RNA–Protein interactions for RNA: ENST00000521260.1

NPM1-207, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-207ENST00000521260 WASHC2AQ641Q2 1341 aa6.97□□□□□ -1.29
NPM1-207ENST00000521260 A0A0U1RQG5 324 aaPredicted RBP6.96□□□□□ -1.3
NPM1-207ENST00000521260 CENPJQ9HC77 1338 aaPredicted RBP6.96□□□□□ -1.3
NPM1-207ENST00000521260 PYGBP11216 843 aa6.95□□□□□ -1.3
NPM1-207ENST00000521260 CALD1Q05682 793 aaKnown RBP6.95□□□□□ -1.3
NPM1-207ENST00000521260 CNGB1Q14028 1251 aaPredicted RBP6.95□□□□□ -1.3
NPM1-207ENST00000521260 NPM2Q86SE8 214 aaKnown RBP6.95□□□□□ -1.3
NPM1-207ENST00000521260 P3H3Q8IVL6 736 aa6.95□□□□□ -1.3
NPM1-207ENST00000521260 HSP90B1P14625 803 aaKnown RBP6.94□□□□□ -1.3
NPM1-207ENST00000521260 ANP32BQ92688 251 aaKnown RBP6.94□□□□□ -1.3
NPM1-207ENST00000521260 ARID4BQ4LE39 1312 aaPredicted RBP6.94□□□□□ -1.3
NPM1-207ENST00000521260 NEFMP07197 916 aa6.93□□□□□ -1.3
NPM1-207ENST00000521260 CADPS2Q86UW7 1296 aa6.92□□□□□ -1.3
NPM1-207ENST00000521260 IPO9Q96P70 1041 aaKnown RBP6.92□□□□□ -1.3
NPM1-207ENST00000521260 PITPNM1O00562 1244 aa6.91□□□□□ -1.3
NPM1-207ENST00000521260 HMGB1P09429 215 aaKnown RBP6.91□□□□□ -1.3
NPM1-207ENST00000521260 TMEM132AQ24JP5 1023 aa6.91□□□□□ -1.3
NPM1-207ENST00000521260 ZNF467Q7Z7K2 595 aaPredicted RBP6.91□□□□□ -1.3
NPM1-207ENST00000521260 KCNV2Q8TDN2 545 aa6.91□□□□□ -1.3
NPM1-207ENST00000521260 IPO4Q8TEX9 1081 aaKnown RBP6.91□□□□□ -1.3
NPM1-207ENST00000521260 MAP7D2Q96T17 732 aa6.91□□□□□ -1.3
NPM1-207ENST00000521260 ARID3AQ99856 593 aa6.91□□□□□ -1.3
NPM1-207ENST00000521260 TULP1O00294 542 aaPredicted RBP6.9□□□□□ -1.3
NPM1-207ENST00000521260 CANXP27824 592 aaKnown RBP6.9□□□□□ -1.3
NPM1-207ENST00000521260 CDK11BP21127 795 aaKnown RBP6.89□□□□□ -1.31
NPM1-207ENST00000521260 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.89□□□□□ -1.31
NPM1-207ENST00000521260 PDCL3Q9H2J4 239 aa6.89□□□□□ -1.31
NPM1-207ENST00000521260 PPP4R2Q9NY27 417 aa6.89□□□□□ -1.31
NPM1-207ENST00000521260 TNNT2P45379 298 aaPredicted RBP6.88□□□□□ -1.31
NPM1-207ENST00000521260 PDAP1Q13442 181 aaKnown RBP6.88□□□□□ -1.31
NPM1-207ENST00000521260 EEA1Q15075 1411 aa6.87□□□□□ -1.31
NPM1-207ENST00000521260 MFRPQ9BY79 579 aa6.87□□□□□ -1.31
NPM1-207ENST00000521260 PTMSP20962 102 aa6.86□□□□□ -1.31
NPM1-207ENST00000521260 TAF3Q5VWG9 929 aa6.86□□□□□ -1.31
NPM1-207ENST00000521260 MTERF4Q7Z6M4 381 aaKnown RBP6.86□□□□□ -1.31
NPM1-207ENST00000521260 NAP1L2Q9ULW6 460 aaPredicted RBP6.86□□□□□ -1.31
NPM1-207ENST00000521260 TPM2P07951 284 aa6.85□□□□□ -1.31
NPM1-207ENST00000521260 L1TD1Q5T7N2 865 aaKnown RBP6.85□□□□□ -1.31
NPM1-207ENST00000521260 LMOD2Q6P5Q4 547 aa6.85□□□□□ -1.31
NPM1-207ENST00000521260 DDRGK1Q96HY6 314 aa6.85□□□□□ -1.31
NPM1-207ENST00000521260 CCDC61Q9Y6R9 512 aa6.85□□□□□ -1.31
NPM1-207ENST00000521260 CCER2I3L3R5 266 aa6.84□□□□□ -1.31
NPM1-207ENST00000521260 C14orf37Q86TY3 774 aa6.84□□□□□ -1.31
NPM1-207ENST00000521260 TEX2Q8IWB9 1127 aa6.84□□□□□ -1.31
NPM1-207ENST00000521260 ZNF579Q8NAF0 562 aaKnown RBP6.84□□□□□ -1.31
NPM1-207ENST00000521260 TRIM44Q96DX7 344 aaPredicted RBP6.84□□□□□ -1.31
NPM1-207ENST00000521260 SHROOM4Q9ULL8 1493 aa6.84□□□□□ -1.31
NPM1-207ENST00000521260 FTSJ3Q8IY81 847 aaKnown RBP6.83□□□□□ -1.32
NPM1-207ENST00000521260 PNNQ9H307 717 aaKnown RBP6.83□□□□□ -1.32
NPM1-207ENST00000521260 WDR70Q9NW82 654 aa6.83□□□□□ -1.32
NPM1-207ENST00000521260 PSEN1P49768 467 aa6.82□□□□□ -1.32
NPM1-207ENST00000521260 FBXO22Q8NEZ5 403 aa6.82□□□□□ -1.32
NPM1-207ENST00000521260 ARHGEF1Q92888 912 aaKnown RBP6.82□□□□□ -1.32
NPM1-207ENST00000521260 CHMP4AQ9BY43 222 aa6.82□□□□□ -1.32
NPM1-207ENST00000521260 TSPYL2Q9H2G4 693 aaPredicted RBP6.82□□□□□ -1.32
NPM1-207ENST00000521260 FARP1Q9Y4F1 1045 aaPredicted RBP6.82□□□□□ -1.32
NPM1-207ENST00000521260 LAS1LQ9Y4W2 734 aaKnown RBP6.82□□□□□ -1.32
NPM1-207ENST00000521260 SMAP1Q8IYB5 467 aaPredicted RBP6.81□□□□□ -1.32
NPM1-207ENST00000521260 PCDHB8Q9UN66 801 aa6.81□□□□□ -1.32
NPM1-207ENST00000521260 PCDHB13Q9Y5F0 798 aa6.81□□□□□ -1.32
NPM1-207ENST00000521260 WRNQ14191 1432 aaPredicted RBP eCLIP6.81□□□□□ -1.32
NPM1-207ENST00000521260 CHADLQ6NUI6 762 aa6.8□□□□□ -1.32
NPM1-207ENST00000521260 PPP1R37O75864 691 aa6.79□□□□□ -1.32
NPM1-207ENST00000521260 PTMAP06454 111 aaKnown RBP6.78□□□□□ -1.32
NPM1-207ENST00000521260 TESPA1A2RU30 521 aaPredicted RBP6.77□□□□□ -1.33
NPM1-207ENST00000521260 SOX12O15370 315 aa6.77□□□□□ -1.33
NPM1-207ENST00000521260 CLCN1P35523 988 aa6.77□□□□□ -1.33
NPM1-207ENST00000521260 ITGAEP38570 1179 aa6.77□□□□□ -1.33
NPM1-207ENST00000521260 BRPF1P55201 1214 aaPredicted RBP6.77□□□□□ -1.33
NPM1-207ENST00000521260 AXDND1Q5T1B0 1012 aaPredicted RBP6.77□□□□□ -1.33
NPM1-207ENST00000521260 UTP14CQ5TAP6 766 aaKnown RBP6.77□□□□□ -1.33
NPM1-207ENST00000521260 BRPF3Q9ULD4 1205 aa6.77□□□□□ -1.33
NPM1-207ENST00000521260 GOLGA6L3A6NEY3 463 aa6.76□□□□□ -1.33
NPM1-207ENST00000521260 TERF1P54274 439 aa6.76□□□□□ -1.33
NPM1-207ENST00000521260 E2F4Q16254 413 aa6.76□□□□□ -1.33
NPM1-207ENST00000521260 ZC3H15Q8WU90 426 aaKnown RBP6.76□□□□□ -1.33
NPM1-207ENST00000521260 PRDM4Q9UKN5 801 aa6.76□□□□□ -1.33
NPM1-207ENST00000521260 ARIH1Q9Y4X5 557 aaPredicted RBP6.76□□□□□ -1.33
NPM1-207ENST00000521260 CLGNO14967 610 aa6.75□□□□□ -1.33
NPM1-207ENST00000521260 NLRP6P59044 892 aa6.75□□□□□ -1.33
NPM1-207ENST00000521260 IFNL1Q8IU54 200 aa6.75□□□□□ -1.33
NPM1-207ENST00000521260 PAK3O75914 559 aaPredicted RBP6.74□□□□□ -1.33
NPM1-207ENST00000521260 KIF20AO95235 890 aa6.74□□□□□ -1.33
NPM1-207ENST00000521260 FXR2P51116 673 aaKnown RBP eCLIP6.74□□□□□ -1.33
NPM1-207ENST00000521260 MFSD10Q14728 455 aa6.74□□□□□ -1.33
NPM1-207ENST00000521260 EFCAB3Q8N7B9 438 aa6.74□□□□□ -1.33
NPM1-207ENST00000521260 NCKAP5LQ9HCH0 1330 aa6.74□□□□□ -1.33
NPM1-207ENST00000521260 KIF12Q96FN5 646 aa6.73□□□□□ -1.33
NPM1-207ENST00000521260 PHF8Q9UPP1 1060 aa6.73□□□□□ -1.33
NPM1-207ENST00000521260 SEMA3EO15041 775 aa6.72□□□□□ -1.33
NPM1-207ENST00000521260 ANP32CO43423 234 aa6.72□□□□□ -1.33
NPM1-207ENST00000521260 POLR3GLQ9BT43 218 aa6.72□□□□□ -1.33
NPM1-207ENST00000521260 MAP3K13O43283 966 aa6.71□□□□□ -1.34
NPM1-207ENST00000521260 PRKAR2AP13861 404 aaKnown RBP6.71□□□□□ -1.34
NPM1-207ENST00000521260 GTF2E1P29083 439 aaPredicted RBP6.71□□□□□ -1.34
NPM1-207ENST00000521260 DHX37Q8IY37 1157 aaKnown RBP6.71□□□□□ -1.34
NPM1-207ENST00000521260 ZNF622Q969S3 477 aaKnown RBP eCLIP6.71□□□□□ -1.348e-44■□□□□ 8.7
NPM1-207ENST00000521260 STAC3Q96MF2 364 aa6.71□□□□□ -1.34
NPM1-207ENST00000521260 CRISPLD2Q9H0B8 497 aa6.71□□□□□ -1.34
NPM1-207ENST00000521260 ISY1Q9ULR0 285 aaKnown RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms