RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 ARHGAP5Q13017 1502 aa26.06■■□□□ 1.76
PABPC1-221ENST00000522720 SCAPERQ9BY12 1400 aa26.05■■□□□ 1.76
PABPC1-221ENST00000522720 CDC42BPBQ9Y5S2 1711 aa26.05■■□□□ 1.76
PABPC1-221ENST00000522720 PREX2Q70Z35 1606 aa26.03■■□□□ 1.76
PABPC1-221ENST00000522720 CDC42BPAQ5VT25 1732 aa26.01■■□□□ 1.75
PABPC1-221ENST00000522720 POGZQ7Z3K3 1410 aa25.99■■□□□ 1.75
PABPC1-221ENST00000522720 ZMYM4Q5VZL5 1548 aa25.98■■□□□ 1.75
PABPC1-221ENST00000522720 EHBP1L1Q8N3D4 1523 aa25.98■■□□□ 1.75
PABPC1-221ENST00000522720 GPATCH8Q9UKJ3 1502 aaKnown RBP25.98■■□□□ 1.75
PABPC1-221ENST00000522720 MAGI2Q86UL8 1455 aa25.95■■□□□ 1.74
PABPC1-221ENST00000522720 TIAM1Q13009 1591 aa25.95■■□□□ 1.74
PABPC1-221ENST00000522720 CCNB3Q8WWL7 1395 aa25.94■■□□□ 1.74
PABPC1-221ENST00000522720 ARHGEF40Q8TER5 1519 aa25.92■■□□□ 1.74
PABPC1-221ENST00000522720 AFAP1Q8N556 730 aa25.91■■□□□ 1.74
PABPC1-221ENST00000522720 ZNF518AQ6AHZ1 1483 aa25.91■■□□□ 1.74
PABPC1-221ENST00000522720 CFDP1Q9UEE9 299 aaPredicted RBP25.9■■□□□ 1.74
PABPC1-221ENST00000522720 ABCC1P33527 1531 aa25.89■■□□□ 1.74
PABPC1-221ENST00000522720 MAP3K1Q13233 1512 aa25.89■■□□□ 1.74
PABPC1-221ENST00000522720 ZNF777Q9ULD5 760 aaPredicted RBP25.89■■□□□ 1.74
PABPC1-221ENST00000522720 YEATS2Q9ULM3 1422 aa25.88■■□□□ 1.73
PABPC1-221ENST00000522720 ZFYVE16Q7Z3T8 1539 aa25.88■■□□□ 1.73
PABPC1-221ENST00000522720 ARHGEF12Q9NZN5 1544 aa25.88■■□□□ 1.73
PABPC1-221ENST00000522720 LRRC9Q6ZRR7 1453 aa25.86■■□□□ 1.73
PABPC1-221ENST00000522720 KDM5CP41229 1560 aa25.86■■□□□ 1.73
PABPC1-221ENST00000522720 TRAPPC8Q9Y2L5 1435 aa25.85■■□□□ 1.73
PABPC1-221ENST00000522720 SAMD9LQ8IVG5 1584 aa25.85■■□□□ 1.73
PABPC1-221ENST00000522720 SUPT6HQ7KZ85 1726 aaKnown RBP25.85■■□□□ 1.73
PABPC1-221ENST00000522720 ITSN2Q9NZM3 1697 aa25.84■■□□□ 1.73
PABPC1-221ENST00000522720 NCOA2Q15596 1464 aa25.84■■□□□ 1.73
PABPC1-221ENST00000522720 ARID4BQ4LE39 1312 aaPredicted RBP25.83■■□□□ 1.73
PABPC1-221ENST00000522720 PLEKHH2Q8IVE3 1493 aa25.81■■□□□ 1.72
PABPC1-221ENST00000522720 KANK4Q5T7N3 995 aaPredicted RBP25.81■■□□□ 1.72
PABPC1-221ENST00000522720 KIAA1107Q9UPP5 1409 aa25.8■■□□□ 1.72
PABPC1-221ENST00000522720 ATP10AO60312 1499 aa25.79■■□□□ 1.72
PABPC1-221ENST00000522720 MLH3Q9UHC1 1453 aa25.79■■□□□ 1.72
PABPC1-221ENST00000522720 HNRNPMP52272 730 aaKnown RBP eCLIP25.79■■□□□ 1.72
PABPC1-221ENST00000522720 APLP2Q06481 763 aa25.79■■□□□ 1.72
PABPC1-221ENST00000522720 HECW2Q9P2P5 1572 aa25.78■■□□□ 1.72
PABPC1-221ENST00000522720 MYT1LQ9UL68 1186 aa25.78■■□□□ 1.72
PABPC1-221ENST00000522720 SYCP2Q9BX26 1530 aa25.78■■□□□ 1.72
PABPC1-221ENST00000522720 BCORL1Q5H9F3 1711 aa25.77■■□□□ 1.72
PABPC1-221ENST00000522720 ZNF644Q9H582 1327 aaPredicted RBP25.76■■□□□ 1.71
PABPC1-221ENST00000522720 ADAMTSL3P82987 1691 aa25.76■■□□□ 1.71
PABPC1-221ENST00000522720 SIGLEC1Q9BZZ2 1709 aa25.74■■□□□ 1.71
PABPC1-221ENST00000522720 C9orf84Q5VXU9 1444 aa25.74■■□□□ 1.71
PABPC1-221ENST00000522720 DIP2CQ9Y2E4 1556 aa25.7■■□□□ 1.71
PABPC1-221ENST00000522720 SPAG9O60271 1321 aaKnown RBP25.7■■□□□ 1.71
PABPC1-221ENST00000522720 KIDINS220Q9ULH0 1771 aa25.7■■□□□ 1.7
PABPC1-221ENST00000522720 MBD5Q9P267 1494 aa25.69■■□□□ 1.7
PABPC1-221ENST00000522720 ABCA6Q8N139 1617 aa25.68■■□□□ 1.7
PABPC1-221ENST00000522720 REREQ9P2R6 1566 aa25.67■■□□□ 1.7
PABPC1-221ENST00000522720 MADDQ8WXG6 1647 aa25.65■■□□□ 1.7
PABPC1-221ENST00000522720 CAMSAP2Q08AD1 1489 aa25.65■■□□□ 1.7
PABPC1-221ENST00000522720 MLECQ14165 292 aa25.64■■□□□ 1.7
PABPC1-221ENST00000522720 PTPRMP28827 1452 aa25.64■■□□□ 1.69
PABPC1-221ENST00000522720 RSPH4AQ5TD94 716 aa25.63■■□□□ 1.69
PABPC1-221ENST00000522720 ATP7AQ04656 1500 aa25.62■■□□□ 1.69
PABPC1-221ENST00000522720 MYOM3Q5VTT5 1437 aa25.62■■□□□ 1.69
PABPC1-221ENST00000522720 MIA2Q96PC5 1412 aa25.61■■□□□ 1.69
PABPC1-221ENST00000522720 INO80Q9ULG1 1556 aaPredicted RBP25.61■■□□□ 1.69
PABPC1-221ENST00000522720 AGLP35573 1532 aa25.59■■□□□ 1.69
PABPC1-221ENST00000522720 RIMS1Q86UR5 1692 aaKnown RBP25.58■■□□□ 1.68
PABPC1-221ENST00000522720 CCDC141Q6ZP82 1450 aa25.57■■□□□ 1.68
PABPC1-221ENST00000522720 RTEL1-TNFRSF6BF6WH68 1400 aa25.56■■□□□ 1.68
PABPC1-221ENST00000522720 ARHGEF5Q12774 1597 aa25.55■■□□□ 1.68
PABPC1-221ENST00000522720 FER1L4A9Z1Z3 1794 aa25.54■■□□□ 1.68
PABPC1-221ENST00000522720 A2MP01023 1474 aa25.52■■□□□ 1.68
PABPC1-221ENST00000522720 TSPY4P0CV99 314 aa25.51■■□□□ 1.67
PABPC1-221ENST00000522720 TSPY10P0CW01 314 aa25.51■■□□□ 1.67
PABPC1-221ENST00000522720 ADGBQ8N7X0 1667 aa25.49■■□□□ 1.67
PABPC1-221ENST00000522720 PLXNC1O60486 1568 aa25.48■■□□□ 1.67
PABPC1-221ENST00000522720 FGD6Q6ZV73 1430 aa25.46■■□□□ 1.67
PABPC1-221ENST00000522720 PTPN23Q9H3S7 1636 aa25.45■■□□□ 1.66
PABPC1-221ENST00000522720 DHX29Q7Z478 1369 aaKnown RBP25.44■■□□□ 1.66
PABPC1-221ENST00000522720 PLPPR3Q6T4P5 718 aa25.43■■□□□ 1.66
PABPC1-221ENST00000522720 ESF1Q9H501 851 aaKnown RBP25.42■■□□□ 1.66
PABPC1-221ENST00000522720 MAST1Q9Y2H9 1570 aa25.41■■□□□ 1.66
PABPC1-221ENST00000522720 TCOF1Q13428 1488 aaKnown RBP25.4■■□□□ 1.66
PABPC1-221ENST00000522720 CEBPAP49715 358 aaPredicted RBP25.38■■□□□ 1.65
PABPC1-221ENST00000522720 CNTLNQ9NXG0 1405 aa25.37■■□□□ 1.65
PABPC1-221ENST00000522720 GGT6Q6P531 493 aa25.37■■□□□ 1.65
PABPC1-221ENST00000522720 ABCC5O15440 1437 aa25.37■■□□□ 1.65
PABPC1-221ENST00000522720 PPP6R1Q9UPN7 881 aa25.35■■□□□ 1.65
PABPC1-221ENST00000522720 KIF3BO15066 747 aa25.34■■□□□ 1.65
PABPC1-221ENST00000522720 SETD1BQ9UPS6 1966 aaKnown RBP25.33■■□□□ 1.64
PABPC1-221ENST00000522720 DAPK1P53355 1430 aa25.32■■□□□ 1.64
PABPC1-221ENST00000522720 SHANK2Q9UPX8 1470 aa25.32■■□□□ 1.64
PABPC1-221ENST00000522720 C3P01024 1663 aa25.32■■□□□ 1.64
PABPC1-221ENST00000522720 DNMT1P26358 1616 aaKnown RBP25.31■■□□□ 1.64
PABPC1-221ENST00000522720 LMTK3Q96Q04 1460 aa25.31■■□□□ 1.64
PABPC1-221ENST00000522720 CROCC2H7BZ55 1655 aa25.31■■□□□ 1.64
PABPC1-221ENST00000522720 MROH2AA6NES4 1674 aa25.29■■□□□ 1.64
PABPC1-221ENST00000522720 PPARGC1BQ86YN6 1023 aaKnown RBP25.29■■□□□ 1.64
PABPC1-221ENST00000522720 ZMYM3Q14202 1370 aa25.29■■□□□ 1.64
PABPC1-221ENST00000522720 FAM50AQ14320 339 aaKnown RBP25.28■■□□□ 1.64
PABPC1-221ENST00000522720 CLTCQ00610 1675 aaKnown RBP25.27■■□□□ 1.64
PABPC1-221ENST00000522720 DUOX2Q9NRD8 1548 aa25.24■■□□□ 1.63
PABPC1-221ENST00000522720 KIF15Q9NS87 1388 aa25.24■■□□□ 1.63
PABPC1-221ENST00000522720 RRP7BPQ9NSQ0 103 aa25.23■■□□□ 1.63
PABPC1-221ENST00000522720 PREX1Q8TCU6 1659 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms