RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 CFDP1Q9UEE9 299 aaPredicted RBP37.23■■■■□ 3.55
PVT1-212ENST00000521951 PPRC1Q5VV67 1664 aaKnown RBP37.23■■■■□ 3.55
PVT1-212ENST00000521951 ARHGAP5Q13017 1502 aa37.22■■■■□ 3.55
PVT1-212ENST00000521951 EFCAB2Q5VUJ9 269 aa37.19■■■■□ 3.54
PVT1-212ENST00000521951 FANCAO15360 1455 aa37.16■■■■□ 3.54
PVT1-212ENST00000521951 MIA2Q96PC5 1412 aa37.16■■■■□ 3.54
PVT1-212ENST00000521951 FGD6Q6ZV73 1430 aa37.14■■■■□ 3.54
PVT1-212ENST00000521951 TEX14Q8IWB6 1497 aa37.14■■■■□ 3.54
PVT1-212ENST00000521951 ZNF777Q9ULD5 760 aaPredicted RBP37.13■■■■□ 3.53
PVT1-212ENST00000521951 CFAP74Q9C0B2 1584 aa37.09■■■■□ 3.53
PVT1-212ENST00000521951 NEO1Q92859 1461 aa37.09■■■■□ 3.53
PVT1-212ENST00000521951 ZNF644Q9H582 1327 aaPredicted RBP37.09■■■■□ 3.53
PVT1-212ENST00000521951 SAMD9LQ8IVG5 1584 aa37.07■■■■□ 3.52
PVT1-212ENST00000521951 AKNAQ7Z591 1439 aa37.07■■■■□ 3.52
PVT1-212ENST00000521951 PTPN23Q9H3S7 1636 aa37.06■■■■□ 3.52
PVT1-212ENST00000521951 CAMSAP2Q08AD1 1489 aa37.02■■■■□ 3.52
PVT1-212ENST00000521951 RRBP1Q9P2E9 1410 aaKnown RBP37.01■■■■□ 3.52
PVT1-212ENST00000521951 TCOF1Q13428 1488 aaKnown RBP37■■■■□ 3.51
PVT1-212ENST00000521951 ADGRL1O94910 1474 aa36.98■■■■□ 3.51
PVT1-212ENST00000521951 ABCC1P33527 1531 aa36.97■■■■□ 3.51
PVT1-212ENST00000521951 PLEKHH2Q8IVE3 1493 aa36.97■■■■□ 3.51
PVT1-212ENST00000521951 FAM50AQ14320 339 aaKnown RBP36.96■■■■□ 3.51
PVT1-212ENST00000521951 SCAPERQ9BY12 1400 aa36.95■■■■□ 3.51
PVT1-212ENST00000521951 KIAA1107Q9UPP5 1409 aa36.95■■■■□ 3.51
PVT1-212ENST00000521951 ARHGEF12Q9NZN5 1544 aa36.94■■■■□ 3.5
PVT1-212ENST00000521951 HNRNPMP52272 730 aaKnown RBP eCLIP36.94■■■■□ 3.59e-7■■■■□ 20.3
PVT1-212ENST00000521951 SYCP2Q9BX26 1530 aa36.92■■■■□ 3.5
PVT1-212ENST00000521951 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.89■■■■□ 3.5
PVT1-212ENST00000521951 MBD5Q9P267 1494 aa36.89■■■■□ 3.5
PVT1-212ENST00000521951 DENND4BO75064 1496 aaPredicted RBP36.85■■■■□ 3.49
PVT1-212ENST00000521951 COL17A1Q9UMD9 1497 aaPredicted RBP36.85■■■■□ 3.49
PVT1-212ENST00000521951 TRAPPC8Q9Y2L5 1435 aa36.84■■■■□ 3.49
PVT1-212ENST00000521951 ARHGEF5Q12774 1597 aa36.83■■■■□ 3.49
PVT1-212ENST00000521951 RAPGEF3O95398 923 aa36.81■■■■□ 3.48
PVT1-212ENST00000521951 RSPH4AQ5TD94 716 aa36.81■■■■□ 3.48
PVT1-212ENST00000521951 AFAP1Q8N556 730 aa36.8■■■■□ 3.48
PVT1-212ENST00000521951 POGZQ7Z3K3 1410 aa36.8■■■■□ 3.48
PVT1-212ENST00000521951 DNMT1P26358 1616 aaKnown RBP36.78■■■■□ 3.48
PVT1-212ENST00000521951 RICTORQ6R327 1708 aa36.78■■■■□ 3.48
PVT1-212ENST00000521951 CCDC141Q6ZP82 1450 aa36.77■■■■□ 3.48
PVT1-212ENST00000521951 ZNF518AQ6AHZ1 1483 aa36.76■■■■□ 3.48
PVT1-212ENST00000521951 KDM6BO15054 1643 aa36.76■■■■□ 3.48
PVT1-212ENST00000521951 ABCC5O15440 1437 aa36.76■■■■□ 3.48
PVT1-212ENST00000521951 DAPK1P53355 1430 aa36.75■■■■□ 3.47
PVT1-212ENST00000521951 FRMPD1Q5SYB0 1578 aa36.74■■■■□ 3.47
PVT1-212ENST00000521951 ITGAEP38570 1179 aa36.72■■■■□ 3.47
PVT1-212ENST00000521951 KDM5CP41229 1560 aa36.7■■■■□ 3.47
PVT1-212ENST00000521951 TSPY4P0CV99 314 aa36.69■■■■□ 3.46
PVT1-212ENST00000521951 TSPY10P0CW01 314 aa36.69■■■■□ 3.46
PVT1-212ENST00000521951 CROCC2H7BZ55 1655 aa36.69■■■■□ 3.46
PVT1-212ENST00000521951 TRIM26Q12899 539 aaPredicted RBP36.68■■■■□ 3.46
PVT1-212ENST00000521951 PTPRKQ15262 1439 aa36.66■■■■□ 3.46
PVT1-212ENST00000521951 SPAG9O60271 1321 aaKnown RBP36.65■■■■□ 3.46
PVT1-212ENST00000521951 SHANK2Q9UPX8 1470 aa36.63■■■■□ 3.45
PVT1-212ENST00000521951 ZMYM4Q5VZL5 1548 aa36.62■■■■□ 3.45
PVT1-212ENST00000521951 CHIC2Q9UKJ5 165 aa36.62■■■■□ 3.45
PVT1-212ENST00000521951 C9orf84Q5VXU9 1444 aa36.62■■■■□ 3.45
PVT1-212ENST00000521951 MAST1Q9Y2H9 1570 aa36.61■■■■□ 3.45
PVT1-212ENST00000521951 MLH3Q9UHC1 1453 aa36.6■■■■□ 3.45
PVT1-212ENST00000521951 HECW2Q9P2P5 1572 aa36.59■■■■□ 3.45
PVT1-212ENST00000521951 MYT1LQ9UL68 1186 aa36.59■■■■□ 3.45
PVT1-212ENST00000521951 RTEL1-TNFRSF6BF6WH68 1400 aa36.58■■■■□ 3.45
PVT1-212ENST00000521951 INO80Q9ULG1 1556 aaPredicted RBP36.58■■■■□ 3.45
PVT1-212ENST00000521951 KIDINS220Q9ULH0 1771 aa36.57■■■■□ 3.44
PVT1-212ENST00000521951 ATP7AQ04656 1500 aa36.57■■■■□ 3.44
PVT1-212ENST00000521951 ZFYVE16Q7Z3T8 1539 aa36.56■■■■□ 3.44
PVT1-212ENST00000521951 MAGI2Q86UL8 1455 aa36.54■■■■□ 3.44
PVT1-212ENST00000521951 ADGBQ8N7X0 1667 aa36.51■■■■□ 3.44
PVT1-212ENST00000521951 ADGRL2O95490 1459 aa36.5■■■■□ 3.43
PVT1-212ENST00000521951 YEATS2Q9ULM3 1422 aa36.49■■■■□ 3.43
PVT1-212ENST00000521951 NCOA1Q15788 1441 aa36.48■■■■□ 3.43
PVT1-212ENST00000521951 ANKRD30AQ9BXX3 1397 aa36.48■■■■□ 3.43
PVT1-212ENST00000521951 ROCK1Q13464 1354 aa36.47■■■■□ 3.43
PVT1-212ENST00000521951 ABCA6Q8N139 1617 aa36.45■■■■□ 3.43
PVT1-212ENST00000521951 PLXNC1O60486 1568 aa36.45■■■■□ 3.43
PVT1-212ENST00000521951 RRP7BPQ9NSQ0 103 aa36.44■■■■□ 3.42
PVT1-212ENST00000521951 DIP2CQ9Y2E4 1556 aa36.43■■■■□ 3.42
PVT1-212ENST00000521951 ARHGEF40Q8TER5 1519 aa36.4■■■■□ 3.42
PVT1-212ENST00000521951 KIF15Q9NS87 1388 aa36.39■■■■□ 3.42
PVT1-212ENST00000521951 ATP10AO60312 1499 aa36.37■■■■□ 3.41
PVT1-212ENST00000521951 PCGF6Q9BYE7 350 aa36.33■■■■□ 3.41
PVT1-212ENST00000521951 A2MP01023 1474 aa36.32■■■■□ 3.41
PVT1-212ENST00000521951 DHX29Q7Z478 1369 aaKnown RBP36.32■■■■□ 3.4
PVT1-212ENST00000521951 DUOX2Q9NRD8 1548 aa36.32■■■■□ 3.4
PVT1-212ENST00000521951 HFM1A2PYH4 1435 aa36.31■■■■□ 3.4
PVT1-212ENST00000521951 NAIPQ13075 1403 aa36.31■■■■□ 3.4
PVT1-212ENST00000521951 GCC2Q8IWJ2 1684 aa36.27■■■■□ 3.4
PVT1-212ENST00000521951 REREQ9P2R6 1566 aa36.26■■■■□ 3.4
PVT1-212ENST00000521951 ANKRD50Q9ULJ7 1429 aa36.24■■■■□ 3.39
PVT1-212ENST00000521951 ERBINQ96RT1 1412 aa36.21■■■■□ 3.39
PVT1-212ENST00000521951 SIGLEC1Q9BZZ2 1709 aa36.21■■■■□ 3.39
PVT1-212ENST00000521951 SETD5Q9C0A6 1442 aa36.21■■■■□ 3.39
PVT1-212ENST00000521951 AGLP35573 1532 aa36.16■■■■□ 3.38
PVT1-212ENST00000521951 EIF2AK4Q9P2K8 1649 aaKnown RBP36.15■■■■□ 3.38
PVT1-212ENST00000521951 KIF3BO15066 747 aa36.15■■■■□ 3.38
PVT1-212ENST00000521951 BCORL1Q5H9F3 1711 aa36.11■■■■□ 3.37
PVT1-212ENST00000521951 ARID4BQ4LE39 1312 aaPredicted RBP36.11■■■■□ 3.37
PVT1-212ENST00000521951 RAB3GAP2Q9H2M9 1393 aa36.1■■■■□ 3.37
PVT1-212ENST00000521951 RNF17Q9BXT8 1623 aaKnown RBP36.03■■■■□ 3.36
PVT1-212ENST00000521951 GGT6Q6P531 493 aa36.03■■■■□ 3.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms