RNA–Protein interactions for RNA: ENST00000523768.5

TNPO1-213, Transcript of transportin 1, humanhuman

TSL 2 BASIC

Gene TNPO1, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-213ENST00000523768 ANP32CO43423 234 aa15.98■□□□□ 0.15
TNPO1-213ENST00000523768 SUPT16HQ9Y5B9 1047 aaKnown RBP15.98■□□□□ 0.15
TNPO1-213ENST00000523768 CHMP7Q8WUX9 453 aaPredicted RBP15.98■□□□□ 0.15
TNPO1-213ENST00000523768 NUP160Q12769 1436 aa15.96■□□□□ 0.15
TNPO1-213ENST00000523768 CARMIL2Q6F5E8 1435 aa15.94■□□□□ 0.14
TNPO1-213ENST00000523768 PRG4Q92954 1404 aaPredicted RBP15.94■□□□□ 0.14
TNPO1-213ENST00000523768 ZNF644Q9H582 1327 aaPredicted RBP15.94■□□□□ 0.14
TNPO1-213ENST00000523768 ADCY10Q96PN6 1610 aa15.94■□□□□ 0.14
TNPO1-213ENST00000523768 PLB1Q6P1J6 1458 aa15.93■□□□□ 0.14
TNPO1-213ENST00000523768 ITSN2Q9NZM3 1697 aa15.93■□□□□ 0.14
TNPO1-213ENST00000523768 ANKRD30BQ9BXX2 1392 aa15.93■□□□□ 0.14
TNPO1-213ENST00000523768 GPATCH8Q9UKJ3 1502 aaKnown RBP15.91■□□□□ 0.14
TNPO1-213ENST00000523768 CAMSAP2Q08AD1 1489 aa15.91■□□□□ 0.14
TNPO1-213ENST00000523768 RPRD2Q5VT52 1461 aaKnown RBP15.91■□□□□ 0.14
TNPO1-213ENST00000523768 JPH4Q96JJ6 628 aa15.91■□□□□ 0.14
TNPO1-213ENST00000523768 L3MBTL2Q969R5 705 aa15.89■□□□□ 0.13
TNPO1-213ENST00000523768 HSPA5P11021 654 aaKnown RBP15.89■□□□□ 0.13
TNPO1-213ENST00000523768 CFDP1Q9UEE9 299 aaPredicted RBP15.89■□□□□ 0.13
TNPO1-213ENST00000523768 ADGRL2O95490 1459 aa15.88■□□□□ 0.13
TNPO1-213ENST00000523768 EIF4G2P78344 907 aaKnown RBP eCLIP15.88■□□□□ 0.13
TNPO1-213ENST00000523768 KIF14Q15058 1648 aa15.87■□□□□ 0.13
TNPO1-213ENST00000523768 NCOA1Q15788 1441 aa15.87■□□□□ 0.13
TNPO1-213ENST00000523768 ADGBQ8N7X0 1667 aa15.87■□□□□ 0.13
TNPO1-213ENST00000523768 FBLN2P98095 1184 aa15.86■□□□□ 0.13
TNPO1-213ENST00000523768 FOXD1Q16676 465 aa15.86■□□□□ 0.13
TNPO1-213ENST00000523768 ABCA8O94911 1581 aa15.86■□□□□ 0.13
TNPO1-213ENST00000523768 WASHC2AQ641Q2 1341 aa15.86■□□□□ 0.13
TNPO1-213ENST00000523768 TEX14Q8IWB6 1497 aa15.86■□□□□ 0.13
TNPO1-213ENST00000523768 SLC4A1APQ9BWU0 796 aaKnown RBP15.85■□□□□ 0.13
TNPO1-213ENST00000523768 CROCC2H7BZ55 1655 aa15.85■□□□□ 0.13
TNPO1-213ENST00000523768 PZPP20742 1482 aa15.85■□□□□ 0.13
TNPO1-213ENST00000523768 ABCC10Q5T3U5 1492 aa15.81■□□□□ 0.12
TNPO1-213ENST00000523768 ATP10BO94823 1461 aa15.81■□□□□ 0.12
TNPO1-213ENST00000523768 PLEKHD1A6NEE1 506 aa15.81■□□□□ 0.12
TNPO1-213ENST00000523768 ANKRD30AQ9BXX3 1397 aa15.8■□□□□ 0.12
TNPO1-213ENST00000523768 NBPF8Q3BBV2 869 aa15.8■□□□□ 0.12
TNPO1-213ENST00000523768 CDC42BPAQ5VT25 1732 aa15.79■□□□□ 0.12
TNPO1-213ENST00000523768 CNTLNQ9NXG0 1405 aa15.79■□□□□ 0.12
TNPO1-213ENST00000523768 SHANK2Q9UPX8 1470 aa15.78■□□□□ 0.12
TNPO1-213ENST00000523768 KIAA1107Q9UPP5 1409 aa15.78■□□□□ 0.12
TNPO1-213ENST00000523768 ZNF777Q9ULD5 760 aaPredicted RBP15.78■□□□□ 0.12
TNPO1-213ENST00000523768 SPATA31E1Q6ZUB1 1445 aa15.78■□□□□ 0.12
TNPO1-213ENST00000523768 CCDC7Q96M83 1385 aa15.77■□□□□ 0.12
TNPO1-213ENST00000523768 ANKRD50Q9ULJ7 1429 aa15.75■□□□□ 0.11
TNPO1-213ENST00000523768 MBD5Q9P267 1494 aa15.74■□□□□ 0.11
TNPO1-213ENST00000523768 C11orf95C9JLR9 678 aaPredicted RBP15.74■□□□□ 0.11
TNPO1-213ENST00000523768 C9orf84Q5VXU9 1444 aa15.73■□□□□ 0.11
TNPO1-213ENST00000523768 FKBP8Q14318 412 aa15.73■□□□□ 0.11
TNPO1-213ENST00000523768 POLR1AO95602 1720 aaPredicted RBP15.72■□□□□ 0.11
TNPO1-213ENST00000523768 PTPRGP23470 1445 aa15.71■□□□□ 0.11
TNPO1-213ENST00000523768 ARHGEF5Q12774 1597 aa15.71■□□□□ 0.11
TNPO1-213ENST00000523768 PKD2Q13563 968 aa15.71■□□□□ 0.11
TNPO1-213ENST00000523768 KDM5DQ9BY66 1539 aa15.71■□□□□ 0.11
TNPO1-213ENST00000523768 NEFLP07196 543 aa15.69■□□□□ 0.1
TNPO1-213ENST00000523768 TSPY4P0CV99 314 aa15.68■□□□□ 0.1
TNPO1-213ENST00000523768 TSPY10P0CW01 314 aa15.68■□□□□ 0.1
TNPO1-213ENST00000523768 PRKRIP1Q9H875 184 aaPredicted RBP15.68■□□□□ 0.1
TNPO1-213ENST00000523768 KIF7Q2M1P5 1343 aa15.68■□□□□ 0.1
TNPO1-213ENST00000523768 NUP155O75694 1391 aa15.66■□□□□ 0.1
TNPO1-213ENST00000523768 HNRNPUQ00839 825 aaKnown RBP eCLIP15.66■□□□□ 0.1
TNPO1-213ENST00000523768 UHRF1BP1Q6BDS2 1440 aa15.66■□□□□ 0.1
TNPO1-213ENST00000523768 TSHZ2Q9NRE2 1034 aa15.65■□□□□ 0.1
TNPO1-213ENST00000523768 PREX2Q70Z35 1606 aa15.64■□□□□ 0.09
TNPO1-213ENST00000523768 KIF15Q9NS87 1388 aa15.64■□□□□ 0.09
TNPO1-213ENST00000523768 RSPH4AQ5TD94 716 aa15.64■□□□□ 0.09
TNPO1-213ENST00000523768 BCANQ96GW7 911 aa15.64■□□□□ 0.09
TNPO1-213ENST00000523768 ARHGEF12Q9NZN5 1544 aa15.63■□□□□ 0.09
TNPO1-213ENST00000523768 SAMD9LQ8IVG5 1584 aa15.63■□□□□ 0.09
TNPO1-213ENST00000523768 SHROOM2Q13796 1616 aa15.63■□□□□ 0.09
TNPO1-213ENST00000523768 CCDC141Q6ZP82 1450 aa15.63■□□□□ 0.09
TNPO1-213ENST00000523768 CDC42BPBQ9Y5S2 1711 aa15.63■□□□□ 0.09
TNPO1-213ENST00000523768 HNRNPMP52272 730 aaKnown RBP eCLIP15.63■□□□□ 0.099e-6■■■■□ 22.2
TNPO1-213ENST00000523768 CHD1O14646 1710 aa15.62■□□□□ 0.09
TNPO1-213ENST00000523768 ARID4BQ4LE39 1312 aaPredicted RBP15.62■□□□□ 0.09
TNPO1-213ENST00000523768 USP47Q96K76 1375 aa15.62■□□□□ 0.09
TNPO1-213ENST00000523768 CCDC184Q52MB2 194 aa15.62■□□□□ 0.09
TNPO1-213ENST00000523768 KDM5CP41229 1560 aa15.61■□□□□ 0.09
TNPO1-213ENST00000523768 RALGAPBQ86X10 1494 aa15.61■□□□□ 0.09
TNPO1-213ENST00000523768 BCORL1Q5H9F3 1711 aa15.59■□□□□ 0.09
TNPO1-213ENST00000523768 MAST1Q9Y2H9 1570 aa15.58■□□□□ 0.09
TNPO1-213ENST00000523768 MRS2Q9HD23 443 aa15.57■□□□□ 0.08
TNPO1-213ENST00000523768 DHX29Q7Z478 1369 aaKnown RBP15.57■□□□□ 0.08
TNPO1-213ENST00000523768 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.55■□□□□ 0.08
TNPO1-213ENST00000523768 FAM135AQ9P2D6 1515 aa15.55■□□□□ 0.08
TNPO1-213ENST00000523768 MYT1Q01538 1121 aa15.55■□□□□ 0.08
TNPO1-213ENST00000523768 ZNF326Q5BKZ1 582 aaKnown RBP15.55■□□□□ 0.08
TNPO1-213ENST00000523768 ABCC2Q92887 1545 aa15.55■□□□□ 0.08
TNPO1-213ENST00000523768 TTC37Q6PGP7 1564 aa15.55■□□□□ 0.08
TNPO1-213ENST00000523768 ROCK2O75116 1388 aaKnown RBP15.54■□□□□ 0.08
TNPO1-213ENST00000523768 SYCP2Q9BX26 1530 aa15.54■□□□□ 0.08
TNPO1-213ENST00000523768 ZBED9Q6R2W3 1325 aa15.54■□□□□ 0.08
TNPO1-213ENST00000523768 PLEKHH2Q8IVE3 1493 aa15.53■□□□□ 0.08
TNPO1-213ENST00000523768 ARHGAP5Q13017 1502 aa15.53■□□□□ 0.08
TNPO1-213ENST00000523768 UNC13BO14795 1591 aa15.52■□□□□ 0.08
TNPO1-213ENST00000523768 FAM9BQ8IZU0 186 aa15.52■□□□□ 0.08
TNPO1-213ENST00000523768 CARD11Q9BXL7 1154 aa15.52■□□□□ 0.07
TNPO1-213ENST00000523768 ERICH6BQ5W0A0 696 aa15.51■□□□□ 0.07
TNPO1-213ENST00000523768 PLXNC1O60486 1568 aa15.51■□□□□ 0.07
TNPO1-213ENST00000523768 ERCC6L2Q5T890 1561 aa15.5■□□□□ 0.07
TNPO1-213ENST00000523768 MYO5CQ9NQX4 1742 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms