RNA–Protein interactions for RNA: ENST00000523215.1

ERGIC1-211, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 3,621 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-211ENST00000523215 KDM5CP41229 1560 aa15.17■□□□□ 0.02
ERGIC1-211ENST00000523215 NEURL4Q96JN8 1562 aa15.16■□□□□ 0.02
ERGIC1-211ENST00000523215 CCER2I3L3R5 266 aa15.16■□□□□ 0.02
ERGIC1-211ENST00000523215 MRC2Q9UBG0 1479 aa15.15■□□□□ 0.02
ERGIC1-211ENST00000523215 UBE2Q2Q8WVN8 375 aa15.15■□□□□ 0.02
ERGIC1-211ENST00000523215 UNC13BO14795 1591 aa15.15■□□□□ 0.02
ERGIC1-211ENST00000523215 PDS5BQ9NTI5 1447 aa15.14■□□□□ 0.01
ERGIC1-211ENST00000523215 ARHGEF12Q9NZN5 1544 aa15.14■□□□□ 0.01
ERGIC1-211ENST00000523215 RPRD2Q5VT52 1461 aaKnown RBP15.14■□□□□ 0.01
ERGIC1-211ENST00000523215 IFT140Q96RY7 1462 aa15.13■□□□□ 0.01
ERGIC1-211ENST00000523215 RNF17Q9BXT8 1623 aaKnown RBP15.12■□□□□ 0.01
ERGIC1-211ENST00000523215 KIAA0586Q9BVV6 1533 aa15.11■□□□□ 0.01
ERGIC1-211ENST00000523215 PTPRGP23470 1445 aa15.11■□□□□ 0.01
ERGIC1-211ENST00000523215 UHRF1BP1Q6BDS2 1440 aa15.11■□□□□ 0.01
ERGIC1-211ENST00000523215 NUP153P49790 1475 aaKnown RBP15.1■□□□□ 0.01
ERGIC1-211ENST00000523215 NCOA1Q15788 1441 aa15.09■□□□□ 0.01
ERGIC1-211ENST00000523215 MAGI2Q86UL8 1455 aa15.09■□□□□ 0.01
ERGIC1-211ENST00000523215 PLXNC1O60486 1568 aa15.08■□□□□ 0
ERGIC1-211ENST00000523215 BCORL1Q5H9F3 1711 aa15.08■□□□□ 0
ERGIC1-211ENST00000523215 MAGI1Q96QZ7 1491 aaPredicted RBP15.07■□□□□ 0
ERGIC1-211ENST00000523215 PREX2Q70Z35 1606 aa15.07■□□□□ 0
ERGIC1-211ENST00000523215 PZPP20742 1482 aa15.06■□□□□ 0
ERGIC1-211ENST00000523215 ABCC10Q5T3U5 1492 aa15.06■□□□□ 0
ERGIC1-211ENST00000523215 NUP160Q12769 1436 aa15.06■□□□□ 0
ERGIC1-211ENST00000523215 PODXL2Q9NZ53 605 aa15.05■□□□□ -0
ERGIC1-211ENST00000523215 SUPT16HQ9Y5B9 1047 aaKnown RBP15.04■□□□□ -0
ERGIC1-211ENST00000523215 TRPM1Q7Z4N2 1603 aa15.03■□□□□ -0
ERGIC1-211ENST00000523215 DAPK1P53355 1430 aa15.02■□□□□ -0
ERGIC1-211ENST00000523215 CDC42BPBQ9Y5S2 1711 aa15.02□□□□□ -0.01
ERGIC1-211ENST00000523215 INSRP06213 1382 aa15.01□□□□□ -0.01
ERGIC1-211ENST00000523215 GRIN2AQ12879 1464 aa15□□□□□ -0.01
ERGIC1-211ENST00000523215 IQGAP3Q86VI3 1631 aa15□□□□□ -0.01
ERGIC1-211ENST00000523215 MYO5CQ9NQX4 1742 aa15□□□□□ -0.01
ERGIC1-211ENST00000523215 DEPDC5O75140 1603 aa14.99□□□□□ -0.01
ERGIC1-211ENST00000523215 ANKRD30BQ9BXX2 1392 aa14.98□□□□□ -0.01
ERGIC1-211ENST00000523215 ABCC5O15440 1437 aa14.97□□□□□ -0.01
ERGIC1-211ENST00000523215 ATP10AO60312 1499 aa14.96□□□□□ -0.01
ERGIC1-211ENST00000523215 KIAA1210Q9ULL0 1709 aa14.95□□□□□ -0.02
ERGIC1-211ENST00000523215 CNTLNQ9NXG0 1405 aa14.95□□□□□ -0.02
ERGIC1-211ENST00000523215 CDK13Q14004 1512 aaKnown RBP14.95□□□□□ -0.02
ERGIC1-211ENST00000523215 TDRD9Q8NDG6 1382 aaKnown RBP14.94□□□□□ -0.02
ERGIC1-211ENST00000523215 RALGAPBQ86X10 1494 aa14.93□□□□□ -0.02
ERGIC1-211ENST00000523215 SYNJ2O15056 1496 aa14.93□□□□□ -0.02
ERGIC1-211ENST00000523215 P3H3Q8IVL6 736 aa14.92□□□□□ -0.02
ERGIC1-211ENST00000523215 IFT172Q9UG01 1749 aa14.92□□□□□ -0.02
ERGIC1-211ENST00000523215 ERICH6BQ5W0A0 696 aa14.91□□□□□ -0.02
ERGIC1-211ENST00000523215 CAMSAP2Q08AD1 1489 aa14.91□□□□□ -0.02
ERGIC1-211ENST00000523215 IQGAP1P46940 1657 aa14.91□□□□□ -0.02
ERGIC1-211ENST00000523215 ARAP3Q8WWN8 1544 aa14.91□□□□□ -0.02
ERGIC1-211ENST00000523215 ERCC6Q03468 1493 aa14.9□□□□□ -0.02
ERGIC1-211ENST00000523215 RNF123Q5XPI4 1314 aa14.89□□□□□ -0.03
ERGIC1-211ENST00000523215 GPATCH8Q9UKJ3 1502 aaKnown RBP14.89□□□□□ -0.03
ERGIC1-211ENST00000523215 PRDM15P57071 1507 aaPredicted RBP14.88□□□□□ -0.03
ERGIC1-211ENST00000523215 TROQ12816 1431 aaPredicted RBP14.87□□□□□ -0.03
ERGIC1-211ENST00000523215 CEP152O94986 1710 aa14.87□□□□□ -0.03
ERGIC1-211ENST00000523215 ITGAEP38570 1179 aa14.87□□□□□ -0.03
ERGIC1-211ENST00000523215 TULP1O00294 542 aaPredicted RBP14.86□□□□□ -0.03
ERGIC1-211ENST00000523215 SAMD9LQ8IVG5 1584 aa14.86□□□□□ -0.03
ERGIC1-211ENST00000523215 ARID4BQ4LE39 1312 aaPredicted RBP14.86□□□□□ -0.03
ERGIC1-211ENST00000523215 VWDEQ8N2E2 1590 aa14.86□□□□□ -0.03
ERGIC1-211ENST00000523215 MYO3AQ8NEV4 1616 aa14.85□□□□□ -0.03
ERGIC1-211ENST00000523215 EIF2AK4Q9P2K8 1649 aaKnown RBP14.84□□□□□ -0.03
ERGIC1-211ENST00000523215 TSHZ2Q9NRE2 1034 aa14.84□□□□□ -0.03
ERGIC1-211ENST00000523215 SPHKAPQ2M3C7 1700 aa14.84□□□□□ -0.03
ERGIC1-211ENST00000523215 DHX29Q7Z478 1369 aaKnown RBP14.84□□□□□ -0.03
ERGIC1-211ENST00000523215 AMER1Q5JTC6 1135 aaPredicted RBP14.84□□□□□ -0.03
ERGIC1-211ENST00000523215 CLASP1Q7Z460 1538 aa14.84□□□□□ -0.03
ERGIC1-211ENST00000523215 YTHDC1Q96MU7 727 aaKnown RBP14.84□□□□□ -0.03
ERGIC1-211ENST00000523215 AEBP2Q6ZN18 517 aaPredicted RBP14.83□□□□□ -0.04
ERGIC1-211ENST00000523215 MYOM1P52179 1685 aa14.81□□□□□ -0.04
ERGIC1-211ENST00000523215 HOMEZQ8IX15 550 aa14.81□□□□□ -0.04
ERGIC1-211ENST00000523215 VIRMAQ69YN4 1812 aaKnown RBP14.8□□□□□ -0.04
ERGIC1-211ENST00000523215 SIN3AQ96ST3 1273 aa14.79□□□□□ -0.04
ERGIC1-211ENST00000523215 ZC3H13Q5T200 1668 aaKnown RBP14.79□□□□□ -0.04
ERGIC1-211ENST00000523215 ZNF608Q9ULD9 1512 aaPredicted RBP14.79□□□□□ -0.04
ERGIC1-211ENST00000523215 FAM50AQ14320 339 aaKnown RBP14.77□□□□□ -0.04
ERGIC1-211ENST00000523215 MTUS2Q5JR59 1369 aa14.77□□□□□ -0.05
ERGIC1-211ENST00000523215 GPRASP1Q5JY77 1395 aa14.77□□□□□ -0.05
ERGIC1-211ENST00000523215 KTN1Q86UP2 1357 aaKnown RBP14.76□□□□□ -0.05
ERGIC1-211ENST00000523215 KIAA1107Q9UPP5 1409 aa14.76□□□□□ -0.05
ERGIC1-211ENST00000523215 PPRC1Q5VV67 1664 aaKnown RBP14.75□□□□□ -0.05
ERGIC1-211ENST00000523215 LRPPRCP42704 1394 aaKnown RBP14.75□□□□□ -0.05
ERGIC1-211ENST00000523215 CCDC7Q96M83 1385 aa14.74□□□□□ -0.05
ERGIC1-211ENST00000523215 WDR7Q9Y4E6 1490 aa14.74□□□□□ -0.05
ERGIC1-211ENST00000523215 MADDQ8WXG6 1647 aa14.73□□□□□ -0.05
ERGIC1-211ENST00000523215 WASHC2AQ641Q2 1341 aa14.73□□□□□ -0.05
ERGIC1-211ENST00000523215 DUOX2Q9NRD8 1548 aa14.73□□□□□ -0.05
ERGIC1-211ENST00000523215 UHRF1BP1LA0JNW5 1464 aa14.72□□□□□ -0.05
ERGIC1-211ENST00000523215 ANO8Q9HCE9 1232 aaPredicted RBP14.72□□□□□ -0.05
ERGIC1-211ENST00000523215 CHD1O14646 1710 aa14.72□□□□□ -0.05
ERGIC1-211ENST00000523215 SMG6Q86US8 1419 aaKnown RBP14.72□□□□□ -0.05
ERGIC1-211ENST00000523215 USP32Q8NFA0 1604 aa14.71□□□□□ -0.05
ERGIC1-211ENST00000523215 KCNH8Q96L42 1107 aa14.71□□□□□ -0.05
ERGIC1-211ENST00000523215 ABCA9Q8IUA7 1624 aa14.71□□□□□ -0.06
ERGIC1-211ENST00000523215 PDIA4P13667 645 aaKnown RBP14.7□□□□□ -0.06
ERGIC1-211ENST00000523215 INO80Q9ULG1 1556 aaPredicted RBP14.7□□□□□ -0.06
ERGIC1-211ENST00000523215 FANCIQ9NVI1 1328 aa14.7□□□□□ -0.06
ERGIC1-211ENST00000523215 SYNMO15061 1565 aa14.68□□□□□ -0.06
ERGIC1-211ENST00000523215 TTC37Q6PGP7 1564 aa14.68□□□□□ -0.06
ERGIC1-211ENST00000523215 ABCC2Q92887 1545 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms