RNA–Protein interactions for RNA: ENST00000522121.5

TOP1MT-216, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 874 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-216ENST00000522121 POGZQ7Z3K3 1410 aa29.88■■■□□ 2.37
TOP1MT-216ENST00000522121 ADAMTSL3P82987 1691 aa29.87■■■□□ 2.37
TOP1MT-216ENST00000522121 FYCO1Q9BQS8 1478 aa29.87■■■□□ 2.37
TOP1MT-216ENST00000522121 ZFYVE16Q7Z3T8 1539 aa29.86■■■□□ 2.37
TOP1MT-216ENST00000522121 HECW2Q9P2P5 1572 aa29.86■■■□□ 2.37
TOP1MT-216ENST00000522121 ARHGAP5Q13017 1502 aa29.85■■■□□ 2.37
TOP1MT-216ENST00000522121 BCORL1Q5H9F3 1711 aa29.84■■■□□ 2.37
TOP1MT-216ENST00000522121 PTPRMP28827 1452 aa29.83■■■□□ 2.37
TOP1MT-216ENST00000522121 YEATS2Q9ULM3 1422 aa29.83■■■□□ 2.37
TOP1MT-216ENST00000522121 ZNF518AQ6AHZ1 1483 aa29.76■■■□□ 2.35
TOP1MT-216ENST00000522121 MADDQ8WXG6 1647 aa29.75■■■□□ 2.35
TOP1MT-216ENST00000522121 AFAP1Q8N556 730 aa29.72■■■□□ 2.35
TOP1MT-216ENST00000522121 ATP10AO60312 1499 aa29.72■■■□□ 2.35
TOP1MT-216ENST00000522121 MYT1LQ9UL68 1186 aa29.71■■■□□ 2.35
TOP1MT-216ENST00000522121 PREX2Q70Z35 1606 aa29.7■■■□□ 2.34
TOP1MT-216ENST00000522121 CDC42BPBQ9Y5S2 1711 aa29.69■■■□□ 2.34
TOP1MT-216ENST00000522121 C9orf84Q5VXU9 1444 aa29.68■■■□□ 2.34
TOP1MT-216ENST00000522121 MLECQ14165 292 aa29.67■■■□□ 2.34
TOP1MT-216ENST00000522121 KDM5CP41229 1560 aa29.66■■■□□ 2.34
TOP1MT-216ENST00000522121 RIMS1Q86UR5 1692 aaKnown RBP29.65■■■□□ 2.34
TOP1MT-216ENST00000522121 SIGLEC1Q9BZZ2 1709 aa29.64■■■□□ 2.34
TOP1MT-216ENST00000522121 CEP162Q5TB80 1403 aa29.63■■■□□ 2.33
TOP1MT-216ENST00000522121 ABCC1P33527 1531 aa29.61■■■□□ 2.33
TOP1MT-216ENST00000522121 MTUS2Q5JR59 1369 aa29.61■■■□□ 2.33
TOP1MT-216ENST00000522121 ZNF777Q9ULD5 760 aaPredicted RBP29.6■■■□□ 2.33
TOP1MT-216ENST00000522121 TRAPPC8Q9Y2L5 1435 aa29.59■■■□□ 2.33
TOP1MT-216ENST00000522121 MLH3Q9UHC1 1453 aa29.59■■■□□ 2.33
TOP1MT-216ENST00000522121 ARHGEF12Q9NZN5 1544 aa29.59■■■□□ 2.33
TOP1MT-216ENST00000522121 CDC42BPAQ5VT25 1732 aa29.59■■■□□ 2.33
TOP1MT-216ENST00000522121 PLPPR3Q6T4P5 718 aa29.58■■■□□ 2.33
TOP1MT-216ENST00000522121 GPATCH8Q9UKJ3 1502 aaKnown RBP29.56■■■□□ 2.32
TOP1MT-216ENST00000522121 CCNB3Q8WWL7 1395 aa29.55■■■□□ 2.32
TOP1MT-216ENST00000522121 ITSN2Q9NZM3 1697 aa29.54■■■□□ 2.32
TOP1MT-216ENST00000522121 CFDP1Q9UEE9 299 aaPredicted RBP29.54■■■□□ 2.32
TOP1MT-216ENST00000522121 DIP2CQ9Y2E4 1556 aa29.53■■■□□ 2.32
TOP1MT-216ENST00000522121 FER1L4A9Z1Z3 1794 aa29.52■■■□□ 2.32
TOP1MT-216ENST00000522121 LMTK3Q96Q04 1460 aa29.49■■■□□ 2.31
TOP1MT-216ENST00000522121 REREQ9P2R6 1566 aa29.49■■■□□ 2.31
TOP1MT-216ENST00000522121 SAMD9LQ8IVG5 1584 aa29.48■■■□□ 2.31
TOP1MT-216ENST00000522121 ABCA6Q8N139 1617 aa29.48■■■□□ 2.31
TOP1MT-216ENST00000522121 HNRNPMP52272 730 aaKnown RBP eCLIP29.47■■■□□ 2.31
TOP1MT-216ENST00000522121 PLEKHH2Q8IVE3 1493 aa29.47■■■□□ 2.31
TOP1MT-216ENST00000522121 EHBP1L1Q8N3D4 1523 aa29.46■■■□□ 2.31
TOP1MT-216ENST00000522121 KIAA1107Q9UPP5 1409 aa29.45■■■□□ 2.31
TOP1MT-216ENST00000522121 SYCP2Q9BX26 1530 aa29.45■■■□□ 2.31
TOP1MT-216ENST00000522121 LOC105371045A0A1W2PR82 267 aa29.45■■■□□ 2.31
TOP1MT-216ENST00000522121 SPAG9O60271 1321 aaKnown RBP29.45■■■□□ 2.3
TOP1MT-216ENST00000522121 AGLP35573 1532 aa29.42■■■□□ 2.3
TOP1MT-216ENST00000522121 KIDINS220Q9ULH0 1771 aa29.41■■■□□ 2.3
TOP1MT-216ENST00000522121 ILDR1Q86SU0 546 aaPredicted RBP29.41■■■□□ 2.3
TOP1MT-216ENST00000522121 ESF1Q9H501 851 aaKnown RBP29.41■■■□□ 2.3
TOP1MT-216ENST00000522121 CEBPAP49715 358 aaPredicted RBP29.38■■■□□ 2.29
TOP1MT-216ENST00000522121 HSPA2P54652 639 aa29.37■■■□□ 2.29
TOP1MT-216ENST00000522121 TIAM1Q13009 1591 aa29.37■■■□□ 2.29
TOP1MT-216ENST00000522121 ATP7AQ04656 1500 aa29.32■■■□□ 2.28
TOP1MT-216ENST00000522121 VPS8Q8N3P4 1428 aa29.32■■■□□ 2.28
TOP1MT-216ENST00000522121 ZNF644Q9H582 1327 aaPredicted RBP29.32■■■□□ 2.28
TOP1MT-216ENST00000522121 NCOA2Q15596 1464 aa29.29■■■□□ 2.28
TOP1MT-216ENST00000522121 CNTLNQ9NXG0 1405 aa29.28■■■□□ 2.28
TOP1MT-216ENST00000522121 SUPT6HQ7KZ85 1726 aaKnown RBP29.27■■■□□ 2.28
TOP1MT-216ENST00000522121 INO80Q9ULG1 1556 aaPredicted RBP29.26■■■□□ 2.28
TOP1MT-216ENST00000522121 PREX1Q8TCU6 1659 aa29.25■■■□□ 2.27
TOP1MT-216ENST00000522121 A2MP01023 1474 aa29.24■■■□□ 2.27
TOP1MT-216ENST00000522121 MBD5Q9P267 1494 aa29.24■■■□□ 2.27
TOP1MT-216ENST00000522121 UHRF1BP1Q6BDS2 1440 aa29.23■■■□□ 2.27
TOP1MT-216ENST00000522121 RTEL1-TNFRSF6BF6WH68 1400 aa29.2■■■□□ 2.26
TOP1MT-216ENST00000522121 C3P01024 1663 aa29.19■■■□□ 2.26
TOP1MT-216ENST00000522121 LRRC9Q6ZRR7 1453 aa29.19■■■□□ 2.26
TOP1MT-216ENST00000522121 RSPH4AQ5TD94 716 aa29.19■■■□□ 2.26
TOP1MT-216ENST00000522121 PLXNC1O60486 1568 aa29.18■■■□□ 2.26
TOP1MT-216ENST00000522121 CAMSAP2Q08AD1 1489 aa29.17■■■□□ 2.26
TOP1MT-216ENST00000522121 SETD1BQ9UPS6 1966 aaKnown RBP29.15■■■□□ 2.26
TOP1MT-216ENST00000522121 GGT6Q6P531 493 aa29.15■■■□□ 2.26
TOP1MT-216ENST00000522121 CCDC141Q6ZP82 1450 aa29.15■■■□□ 2.26
TOP1MT-216ENST00000522121 ADGBQ8N7X0 1667 aa29.15■■■□□ 2.26
TOP1MT-216ENST00000522121 MAP3K1Q13233 1512 aa29.14■■■□□ 2.25
TOP1MT-216ENST00000522121 FBXO41Q8TF61 875 aa29.13■■■□□ 2.25
TOP1MT-216ENST00000522121 ZMYM3Q14202 1370 aa29.13■■■□□ 2.25
TOP1MT-216ENST00000522121 PPP6R1Q9UPN7 881 aa29.12■■■□□ 2.25
TOP1MT-216ENST00000522121 MROH2AA6NES4 1674 aa29.11■■■□□ 2.25
TOP1MT-216ENST00000522121 KANK4Q5T7N3 995 aaPredicted RBP29.1■■■□□ 2.25
TOP1MT-216ENST00000522121 DMRT2Q9Y5R5 561 aa29.1■■■□□ 2.25
TOP1MT-216ENST00000522121 DHX29Q7Z478 1369 aaKnown RBP29.1■■■□□ 2.25
TOP1MT-216ENST00000522121 NPATQ14207 1427 aa29.09■■■□□ 2.25
TOP1MT-216ENST00000522121 TSPY4P0CV99 314 aa29.08■■■□□ 2.25
TOP1MT-216ENST00000522121 TSPY10P0CW01 314 aa29.08■■■□□ 2.25
TOP1MT-216ENST00000522121 APLP2Q06481 763 aa29.07■■■□□ 2.24
TOP1MT-216ENST00000522121 ARHGEF5Q12774 1597 aa29.04■■■□□ 2.24
TOP1MT-216ENST00000522121 CLTCQ00610 1675 aaKnown RBP29.03■■■□□ 2.24
TOP1MT-216ENST00000522121 KIF3BO15066 747 aa29.02■■■□□ 2.24
TOP1MT-216ENST00000522121 MYOM3Q5VTT5 1437 aa29■■■□□ 2.23
TOP1MT-216ENST00000522121 MIA2Q96PC5 1412 aa29■■■□□ 2.23
TOP1MT-216ENST00000522121 STRCQ7RTU9 1775 aa28.97■■■□□ 2.23
TOP1MT-216ENST00000522121 CERKQ8TCT0 537 aa28.96■■■□□ 2.23
TOP1MT-216ENST00000522121 PTPRKQ15262 1439 aa28.95■■■□□ 2.23
TOP1MT-216ENST00000522121 PTPRTO14522 1441 aa28.93■■■□□ 2.22
TOP1MT-216ENST00000522121 NCOA1Q15788 1441 aa28.91■■■□□ 2.22
TOP1MT-216ENST00000522121 WASHC2CQ9Y4E1 1318 aa28.91■■■□□ 2.22
TOP1MT-216ENST00000522121 FAM135AQ9P2D6 1515 aa28.89■■■□□ 2.22
TOP1MT-216ENST00000522121 MAST1Q9Y2H9 1570 aa28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms