RNA–Protein interactions for RNA: ENST00000519445.5

KCNQ3-202, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNQ3, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-202ENST00000519445 MPHOSPH9Q99550 1183 aa32.58■■■□□ 2.81
KCNQ3-202ENST00000519445 NEFLP07196 543 aa32.56■■■□□ 2.8
KCNQ3-202ENST00000519445 DENND4BO75064 1496 aaPredicted RBP32.54■■■□□ 2.8
KCNQ3-202ENST00000519445 JPH4Q96JJ6 628 aa32.54■■■□□ 2.8
KCNQ3-202ENST00000519445 KIAA0556O60303 1618 aa32.54■■■□□ 2.8
KCNQ3-202ENST00000519445 TIMELESSQ9UNS1 1208 aa32.53■■■□□ 2.8
KCNQ3-202ENST00000519445 CFDP1Q9UEE9 299 aaPredicted RBP32.47■■■□□ 2.79
KCNQ3-202ENST00000519445 TCOF1Q13428 1488 aaKnown RBP32.47■■■□□ 2.79
KCNQ3-202ENST00000519445 L3MBTL2Q969R5 705 aa32.46■■■□□ 2.79
KCNQ3-202ENST00000519445 CEP170Q5SW79 1584 aa32.46■■■□□ 2.79
KCNQ3-202ENST00000519445 CDK11AQ9UQ88 783 aaPredicted RBP32.43■■■□□ 2.78
KCNQ3-202ENST00000519445 SALL2Q9Y467 1007 aaPredicted RBP32.43■■■□□ 2.78
KCNQ3-202ENST00000519445 ABCC5O15440 1437 aa32.41■■■□□ 2.78
KCNQ3-202ENST00000519445 HSPA5P11021 654 aaKnown RBP32.41■■■□□ 2.78
KCNQ3-202ENST00000519445 SLC4A1APQ9BWU0 796 aaKnown RBP32.41■■■□□ 2.78
KCNQ3-202ENST00000519445 ANP32CO43423 234 aa32.41■■■□□ 2.78
KCNQ3-202ENST00000519445 CCDC136Q96JN2 1154 aa32.41■■■□□ 2.78
KCNQ3-202ENST00000519445 DAPK1P53355 1430 aa32.4■■■□□ 2.78
KCNQ3-202ENST00000519445 CNGB1Q14028 1251 aaPredicted RBP32.4■■■□□ 2.78
KCNQ3-202ENST00000519445 MIA2Q96PC5 1412 aa32.38■■■□□ 2.77
KCNQ3-202ENST00000519445 RAPGEF6Q8TEU7 1601 aa32.38■■■□□ 2.77
KCNQ3-202ENST00000519445 KDM5BQ9UGL1 1544 aa32.37■■■□□ 2.77
KCNQ3-202ENST00000519445 SYNJ2O15056 1496 aa32.35■■■□□ 2.77
KCNQ3-202ENST00000519445 ZNF326Q5BKZ1 582 aaKnown RBP32.33■■■□□ 2.77
KCNQ3-202ENST00000519445 FANCIQ9NVI1 1328 aa32.32■■■□□ 2.77
KCNQ3-202ENST00000519445 NBPF8Q3BBV2 869 aa32.31■■■□□ 2.76
KCNQ3-202ENST00000519445 MAGI1Q96QZ7 1491 aaPredicted RBP32.3■■■□□ 2.76
KCNQ3-202ENST00000519445 C11orf95C9JLR9 678 aaPredicted RBP32.29■■■□□ 2.76
KCNQ3-202ENST00000519445 KIF14Q15058 1648 aa32.29■■■□□ 2.76
KCNQ3-202ENST00000519445 WASHC2AQ641Q2 1341 aa32.29■■■□□ 2.76
KCNQ3-202ENST00000519445 GCC2Q8IWJ2 1684 aa32.26■■■□□ 2.75
KCNQ3-202ENST00000519445 TROQ12816 1431 aaPredicted RBP32.25■■■□□ 2.75
KCNQ3-202ENST00000519445 NBR1Q14596 966 aa32.25■■■□□ 2.75
KCNQ3-202ENST00000519445 PLEKHD1A6NEE1 506 aa32.23■■■□□ 2.75
KCNQ3-202ENST00000519445 IRX6P78412 446 aaPredicted RBP32.21■■■□□ 2.75
KCNQ3-202ENST00000519445 CAMSAP2Q08AD1 1489 aa32.21■■■□□ 2.75
KCNQ3-202ENST00000519445 GPATCH8Q9UKJ3 1502 aaKnown RBP32.2■■■□□ 2.75
KCNQ3-202ENST00000519445 CARMIL2Q6F5E8 1435 aa32.2■■■□□ 2.75
KCNQ3-202ENST00000519445 POLR3GLQ9BT43 218 aa32.2■■■□□ 2.74
KCNQ3-202ENST00000519445 HNRNPMP52272 730 aaKnown RBP eCLIP32.19■■■□□ 2.74
KCNQ3-202ENST00000519445 EIF4G2P78344 907 aaKnown RBP eCLIP32.19■■■□□ 2.74
KCNQ3-202ENST00000519445 ANKRD30BQ9BXX2 1392 aa32.17■■■□□ 2.74
KCNQ3-202ENST00000519445 CCDC184Q52MB2 194 aa32.15■■■□□ 2.74
KCNQ3-202ENST00000519445 MYT1LQ9UL68 1186 aa32.15■■■□□ 2.74
KCNQ3-202ENST00000519445 NUP160Q12769 1436 aa32.14■■■□□ 2.74
KCNQ3-202ENST00000519445 DNMT1P26358 1616 aaKnown RBP32.14■■■□□ 2.74
KCNQ3-202ENST00000519445 PKD2Q13563 968 aa32.14■■■□□ 2.74
KCNQ3-202ENST00000519445 AKNAQ7Z591 1439 aa32.13■■■□□ 2.73
KCNQ3-202ENST00000519445 RTN4Q9NQC3 1192 aaKnown RBP32.11■■■□□ 2.73
KCNQ3-202ENST00000519445 NCOA1Q15788 1441 aa32.1■■■□□ 2.73
KCNQ3-202ENST00000519445 ROCK1Q13464 1354 aa32.1■■■□□ 2.73
KCNQ3-202ENST00000519445 ZBTB4Q9P1Z0 1013 aaPredicted RBP32.09■■■□□ 2.73
KCNQ3-202ENST00000519445 ATP10BO94823 1461 aa32.09■■■□□ 2.73
KCNQ3-202ENST00000519445 SENP3-EIF4A1A0A087X0R7 540 aa32.07■■■□□ 2.72
KCNQ3-202ENST00000519445 CCER2I3L3R5 266 aa32.05■■■□□ 2.72
KCNQ3-202ENST00000519445 HNRNPUQ00839 825 aaKnown RBP eCLIP32.03■■■□□ 2.72
KCNQ3-202ENST00000519445 KDM2AQ9Y2K7 1162 aa32.03■■■□□ 2.72
KCNQ3-202ENST00000519445 PZPP20742 1482 aa32.02■■■□□ 2.72
KCNQ3-202ENST00000519445 PTPRGP23470 1445 aa32.01■■■□□ 2.71
KCNQ3-202ENST00000519445 RPRD2Q5VT52 1461 aaKnown RBP31.99■■■□□ 2.71
KCNQ3-202ENST00000519445 IL27Q8NEV9 243 aa31.99■■■□□ 2.71
KCNQ3-202ENST00000519445 NUP155O75694 1391 aa31.97■■■□□ 2.71
KCNQ3-202ENST00000519445 TSPY4P0CV99 314 aa31.96■■■□□ 2.71
KCNQ3-202ENST00000519445 TSPY10P0CW01 314 aa31.96■■■□□ 2.71
KCNQ3-202ENST00000519445 ANKRD30AQ9BXX3 1397 aa31.94■■■□□ 2.7
KCNQ3-202ENST00000519445 ANKRD50Q9ULJ7 1429 aa31.94■■■□□ 2.7
KCNQ3-202ENST00000519445 FAM9BQ8IZU0 186 aa31.94■■■□□ 2.7
KCNQ3-202ENST00000519445 TEX14Q8IWB6 1497 aa31.94■■■□□ 2.7
KCNQ3-202ENST00000519445 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.92■■■□□ 2.7
KCNQ3-202ENST00000519445 KIF7Q2M1P5 1343 aa31.9■■■□□ 2.7
KCNQ3-202ENST00000519445 ABCA8O94911 1581 aa31.9■■■□□ 2.7
KCNQ3-202ENST00000519445 PAK3O75914 559 aaPredicted RBP31.89■■■□□ 2.7
KCNQ3-202ENST00000519445 CCDC7Q96M83 1385 aa31.89■■■□□ 2.7
KCNQ3-202ENST00000519445 C9orf84Q5VXU9 1444 aa31.88■■■□□ 2.69
KCNQ3-202ENST00000519445 ABCC10Q5T3U5 1492 aa31.86■■■□□ 2.69
KCNQ3-202ENST00000519445 CDC42BPAQ5VT25 1732 aa31.85■■■□□ 2.69
KCNQ3-202ENST00000519445 ERCC6L2Q5T890 1561 aa31.85■■■□□ 2.69
KCNQ3-202ENST00000519445 ITSN2Q9NZM3 1697 aa31.84■■■□□ 2.69
KCNQ3-202ENST00000519445 ERICH6BQ5W0A0 696 aa31.83■■■□□ 2.69
KCNQ3-202ENST00000519445 NOP58Q9Y2X3 529 aaKnown RBP31.82■■■□□ 2.68
KCNQ3-202ENST00000519445 KIAA1107Q9UPP5 1409 aa31.82■■■□□ 2.68
KCNQ3-202ENST00000519445 KIF15Q9NS87 1388 aa31.81■■■□□ 2.68
KCNQ3-202ENST00000519445 RGL3Q3MIN7 710 aa31.81■■■□□ 2.68
KCNQ3-202ENST00000519445 PRKRIP1Q9H875 184 aaPredicted RBP31.8■■■□□ 2.68
KCNQ3-202ENST00000519445 CNTLNQ9NXG0 1405 aa31.79■■■□□ 2.68
KCNQ3-202ENST00000519445 MRS2Q9HD23 443 aa31.79■■■□□ 2.68
KCNQ3-202ENST00000519445 DCAF11Q8TEB1 546 aa31.78■■■□□ 2.68
KCNQ3-202ENST00000519445 ADCY10Q96PN6 1610 aa31.76■■■□□ 2.67
KCNQ3-202ENST00000519445 UBE2Q2Q8WVN8 375 aa31.76■■■□□ 2.67
KCNQ3-202ENST00000519445 CHD1O14646 1710 aa31.74■■■□□ 2.67
KCNQ3-202ENST00000519445 ADGRL2O95490 1459 aa31.73■■■□□ 2.67
KCNQ3-202ENST00000519445 USP47Q96K76 1375 aa31.72■■■□□ 2.67
KCNQ3-202ENST00000519445 ADGBQ8N7X0 1667 aa31.71■■■□□ 2.67
KCNQ3-202ENST00000519445 SPATA31E1Q6ZUB1 1445 aa31.71■■■□□ 2.67
KCNQ3-202ENST00000519445 CARD11Q9BXL7 1154 aa31.7■■■□□ 2.66
KCNQ3-202ENST00000519445 CROCC2H7BZ55 1655 aa31.7■■■□□ 2.66
KCNQ3-202ENST00000519445 MBD5Q9P267 1494 aa31.67■■■□□ 2.66
KCNQ3-202ENST00000519445 RTL5Q5HYW3 569 aaPredicted RBP31.66■■■□□ 2.66
KCNQ3-202ENST00000519445 ST20-MTHFSA0A0A6YYL1 179 aa31.63■■■□□ 2.65
KCNQ3-202ENST00000519445 B4GALNT3Q6L9W6 998 aa31.63■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms