RNA–Protein interactions for RNA: ENST00000522698.1

EXTL3-211, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 4

Gene EXTL3, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-211ENST00000522698 ADAMTSL3P82987 1691 aa21.82■■□□□ 1.08
EXTL3-211ENST00000522698 NEO1Q92859 1461 aa21.81■■□□□ 1.08
EXTL3-211ENST00000522698 CDC42BPAQ5VT25 1732 aa21.8■■□□□ 1.08
EXTL3-211ENST00000522698 FRMPD1Q5SYB0 1578 aa21.8■■□□□ 1.08
EXTL3-211ENST00000522698 MYO5CQ9NQX4 1742 aa21.79■■□□□ 1.08
EXTL3-211ENST00000522698 PPARGC1BQ86YN6 1023 aaKnown RBP21.78■■□□□ 1.08
EXTL3-211ENST00000522698 PTPRMP28827 1452 aa21.77■■□□□ 1.08
EXTL3-211ENST00000522698 ITSN2Q9NZM3 1697 aa21.77■■□□□ 1.08
EXTL3-211ENST00000522698 PREX2Q70Z35 1606 aa21.76■■□□□ 1.07
EXTL3-211ENST00000522698 CDC42BPBQ9Y5S2 1711 aa21.75■■□□□ 1.07
EXTL3-211ENST00000522698 FBXO41Q8TF61 875 aa21.74■■□□□ 1.07
EXTL3-211ENST00000522698 BCORL1Q5H9F3 1711 aa21.74■■□□□ 1.07
EXTL3-211ENST00000522698 GPATCH8Q9UKJ3 1502 aaKnown RBP21.73■■□□□ 1.07
EXTL3-211ENST00000522698 CCNB3Q8WWL7 1395 aa21.7■■□□□ 1.06
EXTL3-211ENST00000522698 MYOM3Q5VTT5 1437 aa21.7■■□□□ 1.06
EXTL3-211ENST00000522698 ARHGEF40Q8TER5 1519 aa21.7■■□□□ 1.06
EXTL3-211ENST00000522698 MADDQ8WXG6 1647 aa21.69■■□□□ 1.06
EXTL3-211ENST00000522698 ARID4BQ4LE39 1312 aaPredicted RBP21.68■■□□□ 1.06
EXTL3-211ENST00000522698 DENND4BO75064 1496 aaPredicted RBP21.67■■□□□ 1.06
EXTL3-211ENST00000522698 PLCH2O75038 1416 aa21.67■■□□□ 1.06
EXTL3-211ENST00000522698 FANCAO15360 1455 aa21.66■■□□□ 1.06
EXTL3-211ENST00000522698 AKNAQ7Z591 1439 aa21.65■■□□□ 1.06
EXTL3-211ENST00000522698 RICTORQ6R327 1708 aa21.65■■□□□ 1.06
EXTL3-211ENST00000522698 MIA2Q96PC5 1412 aa21.64■■□□□ 1.06
EXTL3-211ENST00000522698 CFAP74Q9C0B2 1584 aa21.64■■□□□ 1.05
EXTL3-211ENST00000522698 FGD6Q6ZV73 1430 aa21.63■■□□□ 1.05
EXTL3-211ENST00000522698 ARHGAP5Q13017 1502 aa21.63■■□□□ 1.05
EXTL3-211ENST00000522698 PTPN23Q9H3S7 1636 aa21.62■■□□□ 1.05
EXTL3-211ENST00000522698 RIMS1Q86UR5 1692 aaKnown RBP21.61■■□□□ 1.05
EXTL3-211ENST00000522698 LMTK3Q96Q04 1460 aa21.61■■□□□ 1.05
EXTL3-211ENST00000522698 RRBP1Q9P2E9 1410 aaKnown RBP21.61■■□□□ 1.05
EXTL3-211ENST00000522698 SAMD9LQ8IVG5 1584 aa21.61■■□□□ 1.05
EXTL3-211ENST00000522698 TCOF1Q13428 1488 aaKnown RBP21.59■■□□□ 1.05
EXTL3-211ENST00000522698 ZMYM4Q5VZL5 1548 aa21.58■■□□□ 1.04
EXTL3-211ENST00000522698 YEATS2Q9ULM3 1422 aa21.57■■□□□ 1.04
EXTL3-211ENST00000522698 ZFYVE16Q7Z3T8 1539 aa21.57■■□□□ 1.04
EXTL3-211ENST00000522698 CFDP1Q9UEE9 299 aaPredicted RBP21.57■■□□□ 1.04
EXTL3-211ENST00000522698 CAMSAP2Q08AD1 1489 aa21.56■■□□□ 1.04
EXTL3-211ENST00000522698 SIGLEC1Q9BZZ2 1709 aa21.55■■□□□ 1.04
EXTL3-211ENST00000522698 ABCC1P33527 1531 aa21.55■■□□□ 1.04
EXTL3-211ENST00000522698 POGZQ7Z3K3 1410 aa21.55■■□□□ 1.04
EXTL3-211ENST00000522698 EFCAB2Q5VUJ9 269 aa21.53■■□□□ 1.04
EXTL3-211ENST00000522698 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.52■■□□□ 1.04
EXTL3-211ENST00000522698 PLPPR3Q6T4P5 718 aa21.52■■□□□ 1.04
EXTL3-211ENST00000522698 ZNF644Q9H582 1327 aaPredicted RBP21.51■■□□□ 1.03
EXTL3-211ENST00000522698 PLEKHH2Q8IVE3 1493 aa21.51■■□□□ 1.03
EXTL3-211ENST00000522698 SCAPERQ9BY12 1400 aa21.5■■□□□ 1.03
EXTL3-211ENST00000522698 SYCP2Q9BX26 1530 aa21.5■■□□□ 1.03
EXTL3-211ENST00000522698 KIAA1107Q9UPP5 1409 aa21.49■■□□□ 1.03
EXTL3-211ENST00000522698 MAGI2Q86UL8 1455 aa21.49■■□□□ 1.03
EXTL3-211ENST00000522698 ARHGEF5Q12774 1597 aa21.48■■□□□ 1.03
EXTL3-211ENST00000522698 ARHGEF12Q9NZN5 1544 aa21.48■■□□□ 1.03
EXTL3-211ENST00000522698 DNMT1P26358 1616 aaKnown RBP21.47■■□□□ 1.03
EXTL3-211ENST00000522698 MBD5Q9P267 1494 aa21.47■■□□□ 1.03
EXTL3-211ENST00000522698 MLECQ14165 292 aa21.47■■□□□ 1.03
EXTL3-211ENST00000522698 ZNF777Q9ULD5 760 aaPredicted RBP21.47■■□□□ 1.03
EXTL3-211ENST00000522698 CROCC2H7BZ55 1655 aa21.47■■□□□ 1.03
EXTL3-211ENST00000522698 FER1L4A9Z1Z3 1794 aa21.46■■□□□ 1.03
EXTL3-211ENST00000522698 HSPA2P54652 639 aa21.44■■□□□ 1.02
EXTL3-211ENST00000522698 FAM50AQ14320 339 aaKnown RBP21.42■■□□□ 1.02
EXTL3-211ENST00000522698 CCDC141Q6ZP82 1450 aa21.4■■□□□ 1.02
EXTL3-211ENST00000522698 C9orf84Q5VXU9 1444 aa21.4■■□□□ 1.02
EXTL3-211ENST00000522698 DAPK1P53355 1430 aa21.39■■□□□ 1.02
EXTL3-211ENST00000522698 TRAPPC8Q9Y2L5 1435 aa21.39■■□□□ 1.02
EXTL3-211ENST00000522698 KDM5CP41229 1560 aa21.39■■□□□ 1.01
EXTL3-211ENST00000522698 ATP10AO60312 1499 aa21.39■■□□□ 1.01
EXTL3-211ENST00000522698 ABCC5O15440 1437 aa21.38■■□□□ 1.01
EXTL3-211ENST00000522698 HNRNPMP52272 730 aaKnown RBP eCLIP21.38■■□□□ 1.01
EXTL3-211ENST00000522698 SHANK2Q9UPX8 1470 aa21.38■■□□□ 1.01
EXTL3-211ENST00000522698 MAST1Q9Y2H9 1570 aa21.37■■□□□ 1.01
EXTL3-211ENST00000522698 TRIM26Q12899 539 aaPredicted RBP21.37■■□□□ 1.01
EXTL3-211ENST00000522698 ZNF518AQ6AHZ1 1483 aa21.37■■□□□ 1.01
EXTL3-211ENST00000522698 RSPH4AQ5TD94 716 aa21.36■■□□□ 1.01
EXTL3-211ENST00000522698 ADGBQ8N7X0 1667 aa21.35■■□□□ 1.01
EXTL3-211ENST00000522698 PREX1Q8TCU6 1659 aa21.35■■□□□ 1.01
EXTL3-211ENST00000522698 PTPRKQ15262 1439 aa21.35■■□□□ 1.01
EXTL3-211ENST00000522698 INO80Q9ULG1 1556 aaPredicted RBP21.34■■□□□ 1.01
EXTL3-211ENST00000522698 CERKQ8TCT0 537 aa21.33■■□□□ 1.01
EXTL3-211ENST00000522698 AFAP1Q8N556 730 aa21.32■■□□□ 1
EXTL3-211ENST00000522698 KIDINS220Q9ULH0 1771 aa21.31■■□□□ 1
EXTL3-211ENST00000522698 ADGRL2O95490 1459 aa21.3■■□□□ 1
EXTL3-211ENST00000522698 DIP2CQ9Y2E4 1556 aa21.3■■□□□ 1
EXTL3-211ENST00000522698 CEBPAP49715 358 aaPredicted RBP21.29■■□□□ 1
EXTL3-211ENST00000522698 PLXNC1O60486 1568 aa21.28■■□□□ 1
EXTL3-211ENST00000522698 MLH3Q9UHC1 1453 aa21.28■■□□□ 1
EXTL3-211ENST00000522698 MYT1LQ9UL68 1186 aa21.28■■□□□ 1
EXTL3-211ENST00000522698 ATP7AQ04656 1500 aa21.28■■□□□ 1
EXTL3-211ENST00000522698 RTEL1-TNFRSF6BF6WH68 1400 aa21.28■■□□□ 1
EXTL3-211ENST00000522698 ABCA6Q8N139 1617 aa21.27■■□□□ 1
EXTL3-211ENST00000522698 SETD1BQ9UPS6 1966 aaKnown RBP21.27■□□□□ 0.99
EXTL3-211ENST00000522698 ITGAEP38570 1179 aa21.25■□□□□ 0.99
EXTL3-211ENST00000522698 ROCK1Q13464 1354 aa21.24■□□□□ 0.99
EXTL3-211ENST00000522698 TSPY4P0CV99 314 aa21.24■□□□□ 0.99
EXTL3-211ENST00000522698 TSPY10P0CW01 314 aa21.24■□□□□ 0.99
EXTL3-211ENST00000522698 GCC2Q8IWJ2 1684 aa21.24■□□□□ 0.99
EXTL3-211ENST00000522698 SPAG9O60271 1321 aaKnown RBP21.24■□□□□ 0.99
EXTL3-211ENST00000522698 REREQ9P2R6 1566 aa21.23■□□□□ 0.99
EXTL3-211ENST00000522698 NCOA1Q15788 1441 aa21.22■□□□□ 0.99
EXTL3-211ENST00000522698 STRCQ7RTU9 1775 aa21.22■□□□□ 0.99
EXTL3-211ENST00000522698 DMRT2Q9Y5R5 561 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms