RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.54□□□□□ -0.4
PCM1-219ENST00000523540 ZFP91Q96JP5 570 aaPredicted RBP12.54□□□□□ -0.4
PCM1-219ENST00000523540 TAOK2Q9UL54 1235 aa12.54□□□□□ -0.4
PCM1-219ENST00000523540 VGFO15240 615 aaPredicted RBP12.52□□□□□ -0.41
PCM1-219ENST00000523540 GPR153Q6NV75 609 aa12.52□□□□□ -0.41
PCM1-219ENST00000523540 VARS2Q5ST30 1063 aaKnown RBP12.51□□□□□ -0.41
PCM1-219ENST00000523540 PHF8Q9UPP1 1060 aa12.51□□□□□ -0.41
PCM1-219ENST00000523540 ZNF687Q8N1G0 1237 aa12.47□□□□□ -0.41
PCM1-219ENST00000523540 RNF166Q96A37 237 aaPredicted RBP12.44□□□□□ -0.42
PCM1-219ENST00000523540 RGL2O15211 777 aa12.43□□□□□ -0.42
PCM1-219ENST00000523540 FBXO22Q8NEZ5 403 aa12.43□□□□□ -0.42
PCM1-219ENST00000523540 NLRP6P59044 892 aa12.39□□□□□ -0.43
PCM1-219ENST00000523540 ARSIQ5FYB1 569 aa12.38□□□□□ -0.43
PCM1-219ENST00000523540 MYT1LQ9UL68 1186 aa12.38□□□□□ -0.43
PCM1-219ENST00000523540 BCL11BQ9C0K0 894 aaPredicted RBP12.35□□□□□ -0.43
PCM1-219ENST00000523540 KIF3CO14782 793 aa12.34□□□□□ -0.43
PCM1-219ENST00000523540 DNAJC5Q9H3Z4 198 aa12.34□□□□□ -0.43
PCM1-219ENST00000523540 ZNF316A6NFI3 1004 aaPredicted RBP12.33□□□□□ -0.44
PCM1-219ENST00000523540 PTGER2P43116 358 aa12.33□□□□□ -0.44
PCM1-219ENST00000523540 KHSRPQ92945 711 aaKnown RBP eCLIP12.33□□□□□ -0.443e-11■■■■□ 22
PCM1-219ENST00000523540 MFRPQ9BY79 579 aa12.33□□□□□ -0.44
PCM1-219ENST00000523540 HS6ST3Q8IZP7 471 aa12.31□□□□□ -0.44
PCM1-219ENST00000523540 DCAF8L2P0C7V8 631 aa12.29□□□□□ -0.44
PCM1-219ENST00000523540 STK24Q9Y6E0 443 aa12.29□□□□□ -0.44
PCM1-219ENST00000523540 C2orf72A6NCS6 295 aa12.26□□□□□ -0.45
PCM1-219ENST00000523540 LSM11P83369 360 aaKnown RBP eCLIP12.24□□□□□ -0.45
PCM1-219ENST00000523540 ANKRD13DQ6ZTN6 518 aa12.23□□□□□ -0.45
PCM1-219ENST00000523540 STK25O00506 426 aa12.22□□□□□ -0.45
PCM1-219ENST00000523540 SLC34A2O95436 690 aa12.22□□□□□ -0.45
PCM1-219ENST00000523540 NUDT7P0C024 238 aa12.2□□□□□ -0.46
PCM1-219ENST00000523540 POTEEQ6S8J3 1075 aa12.2□□□□□ -0.46
PCM1-219ENST00000523540 PBX2P40425 430 aa12.19□□□□□ -0.46
PCM1-219ENST00000523540 LHX6Q9UPM6 363 aa12.17□□□□□ -0.46
PCM1-219ENST00000523540 PCDHGA4Q9Y5G9 962 aa12.17□□□□□ -0.46
PCM1-219ENST00000523540 CHGAP10645 457 aaKnown RBP12.16□□□□□ -0.46
PCM1-219ENST00000523540 RYDENQ9NUL5 291 aaKnown RBP12.13□□□□□ -0.47
PCM1-219ENST00000523540 BBXQ8WY36 941 aaPredicted RBP12.12□□□□□ -0.47
PCM1-219ENST00000523540 KDM4FA0A1W2PPD8 638 aa12.1□□□□□ -0.47
PCM1-219ENST00000523540 TMC2Q8TDI7 906 aa12.1□□□□□ -0.47
PCM1-219ENST00000523540 AXIN2Q9Y2T1 843 aa12.1□□□□□ -0.47
PCM1-219ENST00000523540 PPP1R37O75864 691 aa12.08□□□□□ -0.48
PCM1-219ENST00000523540 PSDA5PKW4 1024 aaPredicted RBP12.03□□□□□ -0.48
PCM1-219ENST00000523540 PTCD2Q8WV60 388 aaKnown RBP12.03□□□□□ -0.48
PCM1-219ENST00000523540 ARHGAP33O14559 1287 aa12.02□□□□□ -0.49
PCM1-219ENST00000523540 ADGRD1Q6QNK2 874 aa12.02□□□□□ -0.49
PCM1-219ENST00000523540 PLCB2Q00722 1185 aa12.01□□□□□ -0.49
PCM1-219ENST00000523540 NKX1-1Q15270 411 aaPredicted RBP12.01□□□□□ -0.49
PCM1-219ENST00000523540 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.01□□□□□ -0.49
PCM1-219ENST00000523540 FOXK1P85037 733 aa11.98□□□□□ -0.49
PCM1-219ENST00000523540 HCSTQ9UBK5 93 aa11.98□□□□□ -0.49
PCM1-219ENST00000523540 TK2O00142 265 aa11.97□□□□□ -0.49
PCM1-219ENST00000523540 HRO43593 1189 aa11.97□□□□□ -0.49
PCM1-219ENST00000523540 PLA2G2EQ9NZK7 142 aa11.96□□□□□ -0.49
PCM1-219ENST00000523540 GTPBP6O43824 516 aaPredicted RBP11.94□□□□□ -0.5
PCM1-219ENST00000523540 SLC24A1O60721 1099 aa11.94□□□□□ -0.5
PCM1-219ENST00000523540 DMRTA1Q5VZB9 504 aa11.94□□□□□ -0.5
PCM1-219ENST00000523540 PLPP6Q8IY26 295 aa11.94□□□□□ -0.5
PCM1-219ENST00000523540 GPHNQ9NQX3 736 aaPredicted RBP11.94□□□□□ -0.5
PCM1-219ENST00000523540 PSEN2P49810 448 aa11.92□□□□□ -0.5
PCM1-219ENST00000523540 PAXIP1Q6ZW49 1069 aaPredicted RBP11.92□□□□□ -0.5
PCM1-219ENST00000523540 SPRYD3Q8NCJ5 442 aa11.9□□□□□ -0.5
PCM1-219ENST00000523540 DSG2Q14126 1118 aa11.89□□□□□ -0.51
PCM1-219ENST00000523540 CFAP44Q96MT7 982 aa11.89□□□□□ -0.51
PCM1-219ENST00000523540 PPP4R3BQ5MIZ7 849 aa11.88□□□□□ -0.51
PCM1-219ENST00000523540 TBC1D12O60347 775 aa11.84□□□□□ -0.51
PCM1-219ENST00000523540 OXER1Q8TDS5 423 aa11.82□□□□□ -0.52
PCM1-219ENST00000523540 HAP1P54257 671 aaPredicted RBP11.79□□□□□ -0.52
PCM1-219ENST00000523540 KCTD12Q96CX2 325 aaKnown RBP11.79□□□□□ -0.52
PCM1-219ENST00000523540 KCNK17Q96T54 332 aa11.78□□□□□ -0.52
PCM1-219ENST00000523540 VPS9D1Q9Y2B5 631 aa11.77□□□□□ -0.53
PCM1-219ENST00000523540 SLC4A5Q9BY07 1137 aa11.76□□□□□ -0.53
PCM1-219ENST00000523540 CRISPLD2Q9H0B8 497 aa11.76□□□□□ -0.53
PCM1-219ENST00000523540 BCL2L12Q9HB09 334 aa11.74□□□□□ -0.53
PCM1-219ENST00000523540 KCNH8Q96L42 1107 aa11.73□□□□□ -0.53
PCM1-219ENST00000523540 TSHZ2Q9NRE2 1034 aa11.73□□□□□ -0.53
PCM1-219ENST00000523540 BHMG1C9JSJ3 638 aaPredicted RBP11.71□□□□□ -0.53
PCM1-219ENST00000523540 ZNF454Q8N9F8 522 aa11.71□□□□□ -0.53
PCM1-219ENST00000523540 UPF1Q92900 1129 aaKnown RBP eCLIP11.71□□□□□ -0.53
PCM1-219ENST00000523540 STAC3Q96MF2 364 aa11.71□□□□□ -0.53
PCM1-219ENST00000523540 FOSBP53539 338 aa11.7□□□□□ -0.54
PCM1-219ENST00000523540 IFFO2Q5TF58 517 aa11.69□□□□□ -0.54
PCM1-219ENST00000523540 PPP1R15BQ5SWA1 713 aa11.68□□□□□ -0.54
PCM1-219ENST00000523540 ANO8Q9HCE9 1232 aaPredicted RBP11.68□□□□□ -0.54
PCM1-219ENST00000523540 NCKAP5LQ9HCH0 1330 aa11.66□□□□□ -0.54
PCM1-219ENST00000523540 ZBED2Q9BTP6 218 aa11.66□□□□□ -0.54
PCM1-219ENST00000523540 PTPN5P54829 565 aa11.65□□□□□ -0.54
PCM1-219ENST00000523540 THSD4Q6ZMP0 1018 aa11.65□□□□□ -0.54
PCM1-219ENST00000523540 VSIG10Q8N0Z9 540 aa11.65□□□□□ -0.54
PCM1-219ENST00000523540 PTPREP23469 700 aa11.63□□□□□ -0.55
PCM1-219ENST00000523540 JPH4Q96JJ6 628 aa11.63□□□□□ -0.55
PCM1-219ENST00000523540 RGS20O76081 388 aa11.62□□□□□ -0.55
PCM1-219ENST00000523540 KDM2AQ9Y2K7 1162 aa11.62□□□□□ -0.55
PCM1-219ENST00000523540 PDE4AP27815 886 aa11.6□□□□□ -0.55
PCM1-219ENST00000523540 MFSD10Q14728 455 aa11.6□□□□□ -0.55
PCM1-219ENST00000523540 EVI5O60447 810 aa11.59□□□□□ -0.55
PCM1-219ENST00000523540 ADAM33Q9BZ11 813 aa11.59□□□□□ -0.55
PCM1-219ENST00000523540 ZDHHC16Q969W1 377 aa11.58□□□□□ -0.56
PCM1-219ENST00000523540 A0A0G2JS52 829 aa11.56□□□□□ -0.56
PCM1-219ENST00000523540 MRPL50Q8N5N7 158 aaKnown RBP11.56□□□□□ -0.56
PCM1-219ENST00000523540 WNT2BQ93097 391 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms