RNA–Protein interactions for RNA: ENST00000523993.5

FAM49B-228, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-228ENST00000523993 FHOD3Q2V2M9 1422 aa9.99□□□□□ -0.81
FAM49B-228ENST00000523993 NEO1Q92859 1461 aa9.98□□□□□ -0.81
FAM49B-228ENST00000523993 KCNH8Q96L42 1107 aa9.98□□□□□ -0.81
FAM49B-228ENST00000523993 ATF5Q9Y2D1 282 aaPredicted RBP9.98□□□□□ -0.81
FAM49B-228ENST00000523993 ADGRL1O94910 1474 aa9.98□□□□□ -0.81
FAM49B-228ENST00000523993 CFAP74Q9C0B2 1584 aa9.95□□□□□ -0.82
FAM49B-228ENST00000523993 RICTORQ6R327 1708 aa9.94□□□□□ -0.82
FAM49B-228ENST00000523993 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.94□□□□□ -0.821e-6■■■■□ 22.1
FAM49B-228ENST00000523993 ARHGAP35Q9NRY4 1499 aa9.94□□□□□ -0.82
FAM49B-228ENST00000523993 FMN1Q68DA7 1419 aa9.94□□□□□ -0.82
FAM49B-228ENST00000523993 HECW1Q76N89 1606 aa9.93□□□□□ -0.82
FAM49B-228ENST00000523993 FRMPD1Q5SYB0 1578 aa9.93□□□□□ -0.82
FAM49B-228ENST00000523993 LRRIQ1Q96JM4 1722 aa9.93□□□□□ -0.82
FAM49B-228ENST00000523993 ZNF219Q9P2Y4 722 aaPredicted RBP9.92□□□□□ -0.82
FAM49B-228ENST00000523993 TTC37Q6PGP7 1564 aa9.92□□□□□ -0.82
FAM49B-228ENST00000523993 PLEKHD1A6NEE1 506 aa9.91□□□□□ -0.82
FAM49B-228ENST00000523993 ARID3CA6NKF2 412 aa9.91□□□□□ -0.82
FAM49B-228ENST00000523993 ADAMTSL3P82987 1691 aa9.9□□□□□ -0.82
FAM49B-228ENST00000523993 CDK13Q14004 1512 aaKnown RBP9.9□□□□□ -0.82
FAM49B-228ENST00000523993 ZMYM4Q5VZL5 1548 aa9.9□□□□□ -0.82
FAM49B-228ENST00000523993 MYO5CQ9NQX4 1742 aa9.9□□□□□ -0.83
FAM49B-228ENST00000523993 FANCAO15360 1455 aa9.89□□□□□ -0.83
FAM49B-228ENST00000523993 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.88□□□□□ -0.83
FAM49B-228ENST00000523993 UBTFP17480 764 aaKnown RBP9.88□□□□□ -0.83
FAM49B-228ENST00000523993 HNRNPUL2Q1KMD3 747 aaKnown RBP9.88□□□□□ -0.83
FAM49B-228ENST00000523993 AKNAQ7Z591 1439 aa9.88□□□□□ -0.83
FAM49B-228ENST00000523993 BCORL1Q5H9F3 1711 aa9.87□□□□□ -0.83
FAM49B-228ENST00000523993 ARHGEF40Q8TER5 1519 aa9.87□□□□□ -0.83
FAM49B-228ENST00000523993 RANGAP1P46060 587 aaPredicted RBP9.87□□□□□ -0.83
FAM49B-228ENST00000523993 PLCH2O75038 1416 aa9.87□□□□□ -0.83
FAM49B-228ENST00000523993 DENND4BO75064 1496 aaPredicted RBP9.86□□□□□ -0.83
FAM49B-228ENST00000523993 MAGI2Q86UL8 1455 aa9.85□□□□□ -0.83
FAM49B-228ENST00000523993 ABCB7O75027 752 aa9.85□□□□□ -0.83
FAM49B-228ENST00000523993 RAPGEF3O95398 923 aa9.85□□□□□ -0.83
FAM49B-228ENST00000523993 KIF14Q15058 1648 aa9.85□□□□□ -0.83
FAM49B-228ENST00000523993 TROQ12816 1431 aaPredicted RBP9.84□□□□□ -0.83
FAM49B-228ENST00000523993 CASKIN1Q8WXD9 1431 aa9.84□□□□□ -0.83
FAM49B-228ENST00000523993 CDC42BPBQ9Y5S2 1711 aa9.84□□□□□ -0.83
FAM49B-228ENST00000523993 CCDC18Q5T9S5 1454 aa9.84□□□□□ -0.83
FAM49B-228ENST00000523993 HECW2Q9P2P5 1572 aa9.84□□□□□ -0.83
FAM49B-228ENST00000523993 CDK11AQ9UQ88 783 aaPredicted RBP9.83□□□□□ -0.84
FAM49B-228ENST00000523993 PCF11O94913 1555 aaKnown RBP9.83□□□□□ -0.84
FAM49B-228ENST00000523993 SIGLEC1Q9BZZ2 1709 aa9.82□□□□□ -0.84
FAM49B-228ENST00000523993 PREX2Q70Z35 1606 aa9.82□□□□□ -0.84
FAM49B-228ENST00000523993 POGZQ7Z3K3 1410 aa9.82□□□□□ -0.84
FAM49B-228ENST00000523993 KDM5CP41229 1560 aa9.81□□□□□ -0.84
FAM49B-228ENST00000523993 FYCO1Q9BQS8 1478 aa9.81□□□□□ -0.84
FAM49B-228ENST00000523993 SAMD1Q6SPF0 538 aaPredicted RBP9.81□□□□□ -0.84
FAM49B-228ENST00000523993 RBM42Q9BTD8 480 aaKnown RBP9.81□□□□□ -0.84
FAM49B-228ENST00000523993 CDC42BPAQ5VT25 1732 aa9.81□□□□□ -0.84
FAM49B-228ENST00000523993 MADDQ8WXG6 1647 aa9.81□□□□□ -0.84
FAM49B-228ENST00000523993 ZFYVE16Q7Z3T8 1539 aa9.81□□□□□ -0.84
FAM49B-228ENST00000523993 CLIP1P30622 1438 aa9.81□□□□□ -0.84
FAM49B-228ENST00000523993 PTPRMP28827 1452 aa9.8□□□□□ -0.84
FAM49B-228ENST00000523993 PLCB2Q00722 1185 aa9.8□□□□□ -0.84
FAM49B-228ENST00000523993 SCAPERQ9BY12 1400 aa9.79□□□□□ -0.84
FAM49B-228ENST00000523993 ZNF518AQ6AHZ1 1483 aa9.79□□□□□ -0.84
FAM49B-228ENST00000523993 EFCAB2Q5VUJ9 269 aa9.78□□□□□ -0.84
FAM49B-228ENST00000523993 YEATS2Q9ULM3 1422 aa9.78□□□□□ -0.84
FAM49B-228ENST00000523993 REREQ9P2R6 1566 aa9.78□□□□□ -0.84
FAM49B-228ENST00000523993 RIMS1Q86UR5 1692 aaKnown RBP9.77□□□□□ -0.84
FAM49B-228ENST00000523993 ITSN2Q9NZM3 1697 aa9.77□□□□□ -0.84
FAM49B-228ENST00000523993 FER1L4A9Z1Z3 1794 aa9.77□□□□□ -0.85
FAM49B-228ENST00000523993 ARHGAP5Q13017 1502 aa9.77□□□□□ -0.85
FAM49B-228ENST00000523993 ATP10AO60312 1499 aa9.76□□□□□ -0.85
FAM49B-228ENST00000523993 ABCC1P33527 1531 aa9.76□□□□□ -0.85
FAM49B-228ENST00000523993 MLH3Q9UHC1 1453 aa9.75□□□□□ -0.85
FAM49B-228ENST00000523993 ARHGEF12Q9NZN5 1544 aa9.75□□□□□ -0.85
FAM49B-228ENST00000523993 SETD1BQ9UPS6 1966 aaKnown RBP9.75□□□□□ -0.85
FAM49B-228ENST00000523993 C9orf84Q5VXU9 1444 aa9.74□□□□□ -0.85
FAM49B-228ENST00000523993 FBXO3Q9UK99 471 aa9.74□□□□□ -0.85
FAM49B-228ENST00000523993 ATP1B4Q9UN42 357 aaPredicted RBP9.74□□□□□ -0.85
FAM49B-228ENST00000523993 DIP2CQ9Y2E4 1556 aa9.74□□□□□ -0.85
FAM49B-228ENST00000523993 KIDINS220Q9ULH0 1771 aa9.73□□□□□ -0.85
FAM49B-228ENST00000523993 LMTK3Q96Q04 1460 aa9.72□□□□□ -0.85
FAM49B-228ENST00000523993 ABCA6Q8N139 1617 aa9.72□□□□□ -0.85
FAM49B-228ENST00000523993 AGLP35573 1532 aa9.72□□□□□ -0.85
FAM49B-228ENST00000523993 SAMD9LQ8IVG5 1584 aa9.71□□□□□ -0.85
FAM49B-228ENST00000523993 ARID4BQ4LE39 1312 aaPredicted RBP9.71□□□□□ -0.86
FAM49B-228ENST00000523993 GPATCH8Q9UKJ3 1502 aaKnown RBP9.71□□□□□ -0.86
FAM49B-228ENST00000523993 HAP1P54257 671 aaPredicted RBP9.69□□□□□ -0.86
FAM49B-228ENST00000523993 AFAP1Q8N556 730 aa9.69□□□□□ -0.86
FAM49B-228ENST00000523993 PREX1Q8TCU6 1659 aa9.69□□□□□ -0.86
FAM49B-228ENST00000523993 KIAA1107Q9UPP5 1409 aa9.69□□□□□ -0.86
FAM49B-228ENST00000523993 TRAPPC8Q9Y2L5 1435 aa9.69□□□□□ -0.86
FAM49B-228ENST00000523993 EHBP1L1Q8N3D4 1523 aa9.68□□□□□ -0.86
FAM49B-228ENST00000523993 CEP162Q5TB80 1403 aa9.68□□□□□ -0.86
FAM49B-228ENST00000523993 PLEKHH2Q8IVE3 1493 aa9.67□□□□□ -0.86
FAM49B-228ENST00000523993 TIAM1Q13009 1591 aa9.67□□□□□ -0.86
FAM49B-228ENST00000523993 INO80Q9ULG1 1556 aaPredicted RBP9.67□□□□□ -0.86
FAM49B-228ENST00000523993 SYCP2Q9BX26 1530 aa9.66□□□□□ -0.86
FAM49B-228ENST00000523993 SPDYE4A6NLX3 237 aa9.66□□□□□ -0.86
FAM49B-228ENST00000523993 CHRDL2Q6WN34 429 aa9.66□□□□□ -0.86
FAM49B-228ENST00000523993 MROH2AA6NES4 1674 aa9.66□□□□□ -0.86
FAM49B-228ENST00000523993 C3P01024 1663 aa9.66□□□□□ -0.86
FAM49B-228ENST00000523993 PLXNC1O60486 1568 aa9.66□□□□□ -0.86
FAM49B-228ENST00000523993 ADGBQ8N7X0 1667 aa9.64□□□□□ -0.87
FAM49B-228ENST00000523993 MTUS2Q5JR59 1369 aa9.64□□□□□ -0.87
FAM49B-228ENST00000523993 VASPP50552 380 aaPredicted RBP9.64□□□□□ -0.87
FAM49B-228ENST00000523993 ATP7AQ04656 1500 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms