RNA–Protein interactions for RNA: ENST00000524465.5

GEN1-203, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

TSL 4

Gene GEN1, Length 593 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-203ENST00000524465 RIMBP2O15034 1052 aa9.6□□□□□ -0.87
GEN1-203ENST00000524465 ZNF710Q8N1W2 664 aa9.6□□□□□ -0.87
GEN1-203ENST00000524465 KIF3CO14782 793 aa9.58□□□□□ -0.88
GEN1-203ENST00000524465 PPP1R37O75864 691 aa9.58□□□□□ -0.88
GEN1-203ENST00000524465 EMP3P54852 163 aa9.58□□□□□ -0.88
GEN1-203ENST00000524465 MARVELD3Q96A59 401 aa9.58□□□□□ -0.88
GEN1-203ENST00000524465 ZSWIM6Q9HCJ5 1215 aa9.58□□□□□ -0.88
GEN1-203ENST00000524465 NKX1-1Q15270 411 aaPredicted RBP9.57□□□□□ -0.88
GEN1-203ENST00000524465 CDAN1Q8IWY9 1227 aa9.57□□□□□ -0.88
GEN1-203ENST00000524465 HOXB1P14653 301 aaPredicted RBP9.56□□□□□ -0.88
GEN1-203ENST00000524465 C2orf72A6NCS6 295 aa9.54□□□□□ -0.88
GEN1-203ENST00000524465 TMC2Q8TDI7 906 aa9.54□□□□□ -0.88
GEN1-203ENST00000524465 DCAF8L2P0C7V8 631 aa9.53□□□□□ -0.88
GEN1-203ENST00000524465 GPR153Q6NV75 609 aa9.5□□□□□ -0.89
GEN1-203ENST00000524465 PLSCR2Q9NRY7 297 aa9.5□□□□□ -0.89
GEN1-203ENST00000524465 FAM205CA6NFA0 338 aa9.49□□□□□ -0.89
GEN1-203ENST00000524465 HS3ST6Q96QI5 342 aa9.49□□□□□ -0.89
GEN1-203ENST00000524465 SLC34A2O95436 690 aa9.48□□□□□ -0.89
GEN1-203ENST00000524465 GTPBP6O43824 516 aaPredicted RBP9.47□□□□□ -0.89
GEN1-203ENST00000524465 GPHNQ9NQX3 736 aaPredicted RBP9.46□□□□□ -0.9
GEN1-203ENST00000524465 POTEB3A0JP26 581 aa9.45□□□□□ -0.9
GEN1-203ENST00000524465 POTEBQ6S5H4 581 aa9.45□□□□□ -0.9
GEN1-203ENST00000524465 ERBB3P21860 1342 aa9.45□□□□□ -0.9
GEN1-203ENST00000524465 FOXK1P85037 733 aa9.44□□□□□ -0.9
GEN1-203ENST00000524465 ARSIQ5FYB1 569 aa9.43□□□□□ -0.9
GEN1-203ENST00000524465 CRISPLD2Q9H0B8 497 aa9.4□□□□□ -0.9
GEN1-203ENST00000524465 VARS2Q5ST30 1063 aaKnown RBP9.39□□□□□ -0.91
GEN1-203ENST00000524465 PLPP6Q8IY26 295 aa9.39□□□□□ -0.91
GEN1-203ENST00000524465 PCDHGA4Q9Y5G9 962 aa9.39□□□□□ -0.91
GEN1-203ENST00000524465 DSG2Q14126 1118 aa9.38□□□□□ -0.91
GEN1-203ENST00000524465 PTCD2Q8WV60 388 aaKnown RBP9.38□□□□□ -0.91
GEN1-203ENST00000524465 BBXQ8WY36 941 aaPredicted RBP9.38□□□□□ -0.91
GEN1-203ENST00000524465 KRTAP3-3Q9BYR6 98 aa9.38□□□□□ -0.91
GEN1-203ENST00000524465 KRTAP3-2Q9BYR7 98 aa9.38□□□□□ -0.91
GEN1-203ENST00000524465 ZNF316A6NFI3 1004 aaPredicted RBP9.37□□□□□ -0.91
GEN1-203ENST00000524465 KHSRPQ92945 711 aaKnown RBP eCLIP9.37□□□□□ -0.911e-7■■■□□ 15.6
GEN1-203ENST00000524465 PDE4AP27815 886 aa9.36□□□□□ -0.91
GEN1-203ENST00000524465 ZNF687Q8N1G0 1237 aa9.36□□□□□ -0.91
GEN1-203ENST00000524465 NUDT7P0C024 238 aa9.35□□□□□ -0.91
GEN1-203ENST00000524465 SPNS2Q8IVW8 549 aa9.34□□□□□ -0.91
GEN1-203ENST00000524465 NCKAP5LQ9HCH0 1330 aa9.33□□□□□ -0.92
GEN1-203ENST00000524465 TBC1D12O60347 775 aa9.32□□□□□ -0.92
GEN1-203ENST00000524465 PPP1R15BQ5SWA1 713 aa9.32□□□□□ -0.92
GEN1-203ENST00000524465 PSDA5PKW4 1024 aaPredicted RBP9.31□□□□□ -0.92
GEN1-203ENST00000524465 KDM4FA0A1W2PPD8 638 aa9.3□□□□□ -0.92
GEN1-203ENST00000524465 PLCB2Q00722 1185 aa9.3□□□□□ -0.92
GEN1-203ENST00000524465 LHX6Q9UPM6 363 aa9.3□□□□□ -0.92
GEN1-203ENST00000524465 MFSD10Q14728 455 aa9.29□□□□□ -0.92
GEN1-203ENST00000524465 OXER1Q8TDS5 423 aa9.29□□□□□ -0.92
GEN1-203ENST00000524465 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.29□□□□□ -0.92
GEN1-203ENST00000524465 DDX27Q96GQ7 796 aaKnown RBP9.28□□□□□ -0.92
GEN1-203ENST00000524465 LARP6Q9BRS8 491 aaKnown RBP9.28□□□□□ -0.92
GEN1-203ENST00000524465 PBX2P40425 430 aa9.27□□□□□ -0.93
GEN1-203ENST00000524465 MMRN1Q13201 1228 aa9.27□□□□□ -0.93
GEN1-203ENST00000524465 SPRYD3Q8NCJ5 442 aa9.27□□□□□ -0.93
GEN1-203ENST00000524465 CADPS2Q86UW7 1296 aa9.24□□□□□ -0.93
GEN1-203ENST00000524465 UPF1Q92900 1129 aaKnown RBP eCLIP9.22□□□□□ -0.93
GEN1-203ENST00000524465 PTGER2P43116 358 aa9.21□□□□□ -0.94
GEN1-203ENST00000524465 HAP1P54257 671 aaPredicted RBP9.21□□□□□ -0.94
GEN1-203ENST00000524465 LSM11P83369 360 aaKnown RBP eCLIP9.2□□□□□ -0.94
GEN1-203ENST00000524465 PPP4R3BQ5MIZ7 849 aa9.2□□□□□ -0.94
GEN1-203ENST00000524465 ANO8Q9HCE9 1232 aaPredicted RBP9.18□□□□□ -0.94
GEN1-203ENST00000524465 ARHGAP33O14559 1287 aa9.17□□□□□ -0.94
GEN1-203ENST00000524465 POTEEQ6S8J3 1075 aa9.17□□□□□ -0.94
GEN1-203ENST00000524465 BCANQ96GW7 911 aa9.17□□□□□ -0.94
GEN1-203ENST00000524465 CAMK2BQ13554 666 aa9.16□□□□□ -0.94
GEN1-203ENST00000524465 ANKRD13DQ6ZTN6 518 aa9.16□□□□□ -0.94
GEN1-203ENST00000524465 PAXIP1Q6ZW49 1069 aaPredicted RBP9.16□□□□□ -0.94
GEN1-203ENST00000524465 EVI5O60447 810 aa9.15□□□□□ -0.94
GEN1-203ENST00000524465 MAP3K9P80192 1104 aa9.15□□□□□ -0.94
GEN1-203ENST00000524465 EMILIN3Q9NT22 766 aa9.15□□□□□ -0.94
GEN1-203ENST00000524465 CFAP44Q96MT7 982 aa9.14□□□□□ -0.95
GEN1-203ENST00000524465 AXIN2Q9Y2T1 843 aa9.14□□□□□ -0.95
GEN1-203ENST00000524465 FOSBP53539 338 aa9.13□□□□□ -0.95
GEN1-203ENST00000524465 JPH4Q96JJ6 628 aa9.13□□□□□ -0.95
GEN1-203ENST00000524465 MYT1LQ9UL68 1186 aa9.13□□□□□ -0.95
GEN1-203ENST00000524465 ZNF454Q8N9F8 522 aa9.12□□□□□ -0.95
GEN1-203ENST00000524465 KCNH8Q96L42 1107 aa9.12□□□□□ -0.95
GEN1-203ENST00000524465 TK2O00142 265 aa9.11□□□□□ -0.95
GEN1-203ENST00000524465 RNF166Q96A37 237 aaPredicted RBP9.11□□□□□ -0.95
GEN1-203ENST00000524465 BCL2L12Q9HB09 334 aa9.1□□□□□ -0.95
GEN1-203ENST00000524465 ADGRD1Q6QNK2 874 aa9.09□□□□□ -0.95
GEN1-203ENST00000524465 PSEN2P49810 448 aa9.08□□□□□ -0.96
GEN1-203ENST00000524465 ZDHHC16Q969W1 377 aa9.07□□□□□ -0.96
GEN1-203ENST00000524465 KCNK17Q96T54 332 aa9.07□□□□□ -0.96
GEN1-203ENST00000524465 DMRTA1Q5VZB9 504 aa9.06□□□□□ -0.96
GEN1-203ENST00000524465 VSIG10Q8N0Z9 540 aa9.06□□□□□ -0.96
GEN1-203ENST00000524465 DPYSL4O14531 572 aa9.05□□□□□ -0.96
GEN1-203ENST00000524465 PTPREP23469 700 aa9.05□□□□□ -0.96
GEN1-203ENST00000524465 SLC4A5Q9BY07 1137 aa9.05□□□□□ -0.96
GEN1-203ENST00000524465 E2F4Q16254 413 aa9.04□□□□□ -0.96
GEN1-203ENST00000524465 WDR70Q9NW82 654 aa9.04□□□□□ -0.96
GEN1-203ENST00000524465 HRO43593 1189 aa9.03□□□□□ -0.96
GEN1-203ENST00000524465 PHF14O94880 888 aa9.03□□□□□ -0.96
GEN1-203ENST00000524465 FBXW7Q969H0 707 aa9.03□□□□□ -0.96
GEN1-203ENST00000524465 ARIH1Q9Y4X5 557 aaPredicted RBP9.03□□□□□ -0.96
GEN1-203ENST00000524465 PCDHGA10Q9Y5H3 936 aa9.03□□□□□ -0.96
GEN1-203ENST00000524465 TYW1BQ6NUM6 668 aa9.02□□□□□ -0.97
GEN1-203ENST00000524465 ADAM33Q9BZ11 813 aa9.02□□□□□ -0.97
GEN1-203ENST00000524465 SPDYE16A6NNV3 312 aaPredicted RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms