RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 UBTFP17480 764 aaKnown RBP15.57■□□□□ 0.08
SDC2-207ENST00000522911 YEATS2Q9ULM3 1422 aa15.57■□□□□ 0.08
SDC2-207ENST00000522911 EFCAB2Q5VUJ9 269 aa15.56■□□□□ 0.08
SDC2-207ENST00000522911 TROQ12816 1431 aaPredicted RBP15.56■□□□□ 0.08
SDC2-207ENST00000522911 ATP10AO60312 1499 aa15.53■□□□□ 0.08
SDC2-207ENST00000522911 ZNF518AQ6AHZ1 1483 aa15.53■□□□□ 0.08
SDC2-207ENST00000522911 MYO5CQ9NQX4 1742 aa15.53■□□□□ 0.08
SDC2-207ENST00000522911 KIF14Q15058 1648 aa15.53■□□□□ 0.08
SDC2-207ENST00000522911 CLIP1P30622 1438 aa15.52■□□□□ 0.08
SDC2-207ENST00000522911 RIMS1Q86UR5 1692 aaKnown RBP15.52■□□□□ 0.08
SDC2-207ENST00000522911 KDM5CP41229 1560 aa15.52■□□□□ 0.07
SDC2-207ENST00000522911 C9orf84Q5VXU9 1444 aa15.51■□□□□ 0.07
SDC2-207ENST00000522911 SIGLEC1Q9BZZ2 1709 aa15.51■□□□□ 0.07
SDC2-207ENST00000522911 FBXO41Q8TF61 875 aa15.51■□□□□ 0.07
SDC2-207ENST00000522911 ARHGEF12Q9NZN5 1544 aa15.51■□□□□ 0.07
SDC2-207ENST00000522911 CCDC18Q5T9S5 1454 aa15.49■□□□□ 0.07
SDC2-207ENST00000522911 CASKIN1Q8WXD9 1431 aa15.49■□□□□ 0.07
SDC2-207ENST00000522911 REREQ9P2R6 1566 aa15.49■□□□□ 0.07
SDC2-207ENST00000522911 MLH3Q9UHC1 1453 aa15.46■□□□□ 0.07
SDC2-207ENST00000522911 ARHGAP5Q13017 1502 aa15.45■□□□□ 0.06
SDC2-207ENST00000522911 ATP1B4Q9UN42 357 aaPredicted RBP15.45■□□□□ 0.06
SDC2-207ENST00000522911 FER1L4A9Z1Z3 1794 aa15.44■□□□□ 0.06
SDC2-207ENST00000522911 LRRIQ1Q96JM4 1722 aa15.44■□□□□ 0.06
SDC2-207ENST00000522911 FYCO1Q9BQS8 1478 aa15.43■□□□□ 0.06
SDC2-207ENST00000522911 PREX2Q70Z35 1606 aa15.43■□□□□ 0.06
SDC2-207ENST00000522911 AGLP35573 1532 aa15.43■□□□□ 0.06
SDC2-207ENST00000522911 AFAP1Q8N556 730 aa15.42■□□□□ 0.06
SDC2-207ENST00000522911 CDC42BPBQ9Y5S2 1711 aa15.42■□□□□ 0.06
SDC2-207ENST00000522911 DIP2CQ9Y2E4 1556 aa15.41■□□□□ 0.06
SDC2-207ENST00000522911 ABCC1P33527 1531 aa15.41■□□□□ 0.06
SDC2-207ENST00000522911 MLECQ14165 292 aa15.38■□□□□ 0.05
SDC2-207ENST00000522911 PREX1Q8TCU6 1659 aa15.38■□□□□ 0.05
SDC2-207ENST00000522911 TRAPPC8Q9Y2L5 1435 aa15.37■□□□□ 0.05
SDC2-207ENST00000522911 HSPA2P54652 639 aa15.37■□□□□ 0.05
SDC2-207ENST00000522911 EHMT2Q96KQ7 1210 aa15.37■□□□□ 0.05
SDC2-207ENST00000522911 ABCA6Q8N139 1617 aa15.36■□□□□ 0.05
SDC2-207ENST00000522911 ITSN2Q9NZM3 1697 aa15.35■□□□□ 0.05
SDC2-207ENST00000522911 SETD1BQ9UPS6 1966 aaKnown RBP15.35■□□□□ 0.05
SDC2-207ENST00000522911 CDC42BPAQ5VT25 1732 aa15.34■□□□□ 0.05
SDC2-207ENST00000522911 CNTLNQ9NXG0 1405 aa15.34■□□□□ 0.05
SDC2-207ENST00000522911 KIAA1107Q9UPP5 1409 aa15.34■□□□□ 0.05
SDC2-207ENST00000522911 UHRF1BP1Q6BDS2 1440 aa15.33■□□□□ 0.04
SDC2-207ENST00000522911 GPATCH8Q9UKJ3 1502 aaKnown RBP15.33■□□□□ 0.04
SDC2-207ENST00000522911 KIDINS220Q9ULH0 1771 aa15.32■□□□□ 0.04
SDC2-207ENST00000522911 DMRT2Q9Y5R5 561 aa15.32■□□□□ 0.04
SDC2-207ENST00000522911 PLEKHH2Q8IVE3 1493 aa15.31■□□□□ 0.04
SDC2-207ENST00000522911 SAMD9LQ8IVG5 1584 aa15.31■□□□□ 0.04
SDC2-207ENST00000522911 CEBPAP49715 358 aaPredicted RBP15.3■□□□□ 0.04
SDC2-207ENST00000522911 CERKQ8TCT0 537 aa15.29■□□□□ 0.04
SDC2-207ENST00000522911 C3P01024 1663 aa15.28■□□□□ 0.04
SDC2-207ENST00000522911 PTPRTO14522 1441 aa15.27■□□□□ 0.04
SDC2-207ENST00000522911 NPATQ14207 1427 aa15.27■□□□□ 0.04
SDC2-207ENST00000522911 PLPPR3Q6T4P5 718 aa15.27■□□□□ 0.04
SDC2-207ENST00000522911 STRCQ7RTU9 1775 aa15.26■□□□□ 0.03
SDC2-207ENST00000522911 MYT1LQ9UL68 1186 aa15.26■□□□□ 0.03
SDC2-207ENST00000522911 PLXNC1O60486 1568 aa15.26■□□□□ 0.03
SDC2-207ENST00000522911 SYCP2Q9BX26 1530 aa15.26■□□□□ 0.03
SDC2-207ENST00000522911 MROH2AA6NES4 1674 aa15.25■□□□□ 0.03
SDC2-207ENST00000522911 SPAG9O60271 1321 aaKnown RBP15.25■□□□□ 0.03
SDC2-207ENST00000522911 INO80Q9ULG1 1556 aaPredicted RBP15.24■□□□□ 0.03
SDC2-207ENST00000522911 ESF1Q9H501 851 aaKnown RBP15.24■□□□□ 0.03
SDC2-207ENST00000522911 PPP6R1Q9UPN7 881 aa15.24■□□□□ 0.03
SDC2-207ENST00000522911 CCNB3Q8WWL7 1395 aa15.24■□□□□ 0.03
SDC2-207ENST00000522911 ATP7AQ04656 1500 aa15.23■□□□□ 0.03
SDC2-207ENST00000522911 CFDP1Q9UEE9 299 aaPredicted RBP15.23■□□□□ 0.03
SDC2-207ENST00000522911 MTUS2Q5JR59 1369 aa15.23■□□□□ 0.03
SDC2-207ENST00000522911 CEP162Q5TB80 1403 aa15.21■□□□□ 0.03
SDC2-207ENST00000522911 HNRNPMP52272 730 aaKnown RBP eCLIP15.21■□□□□ 0.035e-7■■■□□ 14.9
SDC2-207ENST00000522911 A2MP01023 1474 aa15.2■□□□□ 0.02
SDC2-207ENST00000522911 RTEL1-TNFRSF6BF6WH68 1400 aa15.2■□□□□ 0.02
SDC2-207ENST00000522911 NCOA1Q15788 1441 aa15.2■□□□□ 0.02
SDC2-207ENST00000522911 EHBP1L1Q8N3D4 1523 aa15.2■□□□□ 0.02
SDC2-207ENST00000522911 ZMYM3Q14202 1370 aa15.2■□□□□ 0.02
SDC2-207ENST00000522911 MBD5Q9P267 1494 aa15.2■□□□□ 0.02
SDC2-207ENST00000522911 ZNF777Q9ULD5 760 aaPredicted RBP15.19■□□□□ 0.02
SDC2-207ENST00000522911 IQSEC2Q5JU85 1478 aa15.19■□□□□ 0.02
SDC2-207ENST00000522911 TIAM1Q13009 1591 aa15.18■□□□□ 0.02
SDC2-207ENST00000522911 FAM135AQ9P2D6 1515 aa15.16■□□□□ 0.02
SDC2-207ENST00000522911 ADGBQ8N7X0 1667 aa15.16■□□□□ 0.02
SDC2-207ENST00000522911 PLA2R1Q13018 1463 aa15.15■□□□□ 0.02
SDC2-207ENST00000522911 LTBP4Q8N2S1 1624 aa15.15■□□□□ 0.02
SDC2-207ENST00000522911 PTPRKQ15262 1439 aa15.15■□□□□ 0.02
SDC2-207ENST00000522911 ZNF142P52746 1687 aaPredicted RBP15.14■□□□□ 0.01
SDC2-207ENST00000522911 RSPH4AQ5TD94 716 aa15.14■□□□□ 0.01
SDC2-207ENST00000522911 DHX29Q7Z478 1369 aaKnown RBP15.13■□□□□ 0.01
SDC2-207ENST00000522911 SUPT6HQ7KZ85 1726 aaKnown RBP15.13■□□□□ 0.01
SDC2-207ENST00000522911 CAMSAP1Q5T5Y3 1602 aa15.12■□□□□ 0.01
SDC2-207ENST00000522911 PKD2Q13563 968 aa15.11■□□□□ 0.01
SDC2-207ENST00000522911 TCOF1Q13428 1488 aaKnown RBP15.11■□□□□ 0.01
SDC2-207ENST00000522911 ZNF644Q9H582 1327 aaPredicted RBP15.11■□□□□ 0.01
SDC2-207ENST00000522911 CLTCQ00610 1675 aaKnown RBP15.1■□□□□ 0.01
SDC2-207ENST00000522911 CCDC141Q6ZP82 1450 aa15.09■□□□□ 0.01
SDC2-207ENST00000522911 CEP170BQ9Y4F5 1589 aaPredicted RBP15.09■□□□□ 0.01
SDC2-207ENST00000522911 MYO3AQ8NEV4 1616 aa15.09■□□□□ 0.01
SDC2-207ENST00000522911 NCOA2Q15596 1464 aa15.08■□□□□ 0.01
SDC2-207ENST00000522911 ARHGEF5Q12774 1597 aa15.07■□□□□ 0
SDC2-207ENST00000522911 GGT6Q6P531 493 aa15.07■□□□□ 0
SDC2-207ENST00000522911 A2ML1A8K2U0 1454 aa15.07■□□□□ 0
SDC2-207ENST00000522911 CAMSAP2Q08AD1 1489 aa15.06■□□□□ 0
SDC2-207ENST00000522911 MAP3K1Q13233 1512 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms