RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 HOXB3P14651 431 aaPredicted RBP13.89□□□□□ -0.19
PABPC1-216ENST00000520868 SNPHO15079 494 aa13.88□□□□□ -0.19
PABPC1-216ENST00000520868 MARVELD3Q96A59 401 aa13.84□□□□□ -0.19
PABPC1-216ENST00000520868 C2orf72A6NCS6 295 aa13.8□□□□□ -0.2
PABPC1-216ENST00000520868 GTPBP6O43824 516 aaPredicted RBP13.79□□□□□ -0.2
PABPC1-216ENST00000520868 KIF3CO14782 793 aa13.78□□□□□ -0.2
PABPC1-216ENST00000520868 BBXQ8WY36 941 aaPredicted RBP13.77□□□□□ -0.21
PABPC1-216ENST00000520868 DOK7Q18PE1 504 aa13.74□□□□□ -0.21
PABPC1-216ENST00000520868 PCDH10Q9P2E7 1040 aa13.74□□□□□ -0.21
PABPC1-216ENST00000520868 ZNF710Q8N1W2 664 aa13.72□□□□□ -0.21
PABPC1-216ENST00000520868 POTEB3A0JP26 581 aa13.7□□□□□ -0.22
PABPC1-216ENST00000520868 EMP3P54852 163 aa13.7□□□□□ -0.22
PABPC1-216ENST00000520868 POTEBQ6S5H4 581 aa13.7□□□□□ -0.22
PABPC1-216ENST00000520868 TMC2Q8TDI7 906 aa13.7□□□□□ -0.22
PABPC1-216ENST00000520868 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.7□□□□□ -0.22
PABPC1-216ENST00000520868 HOXB1P14653 301 aaPredicted RBP13.67□□□□□ -0.22
PABPC1-216ENST00000520868 CDAN1Q8IWY9 1227 aa13.67□□□□□ -0.22
PABPC1-216ENST00000520868 FAM205CA6NFA0 338 aa13.66□□□□□ -0.22
PABPC1-216ENST00000520868 KHSRPQ92945 711 aaKnown RBP eCLIP13.66□□□□□ -0.224e-10■■□□□ 14.4
PABPC1-216ENST00000520868 GPR153Q6NV75 609 aa13.65□□□□□ -0.22
PABPC1-216ENST00000520868 ARSIQ5FYB1 569 aa13.63□□□□□ -0.23
PABPC1-216ENST00000520868 RIMBP2O15034 1052 aa13.62□□□□□ -0.23
PABPC1-216ENST00000520868 HS3ST6Q96QI5 342 aa13.62□□□□□ -0.23
PABPC1-216ENST00000520868 DSG2Q14126 1118 aa13.61□□□□□ -0.23
PABPC1-216ENST00000520868 GPHNQ9NQX3 736 aaPredicted RBP13.61□□□□□ -0.23
PABPC1-216ENST00000520868 SPRYD3Q8NCJ5 442 aa13.6□□□□□ -0.23
PABPC1-216ENST00000520868 NCKAP5LQ9HCH0 1330 aa13.59□□□□□ -0.23
PABPC1-216ENST00000520868 ZSWIM6Q9HCJ5 1215 aa13.58□□□□□ -0.24
PABPC1-216ENST00000520868 FOXK1P85037 733 aa13.57□□□□□ -0.24
PABPC1-216ENST00000520868 CADPS2Q86UW7 1296 aa13.57□□□□□ -0.24
PABPC1-216ENST00000520868 PLPP6Q8IY26 295 aa13.57□□□□□ -0.24
PABPC1-216ENST00000520868 CRISPLD2Q9H0B8 497 aa13.57□□□□□ -0.24
PABPC1-216ENST00000520868 ERBB3P21860 1342 aa13.55□□□□□ -0.24
PABPC1-216ENST00000520868 PCDHGA4Q9Y5G9 962 aa13.53□□□□□ -0.24
PABPC1-216ENST00000520868 SLC34A2O95436 690 aa13.52□□□□□ -0.25
PABPC1-216ENST00000520868 NUDT7P0C024 238 aa13.52□□□□□ -0.25
PABPC1-216ENST00000520868 VARS2Q5ST30 1063 aaKnown RBP13.52□□□□□ -0.25
PABPC1-216ENST00000520868 PAXIP1Q6ZW49 1069 aaPredicted RBP13.51□□□□□ -0.25
PABPC1-216ENST00000520868 CFAP44Q96MT7 982 aa13.5□□□□□ -0.25
PABPC1-216ENST00000520868 PDE4AP27815 886 aa13.49□□□□□ -0.25
PABPC1-216ENST00000520868 LARP6Q9BRS8 491 aaKnown RBP13.48□□□□□ -0.25
PABPC1-216ENST00000520868 PPP1R15BQ5SWA1 713 aa13.47□□□□□ -0.25
PABPC1-216ENST00000520868 KRTAP3-3Q9BYR6 98 aa13.47□□□□□ -0.25
PABPC1-216ENST00000520868 KRTAP3-2Q9BYR7 98 aa13.47□□□□□ -0.25
PABPC1-216ENST00000520868 PTCD2Q8WV60 388 aaKnown RBP13.44□□□□□ -0.26
PABPC1-216ENST00000520868 ZNF316A6NFI3 1004 aaPredicted RBP13.43□□□□□ -0.26
PABPC1-216ENST00000520868 UPF1Q92900 1129 aaKnown RBP eCLIP13.43□□□□□ -0.26
PABPC1-216ENST00000520868 LHX6Q9UPM6 363 aa13.42□□□□□ -0.26
PABPC1-216ENST00000520868 KDM4FA0A1W2PPD8 638 aa13.41□□□□□ -0.26
PABPC1-216ENST00000520868 MFSD10Q14728 455 aa13.4□□□□□ -0.26
PABPC1-216ENST00000520868 DDX27Q96GQ7 796 aaKnown RBP13.4□□□□□ -0.26
PABPC1-216ENST00000520868 OXER1Q8TDS5 423 aa13.38□□□□□ -0.27
PABPC1-216ENST00000520868 ZNF687Q8N1G0 1237 aa13.37□□□□□ -0.27
PABPC1-216ENST00000520868 SPNS2Q8IVW8 549 aa13.33□□□□□ -0.28
PABPC1-216ENST00000520868 EMILIN3Q9NT22 766 aa13.33□□□□□ -0.28
PABPC1-216ENST00000520868 TBC1D12O60347 775 aa13.31□□□□□ -0.28
PABPC1-216ENST00000520868 POTEEQ6S8J3 1075 aa13.31□□□□□ -0.28
PABPC1-216ENST00000520868 AXIN2Q9Y2T1 843 aa13.27□□□□□ -0.29
PABPC1-216ENST00000520868 PLCB2Q00722 1185 aa13.25□□□□□ -0.29
PABPC1-216ENST00000520868 MMRN1Q13201 1228 aa13.24□□□□□ -0.29
PABPC1-216ENST00000520868 EVI5O60447 810 aa13.22□□□□□ -0.29
PABPC1-216ENST00000520868 CAMK2BQ13554 666 aa13.21□□□□□ -0.29
PABPC1-216ENST00000520868 TSHZ2Q9NRE2 1034 aa13.21□□□□□ -0.29
PABPC1-216ENST00000520868 WDR70Q9NW82 654 aa13.21□□□□□ -0.29
PABPC1-216ENST00000520868 MAP3K9P80192 1104 aa13.2□□□□□ -0.3
PABPC1-216ENST00000520868 ANKRD13DQ6ZTN6 518 aa13.19□□□□□ -0.3
PABPC1-216ENST00000520868 PSDA5PKW4 1024 aaPredicted RBP13.17□□□□□ -0.3
PABPC1-216ENST00000520868 DPYSL4O14531 572 aa13.17□□□□□ -0.3
PABPC1-216ENST00000520868 ZNF454Q8N9F8 522 aa13.17□□□□□ -0.3
PABPC1-216ENST00000520868 PSEN2P49810 448 aa13.16□□□□□ -0.3
PABPC1-216ENST00000520868 LSM11P83369 360 aaKnown RBP eCLIP13.16□□□□□ -0.3
PABPC1-216ENST00000520868 PPP4R3BQ5MIZ7 849 aa13.16□□□□□ -0.3
PABPC1-216ENST00000520868 ANO8Q9HCE9 1232 aaPredicted RBP13.16□□□□□ -0.3
PABPC1-216ENST00000520868 DMRTA1Q5VZB9 504 aa13.14□□□□□ -0.31
PABPC1-216ENST00000520868 PBX2P40425 430 aa13.13□□□□□ -0.31
PABPC1-216ENST00000520868 FOSBP53539 338 aa13.13□□□□□ -0.31
PABPC1-216ENST00000520868 ABCC9O60706 1549 aa13.13□□□□□ -0.31
PABPC1-216ENST00000520868 ARHGAP33O14559 1287 aa13.12□□□□□ -0.31
PABPC1-216ENST00000520868 E2F4Q16254 413 aa13.11□□□□□ -0.31
PABPC1-216ENST00000520868 KCNK17Q96T54 332 aa13.09□□□□□ -0.31
PABPC1-216ENST00000520868 JPH4Q96JJ6 628 aa13.08□□□□□ -0.32
PABPC1-216ENST00000520868 ADAM33Q9BZ11 813 aa13.07□□□□□ -0.32
PABPC1-216ENST00000520868 PCDHGA10Q9Y5H3 936 aa13.06□□□□□ -0.32
PABPC1-216ENST00000520868 BCL2L12Q9HB09 334 aa13.05□□□□□ -0.32
PABPC1-216ENST00000520868 HAP1P54257 671 aaPredicted RBP13.04□□□□□ -0.32
PABPC1-216ENST00000520868 ADGRD1Q6QNK2 874 aa13.03□□□□□ -0.32
PABPC1-216ENST00000520868 ZDHHC16Q969W1 377 aa13.03□□□□□ -0.32
PABPC1-216ENST00000520868 MYT1LQ9UL68 1186 aa13.03□□□□□ -0.32
PABPC1-216ENST00000520868 ARIH1Q9Y4X5 557 aaPredicted RBP13.02□□□□□ -0.33
PABPC1-216ENST00000520868 DDX12PQ92771 950 aa13.01□□□□□ -0.33
PABPC1-216ENST00000520868 RNF166Q96A37 237 aaPredicted RBP13□□□□□ -0.33
PABPC1-216ENST00000520868 SPDYE16A6NNV3 312 aaPredicted RBP12.99□□□□□ -0.33
PABPC1-216ENST00000520868 PDIA6Q15084 440 aa12.99□□□□□ -0.33
PABPC1-216ENST00000520868 PHF14O94880 888 aa12.97□□□□□ -0.33
PABPC1-216ENST00000520868 PTPREP23469 700 aa12.97□□□□□ -0.33
PABPC1-216ENST00000520868 KCNH8Q96L42 1107 aa12.97□□□□□ -0.33
PABPC1-216ENST00000520868 HRO43593 1189 aa12.95□□□□□ -0.34
PABPC1-216ENST00000520868 TYW1BQ6NUM6 668 aa12.95□□□□□ -0.34
PABPC1-216ENST00000520868 P3H3Q8IVL6 736 aa12.95□□□□□ -0.34
PABPC1-216ENST00000520868 TK2O00142 265 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms