RNA–Protein interactions for RNA: ENST00000518293.5

PABPC1-206, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-206ENST00000518293 HOXB1P14653 301 aaPredicted RBP10.33□□□□□ -0.76
PABPC1-206ENST00000518293 TMEM92Q6UXU6 159 aa10.33□□□□□ -0.76
PABPC1-206ENST00000518293 FBXO22Q8NEZ5 403 aa10.32□□□□□ -0.76
PABPC1-206ENST00000518293 SPNS2Q8IVW8 549 aa10.3□□□□□ -0.76
PABPC1-206ENST00000518293 MFRPQ9BY79 579 aa10.3□□□□□ -0.76
PABPC1-206ENST00000518293 POTEB3A0JP26 581 aa10.29□□□□□ -0.76
PABPC1-206ENST00000518293 POTEBQ6S5H4 581 aa10.29□□□□□ -0.76
PABPC1-206ENST00000518293 ERBB3P21860 1342 aa10.28□□□□□ -0.76
PABPC1-206ENST00000518293 ZSWIM6Q9HCJ5 1215 aa10.27□□□□□ -0.77
PABPC1-206ENST00000518293 MMRN1Q13201 1228 aa10.26□□□□□ -0.77
PABPC1-206ENST00000518293 DCAF8L2P0C7V8 631 aa10.24□□□□□ -0.77
PABPC1-206ENST00000518293 KRTAP3-3Q9BYR6 98 aa10.24□□□□□ -0.77
PABPC1-206ENST00000518293 KRTAP3-2Q9BYR7 98 aa10.24□□□□□ -0.77
PABPC1-206ENST00000518293 VARS2Q5ST30 1063 aaKnown RBP10.2□□□□□ -0.78
PABPC1-206ENST00000518293 GPR153Q6NV75 609 aa10.2□□□□□ -0.78
PABPC1-206ENST00000518293 CHGAP10645 457 aaKnown RBP10.17□□□□□ -0.78
PABPC1-206ENST00000518293 C2orf72A6NCS6 295 aa10.16□□□□□ -0.78
PABPC1-206ENST00000518293 ARSIQ5FYB1 569 aa10.16□□□□□ -0.78
PABPC1-206ENST00000518293 KIF3CO14782 793 aa10.15□□□□□ -0.78
PABPC1-206ENST00000518293 HS6ST3Q8IZP7 471 aa10.14□□□□□ -0.79
PABPC1-206ENST00000518293 TMC2Q8TDI7 906 aa10.14□□□□□ -0.79
PABPC1-206ENST00000518293 ZNF687Q8N1G0 1237 aa10.12□□□□□ -0.79
PABPC1-206ENST00000518293 PPP1R37O75864 691 aa10.11□□□□□ -0.79
PABPC1-206ENST00000518293 KHSRPQ92945 711 aaKnown RBP eCLIP10.11□□□□□ -0.793e-10■■■□□ 15.1
PABPC1-206ENST00000518293 ZNF316A6NFI3 1004 aaPredicted RBP10.09□□□□□ -0.79
PABPC1-206ENST00000518293 DNAJC5Q9H3Z4 198 aa10.07□□□□□ -0.8
PABPC1-206ENST00000518293 SLC34A2O95436 690 aa10.06□□□□□ -0.8
PABPC1-206ENST00000518293 NUDT7P0C024 238 aa10.05□□□□□ -0.8
PABPC1-206ENST00000518293 NKX1-1Q15270 411 aaPredicted RBP10.04□□□□□ -0.8
PABPC1-206ENST00000518293 BBXQ8WY36 941 aaPredicted RBP10.04□□□□□ -0.8
PABPC1-206ENST00000518293 PCDHGA4Q9Y5G9 962 aa10.04□□□□□ -0.8
PABPC1-206ENST00000518293 RNF166Q96A37 237 aaPredicted RBP10.01□□□□□ -0.81
PABPC1-206ENST00000518293 MYT1LQ9UL68 1186 aa10□□□□□ -0.81
PABPC1-206ENST00000518293 LHX6Q9UPM6 363 aa10□□□□□ -0.81
PABPC1-206ENST00000518293 ANKRD13DQ6ZTN6 518 aa9.99□□□□□ -0.81
PABPC1-206ENST00000518293 RYDENQ9NUL5 291 aaKnown RBP9.99□□□□□ -0.81
PABPC1-206ENST00000518293 PTGER2P43116 358 aa9.98□□□□□ -0.81
PABPC1-206ENST00000518293 FOXK1P85037 733 aa9.98□□□□□ -0.81
PABPC1-206ENST00000518293 GPHNQ9NQX3 736 aaPredicted RBP9.98□□□□□ -0.81
PABPC1-206ENST00000518293 PLPP6Q8IY26 295 aa9.97□□□□□ -0.81
PABPC1-206ENST00000518293 PBX2P40425 430 aa9.96□□□□□ -0.82
PABPC1-206ENST00000518293 LSM11P83369 360 aaKnown RBP eCLIP9.95□□□□□ -0.82
PABPC1-206ENST00000518293 PTCD2Q8WV60 388 aaKnown RBP9.95□□□□□ -0.82
PABPC1-206ENST00000518293 GTPBP6O43824 516 aaPredicted RBP9.94□□□□□ -0.82
PABPC1-206ENST00000518293 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.94□□□□□ -0.82
PABPC1-206ENST00000518293 PSDA5PKW4 1024 aaPredicted RBP9.93□□□□□ -0.82
PABPC1-206ENST00000518293 DSG2Q14126 1118 aa9.93□□□□□ -0.82
PABPC1-206ENST00000518293 TBC1D12O60347 775 aa9.92□□□□□ -0.82
PABPC1-206ENST00000518293 AXIN2Q9Y2T1 843 aa9.91□□□□□ -0.82
PABPC1-206ENST00000518293 PAXIP1Q6ZW49 1069 aaPredicted RBP9.9□□□□□ -0.82
PABPC1-206ENST00000518293 SPRYD3Q8NCJ5 442 aa9.9□□□□□ -0.82
PABPC1-206ENST00000518293 POTEEQ6S8J3 1075 aa9.88□□□□□ -0.83
PABPC1-206ENST00000518293 CFAP44Q96MT7 982 aa9.88□□□□□ -0.83
PABPC1-206ENST00000518293 KDM4FA0A1W2PPD8 638 aa9.87□□□□□ -0.83
PABPC1-206ENST00000518293 ARHGAP33O14559 1287 aa9.86□□□□□ -0.83
PABPC1-206ENST00000518293 PLCB2Q00722 1185 aa9.85□□□□□ -0.83
PABPC1-206ENST00000518293 PPP4R3BQ5MIZ7 849 aa9.85□□□□□ -0.83
PABPC1-206ENST00000518293 CRISPLD2Q9H0B8 497 aa9.85□□□□□ -0.83
PABPC1-206ENST00000518293 PPP1R15BQ5SWA1 713 aa9.83□□□□□ -0.84
PABPC1-206ENST00000518293 UPF1Q92900 1129 aaKnown RBP eCLIP9.83□□□□□ -0.84
PABPC1-206ENST00000518293 PDE4AP27815 886 aa9.82□□□□□ -0.84
PABPC1-206ENST00000518293 ADGRD1Q6QNK2 874 aa9.81□□□□□ -0.84
PABPC1-206ENST00000518293 OXER1Q8TDS5 423 aa9.81□□□□□ -0.84
PABPC1-206ENST00000518293 KCNH8Q96L42 1107 aa9.8□□□□□ -0.84
PABPC1-206ENST00000518293 NCKAP5LQ9HCH0 1330 aa9.79□□□□□ -0.84
PABPC1-206ENST00000518293 PSEN2P49810 448 aa9.78□□□□□ -0.84
PABPC1-206ENST00000518293 TK2O00142 265 aa9.77□□□□□ -0.85
PABPC1-206ENST00000518293 DMRTA1Q5VZB9 504 aa9.77□□□□□ -0.85
PABPC1-206ENST00000518293 LARP6Q9BRS8 491 aaKnown RBP9.76□□□□□ -0.85
PABPC1-206ENST00000518293 DDX27Q96GQ7 796 aaKnown RBP9.75□□□□□ -0.85
PABPC1-206ENST00000518293 KCNK17Q96T54 332 aa9.75□□□□□ -0.85
PABPC1-206ENST00000518293 ZNF454Q8N9F8 522 aa9.74□□□□□ -0.85
PABPC1-206ENST00000518293 STAC3Q96MF2 364 aa9.74□□□□□ -0.85
PABPC1-206ENST00000518293 TSHZ2Q9NRE2 1034 aa9.74□□□□□ -0.85
PABPC1-206ENST00000518293 HRO43593 1189 aa9.72□□□□□ -0.85
PABPC1-206ENST00000518293 HCSTQ9UBK5 93 aa9.72□□□□□ -0.85
PABPC1-206ENST00000518293 EVI5O60447 810 aa9.7□□□□□ -0.86
PABPC1-206ENST00000518293 HAP1P54257 671 aaPredicted RBP9.7□□□□□ -0.86
PABPC1-206ENST00000518293 CADPS2Q86UW7 1296 aa9.7□□□□□ -0.86
PABPC1-206ENST00000518293 MAP3K9P80192 1104 aa9.69□□□□□ -0.86
PABPC1-206ENST00000518293 MFSD10Q14728 455 aa9.69□□□□□ -0.86
PABPC1-206ENST00000518293 BCL2L12Q9HB09 334 aa9.69□□□□□ -0.86
PABPC1-206ENST00000518293 FOSBP53539 338 aa9.68□□□□□ -0.86
PABPC1-206ENST00000518293 ANO8Q9HCE9 1232 aaPredicted RBP9.68□□□□□ -0.86
PABPC1-206ENST00000518293 PTPREP23469 700 aa9.67□□□□□ -0.86
PABPC1-206ENST00000518293 JPH4Q96JJ6 628 aa9.67□□□□□ -0.86
PABPC1-206ENST00000518293 VPS9D1Q9Y2B5 631 aa9.66□□□□□ -0.86
PABPC1-206ENST00000518293 KCTD12Q96CX2 325 aaKnown RBP9.65□□□□□ -0.86
PABPC1-206ENST00000518293 ZDHHC16Q969W1 377 aa9.64□□□□□ -0.87
PABPC1-206ENST00000518293 PLA2G2EQ9NZK7 142 aa9.64□□□□□ -0.87
PABPC1-206ENST00000518293 SLC4A5Q9BY07 1137 aa9.63□□□□□ -0.87
PABPC1-206ENST00000518293 EMILIN3Q9NT22 766 aa9.63□□□□□ -0.87
PABPC1-206ENST00000518293 ADAM33Q9BZ11 813 aa9.6□□□□□ -0.87
PABPC1-206ENST00000518293 ZBED2Q9BTP6 218 aa9.59□□□□□ -0.87
PABPC1-206ENST00000518293 KDM2AQ9Y2K7 1162 aa9.59□□□□□ -0.87
PABPC1-206ENST00000518293 GOLGA8CPA6NN73 597 aa9.58□□□□□ -0.88
PABPC1-206ENST00000518293 SLC24A1O60721 1099 aa9.58□□□□□ -0.88
PABPC1-206ENST00000518293 BHMG1C9JSJ3 638 aaPredicted RBP9.56□□□□□ -0.88
PABPC1-206ENST00000518293 PTPN5P54829 565 aa9.56□□□□□ -0.88
PABPC1-206ENST00000518293 VSIG10Q8N0Z9 540 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms