RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 PPM1GO15355 546 aaPredicted RBP13.72□□□□□ -0.21
SPIDR-224ENST00000524126 CHMP7Q8WUX9 453 aaPredicted RBP13.72□□□□□ -0.21
SPIDR-224ENST00000524126 ZBED9Q6R2W3 1325 aa13.71□□□□□ -0.21
SPIDR-224ENST00000524126 PODXL2Q9NZ53 605 aa13.7□□□□□ -0.22
SPIDR-224ENST00000524126 SENP3-EIF4A1A0A087X0R7 540 aa13.69□□□□□ -0.22
SPIDR-224ENST00000524126 GRIN2AQ12879 1464 aa13.69□□□□□ -0.22
SPIDR-224ENST00000524126 NFKBIBQ15653 356 aa13.67□□□□□ -0.22
SPIDR-224ENST00000524126 MRS2Q9HD23 443 aa13.67□□□□□ -0.22
SPIDR-224ENST00000524126 IQGAP2Q13576 1575 aa13.67□□□□□ -0.22
SPIDR-224ENST00000524126 SAMD9Q5K651 1589 aa13.66□□□□□ -0.22
SPIDR-224ENST00000524126 CEP170Q5SW79 1584 aa13.66□□□□□ -0.22
SPIDR-224ENST00000524126 GLIPR1L2Q4G1C9 344 aa13.66□□□□□ -0.22
SPIDR-224ENST00000524126 FAM43AQ8N2R8 423 aa13.66□□□□□ -0.22
SPIDR-224ENST00000524126 DCAF11Q8TEB1 546 aa13.66□□□□□ -0.22
SPIDR-224ENST00000524126 TONSLQ96HA7 1378 aa13.66□□□□□ -0.22
SPIDR-224ENST00000524126 PDE4AP27815 886 aa13.65□□□□□ -0.22
SPIDR-224ENST00000524126 LRRIQ1Q96JM4 1722 aa13.65□□□□□ -0.22
SPIDR-224ENST00000524126 TIAM1Q13009 1591 aa13.65□□□□□ -0.22
SPIDR-224ENST00000524126 EFCAB5A4FU69 1503 aa13.64□□□□□ -0.23
SPIDR-224ENST00000524126 SLC4A3P48751 1232 aa13.64□□□□□ -0.23
SPIDR-224ENST00000524126 FAM50AQ14320 339 aaKnown RBP13.64□□□□□ -0.23
SPIDR-224ENST00000524126 SYNJ2O15056 1496 aa13.63□□□□□ -0.23
SPIDR-224ENST00000524126 MAGI1Q96QZ7 1491 aaPredicted RBP13.63□□□□□ -0.23
SPIDR-224ENST00000524126 PRKRIP1Q9H875 184 aaPredicted RBP13.6□□□□□ -0.23
SPIDR-224ENST00000524126 HSPA5P11021 654 aaKnown RBP13.6□□□□□ -0.23
SPIDR-224ENST00000524126 BACH2Q9BYV9 841 aa13.6□□□□□ -0.23
SPIDR-224ENST00000524126 LRRC9Q6ZRR7 1453 aa13.6□□□□□ -0.23
SPIDR-224ENST00000524126 SMG6Q86US8 1419 aaKnown RBP13.6□□□□□ -0.23
SPIDR-224ENST00000524126 PHLDB1Q86UU1 1377 aa13.6□□□□□ -0.23
SPIDR-224ENST00000524126 DISP1Q96F81 1524 aa13.6□□□□□ -0.23
SPIDR-224ENST00000524126 RRAGDQ9NQL2 400 aaPredicted RBP13.6□□□□□ -0.23
SPIDR-224ENST00000524126 CASKIN1Q8WXD9 1431 aa13.59□□□□□ -0.23
SPIDR-224ENST00000524126 KIAA0586Q9BVV6 1533 aa13.59□□□□□ -0.23
SPIDR-224ENST00000524126 RNF123Q5XPI4 1314 aa13.59□□□□□ -0.23
SPIDR-224ENST00000524126 NUDCQ9Y266 331 aa13.59□□□□□ -0.23
SPIDR-224ENST00000524126 FMN1Q68DA7 1419 aa13.58□□□□□ -0.24
SPIDR-224ENST00000524126 FYCO1Q9BQS8 1478 aa13.57□□□□□ -0.24
SPIDR-224ENST00000524126 CNTLNQ9NXG0 1405 aa13.57□□□□□ -0.24
SPIDR-224ENST00000524126 TCERG1O14776 1098 aaKnown RBP13.57□□□□□ -0.24
SPIDR-224ENST00000524126 CNGB1Q14028 1251 aaPredicted RBP13.57□□□□□ -0.24
SPIDR-224ENST00000524126 SKAP1Q86WV1 359 aa13.57□□□□□ -0.24
SPIDR-224ENST00000524126 CHD1O14646 1710 aa13.56□□□□□ -0.24
SPIDR-224ENST00000524126 CFAP43Q8NDM7 1665 aa13.56□□□□□ -0.24
SPIDR-224ENST00000524126 CDK13Q14004 1512 aaKnown RBP13.56□□□□□ -0.24
SPIDR-224ENST00000524126 JPH4Q96JJ6 628 aa13.56□□□□□ -0.24
SPIDR-224ENST00000524126 KIAA0556O60303 1618 aa13.55□□□□□ -0.24
SPIDR-224ENST00000524126 UGGT2Q9NYU1 1516 aa13.55□□□□□ -0.24
SPIDR-224ENST00000524126 MAGI3Q5TCQ9 1506 aa13.54□□□□□ -0.24
SPIDR-224ENST00000524126 FRAT2O75474 233 aaPredicted RBP13.54□□□□□ -0.24
SPIDR-224ENST00000524126 EXOC6Q8TAG9 804 aa13.54□□□□□ -0.24
SPIDR-224ENST00000524126 DAXXQ9UER7 740 aaPredicted RBP13.54□□□□□ -0.24
SPIDR-224ENST00000524126 NUP160Q12769 1436 aa13.53□□□□□ -0.24
SPIDR-224ENST00000524126 NCOA2Q15596 1464 aa13.52□□□□□ -0.25
SPIDR-224ENST00000524126 HSP90AA2PQ14568 343 aaPredicted RBP13.52□□□□□ -0.25
SPIDR-224ENST00000524126 DDRGK1Q96HY6 314 aa13.51□□□□□ -0.25
SPIDR-224ENST00000524126 NAP1L5Q96NT1 182 aaPredicted RBP13.51□□□□□ -0.25
SPIDR-224ENST00000524126 PLB1Q6P1J6 1458 aa13.51□□□□□ -0.25
SPIDR-224ENST00000524126 MTUS2Q5JR59 1369 aa13.51□□□□□ -0.25
SPIDR-224ENST00000524126 KDM5BQ9UGL1 1544 aa13.5□□□□□ -0.25
SPIDR-224ENST00000524126 MAP3K1Q13233 1512 aa13.49□□□□□ -0.25
SPIDR-224ENST00000524126 ERCC6L2Q5T890 1561 aa13.47□□□□□ -0.25
SPIDR-224ENST00000524126 EPRSP07814 1512 aaKnown RBP13.47□□□□□ -0.25
SPIDR-224ENST00000524126 MS4A1P11836 297 aa13.47□□□□□ -0.25
SPIDR-224ENST00000524126 A0A0U1RQG5 324 aaPredicted RBP13.45□□□□□ -0.26
SPIDR-224ENST00000524126 EIF4G2P78344 907 aaKnown RBP eCLIP13.45□□□□□ -0.263e-6■■■□□ 18.8
SPIDR-224ENST00000524126 NUP153P49790 1475 aaKnown RBP13.45□□□□□ -0.26
SPIDR-224ENST00000524126 PRG4Q92954 1404 aaPredicted RBP13.45□□□□□ -0.26
SPIDR-224ENST00000524126 HSP90AA1P07900 732 aaKnown RBP13.45□□□□□ -0.26
SPIDR-224ENST00000524126 CCDC7Q96M83 1385 aa13.45□□□□□ -0.26
SPIDR-224ENST00000524126 RRP1P56182 461 aaKnown RBP13.44□□□□□ -0.26
SPIDR-224ENST00000524126 RRP9O43818 475 aaKnown RBP13.44□□□□□ -0.26
SPIDR-224ENST00000524126 ARXQ96QS3 562 aa13.44□□□□□ -0.26
SPIDR-224ENST00000524126 POGKQ9P215 609 aa13.44□□□□□ -0.26
SPIDR-224ENST00000524126 HECW1Q76N89 1606 aa13.44□□□□□ -0.26
SPIDR-224ENST00000524126 RAPGEF6Q8TEU7 1601 aa13.42□□□□□ -0.26
SPIDR-224ENST00000524126 CCDC18Q5T9S5 1454 aa13.4□□□□□ -0.26
SPIDR-224ENST00000524126 PNNQ9H307 717 aaKnown RBP13.4□□□□□ -0.26
SPIDR-224ENST00000524126 NCOA1Q15788 1441 aa13.4□□□□□ -0.26
SPIDR-224ENST00000524126 ARID4BQ4LE39 1312 aaPredicted RBP13.4□□□□□ -0.27
SPIDR-224ENST00000524126 CARMIL2Q6F5E8 1435 aa13.39□□□□□ -0.27
SPIDR-224ENST00000524126 FGD6Q6ZV73 1430 aa13.39□□□□□ -0.27
SPIDR-224ENST00000524126 PTPRKQ15262 1439 aa13.38□□□□□ -0.27
SPIDR-224ENST00000524126 RBM10P98175 930 aaKnown RBP13.37□□□□□ -0.27
SPIDR-224ENST00000524126 SUPT6HQ7KZ85 1726 aaKnown RBP13.37□□□□□ -0.27
SPIDR-224ENST00000524126 EHBP1L1Q8N3D4 1523 aa13.37□□□□□ -0.27
SPIDR-224ENST00000524126 KIF7Q2M1P5 1343 aa13.37□□□□□ -0.27
SPIDR-224ENST00000524126 ZNF644Q9H582 1327 aaPredicted RBP13.37□□□□□ -0.27
SPIDR-224ENST00000524126 CHIC2Q9UKJ5 165 aa13.36□□□□□ -0.27
SPIDR-224ENST00000524126 UACAQ9BZF9 1416 aa13.36□□□□□ -0.27
SPIDR-224ENST00000524126 PLIN1O60240 522 aa13.35□□□□□ -0.27
SPIDR-224ENST00000524126 PTPRGP23470 1445 aa13.35□□□□□ -0.27
SPIDR-224ENST00000524126 RCAN3Q9UKA8 241 aa13.34□□□□□ -0.27
SPIDR-224ENST00000524126 MYOM3Q5VTT5 1437 aa13.34□□□□□ -0.27
SPIDR-224ENST00000524126 POLR3GLQ9BT43 218 aa13.33□□□□□ -0.28
SPIDR-224ENST00000524126 KIF14Q15058 1648 aa13.33□□□□□ -0.28
SPIDR-224ENST00000524126 ARHGEF11O15085 1522 aa13.32□□□□□ -0.28
SPIDR-224ENST00000524126 CLCN1P35523 988 aa13.32□□□□□ -0.28
SPIDR-224ENST00000524126 ABCA8O94911 1581 aa13.32□□□□□ -0.28
SPIDR-224ENST00000524126 ATP10BO94823 1461 aa13.31□□□□□ -0.28
SPIDR-224ENST00000524126 PANK2Q9BZ23 570 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms