENST00000524827 DISP3Q9P2K9 1392 aa22.59■■□□□ 1.21
CSTF3-206ENST00000524827 SUPT6HQ7KZ85 1726 aaKnown RBP22.59■■□□□ 1.21
CSTF3-206ENST00000524827 HNRNPMP52272 730 aaKnown RBP eCLIP22.58■■□□□ 1.21
CSTF3-206ENST00000524827 INO80Q9ULG1 1556 aaPredicted RBP22.57■■□□□ 1.2
CSTF3-206ENST00000524827 CAMSAP1Q5T5Y3 1602 aa22.57■■□□□ 1.2
CSTF3-206ENST00000524827 PLXNC1O60486 1568 aa22.56■■□□□ 1.2
CSTF3-206ENST00000524827 ZMYM3Q14202 1370 aa22.56■■□□□ 1.2
CSTF3-206ENST00000524827 KIAA1107Q9UPP5 1409 aa22.56■■□□□ 1.2
CSTF3-206ENST00000524827 PLEKHH2Q8IVE3 1493 aa22.55■■□□□ 1.2
CSTF3-206ENST00000524827 IQSEC2Q5JU85 1478 aa22.54■■□□□ 1.2
CSTF3-206ENST00000524827 CLTCQ00610 1675 aaKnown RBP22.54■■□□□ 1.2
CSTF3-206ENST00000524827 A2MP01023 1474 aa22.54■■□□□ 1.2
CSTF3-206ENST00000524827 CFDP1Q9UEE9 299 aaPredicted RBP22.53■■□□□ 1.2
CSTF3-206ENST00000524827 CCNB3Q8WWL7 1395 aa22.52■■□□□ 1.2
CSTF3-206ENST00000524827 ILDR2Q71H61 639 aa22.52■■□□□ 1.2
CSTF3-206ENST00000524827 MYO3AQ8NEV4 1616 aa22.51■■□□□ 1.19
CSTF3-206ENST00000524827 ZNF142P52746 1687 aaPredicted RBP22.5■■□□□ 1.19
CSTF3-206ENST00000524827 SPATA31D1Q6ZQQ2 1576 aa22.49■■□□□ 1.19
CSTF3-206ENST00000524827 NCKAP5LQ9HCH0 1330 aa22.48■■□□□ 1.19
CSTF3-206ENST00000524827 MTUS2Q5JR59 1369 aa22.48■■□□□ 1.19
CSTF3-206ENST00000524827 PTPRKQ15262 1439 aa22.48■■□□□ 1.19
CSTF3-206ENST00000524827 CEP170BQ9Y4F5 1589 aaPredicted RBP22.46■■□□□ 1.19
CSTF3-206ENST00000524827 PLA2R1Q13018 1463 aa22.46■■□□□ 1.19
CSTF3-206ENST00000524827 ADGBQ8N7X0 1667 aa22.46■■□□□ 1.19
CSTF3-206ENST00000524827 GGT6Q6P531 493 aa22.45■■□□□ 1.18
CSTF3-206ENST00000524827 TIAM1Q13009 1591 aa22.45■■□□□ 1.18
CSTF3-206ENST00000524827 ZNF335Q9H4Z2 1342 aaPredicted RBP22.44■■□□□ 1.18
CSTF3-206ENST00000524827 TCOF1Q13428 1488 aaKnown RBP22.42■■□□□ 1.18
CSTF3-206ENST00000524827 ZNF644Q9H582 1327 aaPredicted RBP22.42■■□□□ 1.18
CSTF3-206ENST00000524827 SOCS7O14512 581 aa22.42■■□□□ 1.18
CSTF3-206ENST00000524827 PKD2Q13563 968 aa22.41■■□□□ 1.18
CSTF3-206ENST00000524827 EHBP1L1Q8N3D4 1523 aa22.41■■□□□ 1.18
CSTF3-206ENST00000524827 MBD5Q9P267 1494 aa22.41■■□□□ 1.18
CSTF3-206ENST00000524827 PPP6R1Q9UPN7 881 aa22.39■■□□□ 1.17
CSTF3-206ENST00000524827 RTEL1-TNFRSF6BF6WH68 1400 aa22.36■■□□□ 1.17
CSTF3-206ENST00000524827 CEP162Q5TB80 1403 aa22.36■■□□□ 1.17
CSTF3-206ENST00000524827 A2ML1A8K2U0 1454 aa22.35■■□□□ 1.17
CSTF3-206ENST00000524827 UBAP1LF5GYI3 381 aa22.35■■□□□ 1.17
CSTF3-206ENST00000524827 DHX29Q7Z478 1369 aaKnown RBP22.34■■□□□ 1.17
CSTF3-206ENST00000524827 DNMT1P26358 1616 aaKnown RBP22.33■■□□□ 1.17
CSTF3-206ENST00000524827 CCDC141Q6ZP82 1450 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms