RNA–Protein interactions for RNA: ENST00000520895.5

HDAC2-209, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-209ENST00000520895 CDC42BPBQ9Y5S2 1711 aa24.27■■□□□ 1.48
HDAC2-209ENST00000520895 SUPT6HQ7KZ85 1726 aaKnown RBP24.25■■□□□ 1.47
HDAC2-209ENST00000520895 LRRC9Q6ZRR7 1453 aa24.24■■□□□ 1.47
HDAC2-209ENST00000520895 CCNB3Q8WWL7 1395 aa24.23■■□□□ 1.47
HDAC2-209ENST00000520895 ADGRL1O94910 1474 aa24.22■■□□□ 1.47
HDAC2-209ENST00000520895 RAPGEF3O95398 923 aa24.21■■□□□ 1.47
HDAC2-209ENST00000520895 FRMPD1Q5SYB0 1578 aa24.2■■□□□ 1.47
HDAC2-209ENST00000520895 GPATCH8Q9UKJ3 1502 aaKnown RBP24.2■■□□□ 1.47
HDAC2-209ENST00000520895 DENND4BO75064 1496 aaPredicted RBP24.2■■□□□ 1.47
HDAC2-209ENST00000520895 NCOA2Q15596 1464 aa24.19■■□□□ 1.46
HDAC2-209ENST00000520895 ITSN2Q9NZM3 1697 aa24.18■■□□□ 1.46
HDAC2-209ENST00000520895 KANK4Q5T7N3 995 aaPredicted RBP24.18■■□□□ 1.46
HDAC2-209ENST00000520895 SCAPERQ9BY12 1400 aa24.18■■□□□ 1.46
HDAC2-209ENST00000520895 RICTORQ6R327 1708 aa24.17■■□□□ 1.46
HDAC2-209ENST00000520895 CFDP1Q9UEE9 299 aaPredicted RBP24.16■■□□□ 1.46
HDAC2-209ENST00000520895 ZNF777Q9ULD5 760 aaPredicted RBP24.16■■□□□ 1.46
HDAC2-209ENST00000520895 POGZQ7Z3K3 1410 aa24.1■■□□□ 1.45
HDAC2-209ENST00000520895 ABCC1P33527 1531 aa24.1■■□□□ 1.45
HDAC2-209ENST00000520895 SAMD9LQ8IVG5 1584 aa24.09■■□□□ 1.45
HDAC2-209ENST00000520895 ZMYM4Q5VZL5 1548 aa24.07■■□□□ 1.44
HDAC2-209ENST00000520895 ZNF518AQ6AHZ1 1483 aa24.07■■□□□ 1.44
HDAC2-209ENST00000520895 PLEKHH2Q8IVE3 1493 aa24.06■■□□□ 1.44
HDAC2-209ENST00000520895 KDM4FA0A1W2PPD8 638 aa24.05■■□□□ 1.44
HDAC2-209ENST00000520895 ARHGEF12Q9NZN5 1544 aa24.04■■□□□ 1.44
HDAC2-209ENST00000520895 AFAP1Q8N556 730 aa24.03■■□□□ 1.44
HDAC2-209ENST00000520895 SYCP2Q9BX26 1530 aa24.03■■□□□ 1.44
HDAC2-209ENST00000520895 MAGI2Q86UL8 1455 aa24.02■■□□□ 1.44
HDAC2-209ENST00000520895 MYT1LQ9UL68 1186 aa24.02■■□□□ 1.44
HDAC2-209ENST00000520895 HNRNPMP52272 730 aaKnown RBP eCLIP24.01■■□□□ 1.43
HDAC2-209ENST00000520895 KIAA1107Q9UPP5 1409 aa24.01■■□□□ 1.43
HDAC2-209ENST00000520895 TRAPPC8Q9Y2L5 1435 aa24.01■■□□□ 1.43
HDAC2-209ENST00000520895 ZFYVE16Q7Z3T8 1539 aa24■■□□□ 1.43
HDAC2-209ENST00000520895 ZNF644Q9H582 1327 aaPredicted RBP24■■□□□ 1.43
HDAC2-209ENST00000520895 ARHGEF40Q8TER5 1519 aa24■■□□□ 1.43
HDAC2-209ENST00000520895 KDM5CP41229 1560 aa23.99■■□□□ 1.43
HDAC2-209ENST00000520895 MYOM3Q5VTT5 1437 aa23.99■■□□□ 1.43
HDAC2-209ENST00000520895 CAMSAP2Q08AD1 1489 aa23.97■■□□□ 1.43
HDAC2-209ENST00000520895 HECW2Q9P2P5 1572 aa23.96■■□□□ 1.43
HDAC2-209ENST00000520895 YEATS2Q9ULM3 1422 aa23.95■■□□□ 1.42
HDAC2-209ENST00000520895 MIA2Q96PC5 1412 aa23.94■■□□□ 1.42
HDAC2-209ENST00000520895 MLH3Q9UHC1 1453 aa23.93■■□□□ 1.42
HDAC2-209ENST00000520895 SPAG9O60271 1321 aaKnown RBP23.91■■□□□ 1.42
HDAC2-209ENST00000520895 AEBP2Q6ZN18 517 aaPredicted RBP23.91■■□□□ 1.42
HDAC2-209ENST00000520895 SIGLEC1Q9BZZ2 1709 aa23.9■■□□□ 1.42
HDAC2-209ENST00000520895 ARID4BQ4LE39 1312 aaPredicted RBP23.9■■□□□ 1.42
HDAC2-209ENST00000520895 MBD5Q9P267 1494 aa23.9■■□□□ 1.42
HDAC2-209ENST00000520895 ATP10AO60312 1499 aa23.89■■□□□ 1.42
HDAC2-209ENST00000520895 PPARGC1BQ86YN6 1023 aaKnown RBP23.89■■□□□ 1.41
HDAC2-209ENST00000520895 KIDINS220Q9ULH0 1771 aa23.88■■□□□ 1.41
HDAC2-209ENST00000520895 RSPH4AQ5TD94 716 aa23.88■■□□□ 1.41
HDAC2-209ENST00000520895 PTPN23Q9H3S7 1636 aa23.87■■□□□ 1.41
HDAC2-209ENST00000520895 CCDC141Q6ZP82 1450 aa23.87■■□□□ 1.41
HDAC2-209ENST00000520895 ADAMTSL3P82987 1691 aa23.86■■□□□ 1.41
HDAC2-209ENST00000520895 FGD6Q6ZV73 1430 aa23.86■■□□□ 1.41
HDAC2-209ENST00000520895 ABCA6Q8N139 1617 aa23.86■■□□□ 1.41
HDAC2-209ENST00000520895 ARHGEF5Q12774 1597 aa23.86■■□□□ 1.41
HDAC2-209ENST00000520895 DIP2CQ9Y2E4 1556 aa23.86■■□□□ 1.41
HDAC2-209ENST00000520895 C9orf84Q5VXU9 1444 aa23.85■■□□□ 1.41
HDAC2-209ENST00000520895 BCORL1Q5H9F3 1711 aa23.85■■□□□ 1.41
HDAC2-209ENST00000520895 ATP7AQ04656 1500 aa23.84■■□□□ 1.41
HDAC2-209ENST00000520895 INO80Q9ULG1 1556 aaPredicted RBP23.84■■□□□ 1.41
HDAC2-209ENST00000520895 TSPY4P0CV99 314 aa23.81■■□□□ 1.4
HDAC2-209ENST00000520895 TSPY10P0CW01 314 aa23.81■■□□□ 1.4
HDAC2-209ENST00000520895 REREQ9P2R6 1566 aa23.79■■□□□ 1.4
HDAC2-209ENST00000520895 TCOF1Q13428 1488 aaKnown RBP23.79■■□□□ 1.4
HDAC2-209ENST00000520895 RTEL1-TNFRSF6BF6WH68 1400 aa23.78■■□□□ 1.4
HDAC2-209ENST00000520895 ADGBQ8N7X0 1667 aa23.76■■□□□ 1.39
HDAC2-209ENST00000520895 FAM50AQ14320 339 aaKnown RBP23.75■■□□□ 1.39
HDAC2-209ENST00000520895 MLECQ14165 292 aa23.74■■□□□ 1.39
HDAC2-209ENST00000520895 MADDQ8WXG6 1647 aa23.73■■□□□ 1.39
HDAC2-209ENST00000520895 A2MP01023 1474 aa23.72■■□□□ 1.39
HDAC2-209ENST00000520895 MAST1Q9Y2H9 1570 aa23.72■■□□□ 1.39
HDAC2-209ENST00000520895 DNMT1P26358 1616 aaKnown RBP23.72■■□□□ 1.39
HDAC2-209ENST00000520895 CROCC2H7BZ55 1655 aa23.72■■□□□ 1.39
HDAC2-209ENST00000520895 AGLP35573 1532 aa23.7■■□□□ 1.38
HDAC2-209ENST00000520895 ABCC5O15440 1437 aa23.7■■□□□ 1.38
HDAC2-209ENST00000520895 DAPK1P53355 1430 aa23.7■■□□□ 1.38
HDAC2-209ENST00000520895 PLXNC1O60486 1568 aa23.67■■□□□ 1.38
HDAC2-209ENST00000520895 PTPRMP28827 1452 aa23.67■■□□□ 1.38
HDAC2-209ENST00000520895 SHANK2Q9UPX8 1470 aa23.67■■□□□ 1.38
HDAC2-209ENST00000520895 FER1L4A9Z1Z3 1794 aa23.66■■□□□ 1.38
HDAC2-209ENST00000520895 RIMS1Q86UR5 1692 aaKnown RBP23.64■■□□□ 1.38
HDAC2-209ENST00000520895 DHX29Q7Z478 1369 aaKnown RBP23.64■■□□□ 1.37
HDAC2-209ENST00000520895 CHIC2Q9UKJ5 165 aa23.61■■□□□ 1.37
HDAC2-209ENST00000520895 ESF1Q9H501 851 aaKnown RBP23.6■■□□□ 1.37
HDAC2-209ENST00000520895 ANKRD30AQ9BXX3 1397 aa23.58■■□□□ 1.37
HDAC2-209ENST00000520895 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.58■■□□□ 1.37
HDAC2-209ENST00000520895 GGT6Q6P531 493 aa23.57■■□□□ 1.36
HDAC2-209ENST00000520895 RRP7BPQ9NSQ0 103 aa23.57■■□□□ 1.36
HDAC2-209ENST00000520895 DUOX2Q9NRD8 1548 aa23.57■■□□□ 1.36
HDAC2-209ENST00000520895 RRBP1Q9P2E9 1410 aaKnown RBP23.57■■□□□ 1.36
HDAC2-209ENST00000520895 KIF15Q9NS87 1388 aa23.56■■□□□ 1.36
HDAC2-209ENST00000520895 KIF3BO15066 747 aa23.56■■□□□ 1.36
HDAC2-209ENST00000520895 ITGAEP38570 1179 aa23.55■■□□□ 1.36
HDAC2-209ENST00000520895 PLPPR3Q6T4P5 718 aa23.54■■□□□ 1.36
HDAC2-209ENST00000520895 EIF2AK4Q9P2K8 1649 aaKnown RBP23.52■■□□□ 1.36
HDAC2-209ENST00000520895 NCOA1Q15788 1441 aa23.51■■□□□ 1.35
HDAC2-209ENST00000520895 ADGRL2O95490 1459 aa23.51■■□□□ 1.35
HDAC2-209ENST00000520895 CNTLNQ9NXG0 1405 aa23.5■■□□□ 1.35
HDAC2-209ENST00000520895 PTPRKQ15262 1439 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms