RNA–Protein interactions for RNA: ENST00000521550.5

SPIDR-214, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,849 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-214ENST00000521550 NEO1Q92859 1461 aa20.61■□□□□ 0.89
SPIDR-214ENST00000521550 FAM50AQ14320 339 aaKnown RBP20.6■□□□□ 0.89
SPIDR-214ENST00000521550 CCDC18Q5T9S5 1454 aa20.58■□□□□ 0.89
SPIDR-214ENST00000521550 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.58■□□□□ 0.88
SPIDR-214ENST00000521550 ADGRL1O94910 1474 aa20.57■□□□□ 0.88
SPIDR-214ENST00000521550 SETD5Q9C0A6 1442 aa20.57■□□□□ 0.88
SPIDR-214ENST00000521550 TTC37Q6PGP7 1564 aa20.55■□□□□ 0.88
SPIDR-214ENST00000521550 CDK11AQ9UQ88 783 aaPredicted RBP20.54■□□□□ 0.88
SPIDR-214ENST00000521550 EHBP1L1Q8N3D4 1523 aa20.53■□□□□ 0.88
SPIDR-214ENST00000521550 RAPGEF3O95398 923 aa20.53■□□□□ 0.88
SPIDR-214ENST00000521550 CFAP74Q9C0B2 1584 aa20.52■□□□□ 0.88
SPIDR-214ENST00000521550 RAB3GAP2Q9H2M9 1393 aa20.52■□□□□ 0.88
SPIDR-214ENST00000521550 LRRIQ1Q96JM4 1722 aa20.52■□□□□ 0.87
SPIDR-214ENST00000521550 FANCAO15360 1455 aa20.51■□□□□ 0.87
SPIDR-214ENST00000521550 SUPT6HQ7KZ85 1726 aaKnown RBP20.5■□□□□ 0.87
SPIDR-214ENST00000521550 FGD6Q6ZV73 1430 aa20.5■□□□□ 0.87
SPIDR-214ENST00000521550 AKNAQ7Z591 1439 aa20.48■□□□□ 0.87
SPIDR-214ENST00000521550 FRMPD1Q5SYB0 1578 aa20.47■□□□□ 0.87
SPIDR-214ENST00000521550 DENND4BO75064 1496 aaPredicted RBP20.46■□□□□ 0.87
SPIDR-214ENST00000521550 TROQ12816 1431 aaPredicted RBP20.46■□□□□ 0.87
SPIDR-214ENST00000521550 KIF14Q15058 1648 aa20.46■□□□□ 0.87
SPIDR-214ENST00000521550 MYO5CQ9NQX4 1742 aa20.45■□□□□ 0.86
SPIDR-214ENST00000521550 RICTORQ6R327 1708 aa20.45■□□□□ 0.86
SPIDR-214ENST00000521550 NCOA2Q15596 1464 aa20.45■□□□□ 0.86
SPIDR-214ENST00000521550 PLCH2O75038 1416 aa20.45■□□□□ 0.86
SPIDR-214ENST00000521550 MYOM3Q5VTT5 1437 aa20.45■□□□□ 0.86
SPIDR-214ENST00000521550 EFCAB2Q5VUJ9 269 aa20.39■□□□□ 0.85
SPIDR-214ENST00000521550 SCAPERQ9BY12 1400 aa20.37■□□□□ 0.85
SPIDR-214ENST00000521550 ARHGEF40Q8TER5 1519 aa20.36■□□□□ 0.85
SPIDR-214ENST00000521550 ZMYM4Q5VZL5 1548 aa20.36■□□□□ 0.85
SPIDR-214ENST00000521550 TIMELESSQ9UNS1 1208 aa20.35■□□□□ 0.85
SPIDR-214ENST00000521550 ARHGAP5Q13017 1502 aa20.35■□□□□ 0.85
SPIDR-214ENST00000521550 ARID4BQ4LE39 1312 aaPredicted RBP20.34■□□□□ 0.85
SPIDR-214ENST00000521550 POGZQ7Z3K3 1410 aa20.33■□□□□ 0.84
SPIDR-214ENST00000521550 CDC42BPBQ9Y5S2 1711 aa20.32■□□□□ 0.84
SPIDR-214ENST00000521550 CENPBP07199 599 aaPredicted RBP20.32■□□□□ 0.84
SPIDR-214ENST00000521550 PTPN23Q9H3S7 1636 aa20.32■□□□□ 0.84
SPIDR-214ENST00000521550 MIA2Q96PC5 1412 aa20.32■□□□□ 0.84
SPIDR-214ENST00000521550 MAGI2Q86UL8 1455 aa20.32■□□□□ 0.84
SPIDR-214ENST00000521550 HFM1A2PYH4 1435 aa20.31■□□□□ 0.84
SPIDR-214ENST00000521550 ZFYVE16Q7Z3T8 1539 aa20.31■□□□□ 0.84
SPIDR-214ENST00000521550 BCORL1Q5H9F3 1711 aa20.3■□□□□ 0.84
SPIDR-214ENST00000521550 ADAMTSL3P82987 1691 aa20.3■□□□□ 0.84
SPIDR-214ENST00000521550 ACIN1Q9UKV3 1341 aaKnown RBP20.3■□□□□ 0.84
SPIDR-214ENST00000521550 PREX2Q70Z35 1606 aa20.29■□□□□ 0.84
SPIDR-214ENST00000521550 TCOF1Q13428 1488 aaKnown RBP20.29■□□□□ 0.84
SPIDR-214ENST00000521550 YEATS2Q9ULM3 1422 aa20.28■□□□□ 0.84
SPIDR-214ENST00000521550 CDC42BPAQ5VT25 1732 aa20.27■□□□□ 0.84
SPIDR-214ENST00000521550 ZNF518AQ6AHZ1 1483 aa20.26■□□□□ 0.83
SPIDR-214ENST00000521550 MADDQ8WXG6 1647 aa20.24■□□□□ 0.83
SPIDR-214ENST00000521550 PTPRMP28827 1452 aa20.23■□□□□ 0.83
SPIDR-214ENST00000521550 HECW2Q9P2P5 1572 aa20.22■□□□□ 0.83
SPIDR-214ENST00000521550 AFAP1Q8N556 730 aa20.22■□□□□ 0.83
SPIDR-214ENST00000521550 SIGLEC1Q9BZZ2 1709 aa20.22■□□□□ 0.83
SPIDR-214ENST00000521550 KDM5CP41229 1560 aa20.21■□□□□ 0.83
SPIDR-214ENST00000521550 ABCC1P33527 1531 aa20.2■□□□□ 0.82
SPIDR-214ENST00000521550 ATP10AO60312 1499 aa20.2■□□□□ 0.82
SPIDR-214ENST00000521550 NAIPQ13075 1403 aa20.2■□□□□ 0.82
SPIDR-214ENST00000521550 PTPRKQ15262 1439 aa20.19■□□□□ 0.82
SPIDR-214ENST00000521550 MYT1LQ9UL68 1186 aa20.19■□□□□ 0.82
SPIDR-214ENST00000521550 ITSN2Q9NZM3 1697 aa20.19■□□□□ 0.82
SPIDR-214ENST00000521550 C9orf84Q5VXU9 1444 aa20.18■□□□□ 0.82
SPIDR-214ENST00000521550 RIMS1Q86UR5 1692 aaKnown RBP20.18■□□□□ 0.82
SPIDR-214ENST00000521550 GPATCH8Q9UKJ3 1502 aaKnown RBP20.17■□□□□ 0.82
SPIDR-214ENST00000521550 NEUROD1Q13562 356 aa20.17■□□□□ 0.82
SPIDR-214ENST00000521550 ARHGEF12Q9NZN5 1544 aa20.17■□□□□ 0.82
SPIDR-214ENST00000521550 ZNF777Q9ULD5 760 aaPredicted RBP20.16■□□□□ 0.82
SPIDR-214ENST00000521550 TRAPPC8Q9Y2L5 1435 aa20.15■□□□□ 0.82
SPIDR-214ENST00000521550 MLECQ14165 292 aa20.15■□□□□ 0.82
SPIDR-214ENST00000521550 MLH3Q9UHC1 1453 aa20.14■□□□□ 0.81
SPIDR-214ENST00000521550 SAMD9LQ8IVG5 1584 aa20.14■□□□□ 0.81
SPIDR-214ENST00000521550 GCC2Q8IWJ2 1684 aa20.14■□□□□ 0.81
SPIDR-214ENST00000521550 FER1L4A9Z1Z3 1794 aa20.13■□□□□ 0.81
SPIDR-214ENST00000521550 CFDP1Q9UEE9 299 aaPredicted RBP20.13■□□□□ 0.81
SPIDR-214ENST00000521550 DIP2CQ9Y2E4 1556 aa20.12■□□□□ 0.81
SPIDR-214ENST00000521550 MIER1Q8N108 512 aa20.12■□□□□ 0.81
SPIDR-214ENST00000521550 SIN3AQ96ST3 1273 aa20.12■□□□□ 0.81
SPIDR-214ENST00000521550 ABCA6Q8N139 1617 aa20.11■□□□□ 0.81
SPIDR-214ENST00000521550 SYCP2Q9BX26 1530 aa20.1■□□□□ 0.81
SPIDR-214ENST00000521550 TONSLQ96HA7 1378 aa20.1■□□□□ 0.81
SPIDR-214ENST00000521550 ROCK1Q13464 1354 aa20.1■□□□□ 0.81
SPIDR-214ENST00000521550 REREQ9P2R6 1566 aa20.09■□□□□ 0.81
SPIDR-214ENST00000521550 KIDINS220Q9ULH0 1771 aa20.09■□□□□ 0.81
SPIDR-214ENST00000521550 PLEKHH2Q8IVE3 1493 aa20.08■□□□□ 0.8
SPIDR-214ENST00000521550 HNRNPMP52272 730 aaKnown RBP eCLIP20.07■□□□□ 0.83e-6■■■■□ 25.9
SPIDR-214ENST00000521550 RRP7BPQ9NSQ0 103 aa20.07■□□□□ 0.8
SPIDR-214ENST00000521550 CHIC2Q9UKJ5 165 aa20.07■□□□□ 0.8
SPIDR-214ENST00000521550 KIAA1107Q9UPP5 1409 aa20.07■□□□□ 0.8
SPIDR-214ENST00000521550 PLPPR3Q6T4P5 718 aa20.06■□□□□ 0.8
SPIDR-214ENST00000521550 DAPK1P53355 1430 aa20.05■□□□□ 0.8
SPIDR-214ENST00000521550 DNMT1P26358 1616 aaKnown RBP20.05■□□□□ 0.8
SPIDR-214ENST00000521550 PPP1R15AO75807 674 aaPredicted RBP20.05■□□□□ 0.8
SPIDR-214ENST00000521550 TRIM52Q96A61 297 aa20.04■□□□□ 0.8
SPIDR-214ENST00000521550 SPAG9O60271 1321 aaKnown RBP20.03■□□□□ 0.8
SPIDR-214ENST00000521550 AGLP35573 1532 aa20.02■□□□□ 0.79
SPIDR-214ENST00000521550 LMTK3Q96Q04 1460 aa20■□□□□ 0.79
SPIDR-214ENST00000521550 ATP7AQ04656 1500 aa19.99■□□□□ 0.79
SPIDR-214ENST00000521550 ZNF644Q9H582 1327 aaPredicted RBP19.99■□□□□ 0.79
SPIDR-214ENST00000521550 ABCC5O15440 1437 aa19.99■□□□□ 0.79
SPIDR-214ENST00000521550 INO80Q9ULG1 1556 aaPredicted RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms