RNA–Protein interactions for RNA: ENST00000518236.1

FAM3B-206, Transcript of family with sequence similarity 3 member B, humanhuman

TSL 2

Gene FAM3B, Length 1,052 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3B-206ENST00000518236 CCDC18Q5T9S5 1454 aa17.44■□□□□ 0.38
FAM3B-206ENST00000518236 FYCO1Q9BQS8 1478 aa17.44■□□□□ 0.38
FAM3B-206ENST00000518236 EFCAB2Q5VUJ9 269 aa17.44■□□□□ 0.38
FAM3B-206ENST00000518236 HECW2Q9P2P5 1572 aa17.44■□□□□ 0.38
FAM3B-206ENST00000518236 SCAPERQ9BY12 1400 aa17.43■□□□□ 0.38
FAM3B-206ENST00000518236 RICTORQ6R327 1708 aa17.42■□□□□ 0.38
FAM3B-206ENST00000518236 CFAP74Q9C0B2 1584 aa17.42■□□□□ 0.38
FAM3B-206ENST00000518236 ADAMTSL3P82987 1691 aa17.4■□□□□ 0.38
FAM3B-206ENST00000518236 LOC105371045A0A1W2PR82 267 aa17.4■□□□□ 0.38
FAM3B-206ENST00000518236 CEP162Q5TB80 1403 aa17.39■□□□□ 0.38
FAM3B-206ENST00000518236 POGZQ7Z3K3 1410 aa17.39■□□□□ 0.38
FAM3B-206ENST00000518236 ZMYM4Q5VZL5 1548 aa17.39■□□□□ 0.37
FAM3B-206ENST00000518236 YEATS2Q9ULM3 1422 aa17.38■□□□□ 0.37
FAM3B-206ENST00000518236 SIGLEC1Q9BZZ2 1709 aa17.37■□□□□ 0.37
FAM3B-206ENST00000518236 ARHGEF40Q8TER5 1519 aa17.37■□□□□ 0.37
FAM3B-206ENST00000518236 MYO5CQ9NQX4 1742 aa17.36■□□□□ 0.37
FAM3B-206ENST00000518236 MAGI2Q86UL8 1455 aa17.36■□□□□ 0.37
FAM3B-206ENST00000518236 ARHGAP5Q13017 1502 aa17.36■□□□□ 0.37
FAM3B-206ENST00000518236 BCORL1Q5H9F3 1711 aa17.35■□□□□ 0.37
FAM3B-206ENST00000518236 ARID4BQ4LE39 1312 aaPredicted RBP17.34■□□□□ 0.37
FAM3B-206ENST00000518236 AFAP1Q8N556 730 aa17.34■□□□□ 0.37
FAM3B-206ENST00000518236 ZFYVE16Q7Z3T8 1539 aa17.33■□□□□ 0.37
FAM3B-206ENST00000518236 ARHGEF12Q9NZN5 1544 aa17.32■□□□□ 0.36
FAM3B-206ENST00000518236 CDC42BPBQ9Y5S2 1711 aa17.31■□□□□ 0.36
FAM3B-206ENST00000518236 MADDQ8WXG6 1647 aa17.31■□□□□ 0.36
FAM3B-206ENST00000518236 GPATCH8Q9UKJ3 1502 aaKnown RBP17.3■□□□□ 0.36
FAM3B-206ENST00000518236 PTPRMP28827 1452 aa17.3■□□□□ 0.36
FAM3B-206ENST00000518236 PREX2Q70Z35 1606 aa17.29■□□□□ 0.36
FAM3B-206ENST00000518236 ZNF518AQ6AHZ1 1483 aa17.29■□□□□ 0.36
FAM3B-206ENST00000518236 TRAPPC8Q9Y2L5 1435 aa17.29■□□□□ 0.36
FAM3B-206ENST00000518236 KDM5CP41229 1560 aa17.28■□□□□ 0.36
FAM3B-206ENST00000518236 ATP10AO60312 1499 aa17.27■□□□□ 0.36
FAM3B-206ENST00000518236 MTUS2Q5JR59 1369 aa17.27■□□□□ 0.35
FAM3B-206ENST00000518236 ABCC1P33527 1531 aa17.26■□□□□ 0.35
FAM3B-206ENST00000518236 MLH3Q9UHC1 1453 aa17.24■□□□□ 0.35
FAM3B-206ENST00000518236 CDC42BPAQ5VT25 1732 aa17.24■□□□□ 0.35
FAM3B-206ENST00000518236 C9orf84Q5VXU9 1444 aa17.24■□□□□ 0.35
FAM3B-206ENST00000518236 RIMS1Q86UR5 1692 aaKnown RBP17.24■□□□□ 0.35
FAM3B-206ENST00000518236 ZNF777Q9ULD5 760 aaPredicted RBP17.24■□□□□ 0.35
FAM3B-206ENST00000518236 CFDP1Q9UEE9 299 aaPredicted RBP17.23■□□□□ 0.35
FAM3B-206ENST00000518236 CCNB3Q8WWL7 1395 aa17.23■□□□□ 0.35
FAM3B-206ENST00000518236 MLECQ14165 292 aa17.22■□□□□ 0.35
FAM3B-206ENST00000518236 SAMD9LQ8IVG5 1584 aa17.22■□□□□ 0.35
FAM3B-206ENST00000518236 HNRNPMP52272 730 aaKnown RBP eCLIP17.21■□□□□ 0.35
FAM3B-206ENST00000518236 VPS8Q8N3P4 1428 aa17.21■□□□□ 0.34
FAM3B-206ENST00000518236 KIAA1107Q9UPP5 1409 aa17.2■□□□□ 0.34
FAM3B-206ENST00000518236 DIP2CQ9Y2E4 1556 aa17.19■□□□□ 0.34
FAM3B-206ENST00000518236 MYT1LQ9UL68 1186 aa17.19■□□□□ 0.34
FAM3B-206ENST00000518236 EHBP1L1Q8N3D4 1523 aa17.19■□□□□ 0.34
FAM3B-206ENST00000518236 ITSN2Q9NZM3 1697 aa17.19■□□□□ 0.34
FAM3B-206ENST00000518236 ZNF644Q9H582 1327 aaPredicted RBP17.19■□□□□ 0.34
FAM3B-206ENST00000518236 ILDR1Q86SU0 546 aaPredicted RBP17.18■□□□□ 0.34
FAM3B-206ENST00000518236 SYCP2Q9BX26 1530 aa17.17■□□□□ 0.34
FAM3B-206ENST00000518236 TIAM1Q13009 1591 aa17.16■□□□□ 0.34
FAM3B-206ENST00000518236 ABCA6Q8N139 1617 aa17.16■□□□□ 0.34
FAM3B-206ENST00000518236 LMTK3Q96Q04 1460 aa17.16■□□□□ 0.34
FAM3B-206ENST00000518236 REREQ9P2R6 1566 aa17.15■□□□□ 0.34
FAM3B-206ENST00000518236 FER1L4A9Z1Z3 1794 aa17.15■□□□□ 0.34
FAM3B-206ENST00000518236 PLEKHH2Q8IVE3 1493 aa17.14■□□□□ 0.33
FAM3B-206ENST00000518236 KIDINS220Q9ULH0 1771 aa17.14■□□□□ 0.33
FAM3B-206ENST00000518236 SPAG9O60271 1321 aaKnown RBP17.14■□□□□ 0.33
FAM3B-206ENST00000518236 NCOA2Q15596 1464 aa17.13■□□□□ 0.33
FAM3B-206ENST00000518236 MBD5Q9P267 1494 aa17.13■□□□□ 0.33
FAM3B-206ENST00000518236 KANK4Q5T7N3 995 aaPredicted RBP17.13■□□□□ 0.33
FAM3B-206ENST00000518236 AGLP35573 1532 aa17.12■□□□□ 0.33
FAM3B-206ENST00000518236 LRRC9Q6ZRR7 1453 aa17.11■□□□□ 0.33
FAM3B-206ENST00000518236 CEBPAP49715 358 aaPredicted RBP17.1■□□□□ 0.33
FAM3B-206ENST00000518236 MAP3K1Q13233 1512 aa17.08■□□□□ 0.32
FAM3B-206ENST00000518236 ATP7AQ04656 1500 aa17.06■□□□□ 0.32
FAM3B-206ENST00000518236 SUPT6HQ7KZ85 1726 aaKnown RBP17.06■□□□□ 0.32
FAM3B-206ENST00000518236 INO80Q9ULG1 1556 aaPredicted RBP17.06■□□□□ 0.32
FAM3B-206ENST00000518236 HSPA2P54652 639 aa17.04■□□□□ 0.32
FAM3B-206ENST00000518236 A2MP01023 1474 aa17.03■□□□□ 0.32
FAM3B-206ENST00000518236 CAMSAP2Q08AD1 1489 aa17.03■□□□□ 0.32
FAM3B-206ENST00000518236 RTEL1-TNFRSF6BF6WH68 1400 aa17.03■□□□□ 0.32
FAM3B-206ENST00000518236 PLXNC1O60486 1568 aa17.02■□□□□ 0.31
FAM3B-206ENST00000518236 RSPH4AQ5TD94 716 aa17.01■□□□□ 0.31
FAM3B-206ENST00000518236 PREX1Q8TCU6 1659 aa17■□□□□ 0.31
FAM3B-206ENST00000518236 CCDC141Q6ZP82 1450 aa16.99■□□□□ 0.31
FAM3B-206ENST00000518236 DHX29Q7Z478 1369 aaKnown RBP16.98■□□□□ 0.31
FAM3B-206ENST00000518236 C3P01024 1663 aa16.97■□□□□ 0.31
FAM3B-206ENST00000518236 CNTLNQ9NXG0 1405 aa16.97■□□□□ 0.31
FAM3B-206ENST00000518236 ESF1Q9H501 851 aaKnown RBP16.97■□□□□ 0.31
FAM3B-206ENST00000518236 MYOM3Q5VTT5 1437 aa16.96■□□□□ 0.31
FAM3B-206ENST00000518236 MIA2Q96PC5 1412 aa16.96■□□□□ 0.31
FAM3B-206ENST00000518236 GGT6Q6P531 493 aa16.96■□□□□ 0.31
FAM3B-206ENST00000518236 ZMYM3Q14202 1370 aa16.96■□□□□ 0.31
FAM3B-206ENST00000518236 ARHGEF5Q12774 1597 aa16.95■□□□□ 0.3
FAM3B-206ENST00000518236 STRCQ7RTU9 1775 aa16.93■□□□□ 0.3
FAM3B-206ENST00000518236 TSPY4P0CV99 314 aa16.93■□□□□ 0.3
FAM3B-206ENST00000518236 TSPY10P0CW01 314 aa16.93■□□□□ 0.3
FAM3B-206ENST00000518236 APLP2Q06481 763 aa16.93■□□□□ 0.3
FAM3B-206ENST00000518236 ADGBQ8N7X0 1667 aa16.92■□□□□ 0.3
FAM3B-206ENST00000518236 UHRF1BP1Q6BDS2 1440 aa16.91■□□□□ 0.3
FAM3B-206ENST00000518236 KIF3BO15066 747 aa16.91■□□□□ 0.3
FAM3B-206ENST00000518236 SETD1BQ9UPS6 1966 aaKnown RBP16.9■□□□□ 0.3
FAM3B-206ENST00000518236 DMRT2Q9Y5R5 561 aa16.89■□□□□ 0.29
FAM3B-206ENST00000518236 NPATQ14207 1427 aa16.88■□□□□ 0.29
FAM3B-206ENST00000518236 FBXO41Q8TF61 875 aa16.88■□□□□ 0.29
FAM3B-206ENST00000518236 MROH2AA6NES4 1674 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms