RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 EHBP1L1Q8N3D4 1523 aa20.23■□□□□ 0.83
PABPC1-205ENST00000518196 GLI2P10070 1586 aa20.22■□□□□ 0.83
PABPC1-205ENST00000518196 POTEDQ86YR6 584 aa20.22■□□□□ 0.83
PABPC1-205ENST00000518196 LRRC9Q6ZRR7 1453 aa20.22■□□□□ 0.83
PABPC1-205ENST00000518196 KIF13AQ9H1H9 1805 aa20.22■□□□□ 0.83
PABPC1-205ENST00000518196 KIF14Q15058 1648 aa20.21■□□□□ 0.83
PABPC1-205ENST00000518196 KANK4Q5T7N3 995 aaPredicted RBP20.2■□□□□ 0.82
PABPC1-205ENST00000518196 ABCA9Q8IUA7 1624 aa20.16■□□□□ 0.82
PABPC1-205ENST00000518196 SUPT6HQ7KZ85 1726 aaKnown RBP20.16■□□□□ 0.82
PABPC1-205ENST00000518196 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.16■□□□□ 0.827e-8■□□□□ 10.3
PABPC1-205ENST00000518196 CD109Q6YHK3 1445 aa20.14■□□□□ 0.81
PABPC1-205ENST00000518196 MAP3K4Q9Y6R4 1608 aa20.13■□□□□ 0.81
PABPC1-205ENST00000518196 TSPOAP1O95153 1857 aa20.11■□□□□ 0.81
PABPC1-205ENST00000518196 U3KPZ7 1027 aaPredicted RBP20.11■□□□□ 0.81
PABPC1-205ENST00000518196 TTC37Q6PGP7 1564 aa20.11■□□□□ 0.81
PABPC1-205ENST00000518196 NCOA2Q15596 1464 aa20.1■□□□□ 0.81
PABPC1-205ENST00000518196 CCNB3Q8WWL7 1395 aa20.09■□□□□ 0.81
PABPC1-205ENST00000518196 PPARGC1BQ86YN6 1023 aaKnown RBP20.09■□□□□ 0.81
PABPC1-205ENST00000518196 MYO5CQ9NQX4 1742 aa20.09■□□□□ 0.81
PABPC1-205ENST00000518196 PLCH2O75038 1416 aa20.07■□□□□ 0.8
PABPC1-205ENST00000518196 TEX14Q8IWB6 1497 aa20.05■□□□□ 0.8
PABPC1-205ENST00000518196 CDC42BPAQ5VT25 1732 aa20.05■□□□□ 0.8
PABPC1-205ENST00000518196 ARAP3Q8WWN8 1544 aa20.03■□□□□ 0.8
PABPC1-205ENST00000518196 GPATCH8Q9UKJ3 1502 aaKnown RBP20.03■□□□□ 0.8
PABPC1-205ENST00000518196 EFCAB2Q5VUJ9 269 aa20.03■□□□□ 0.8
PABPC1-205ENST00000518196 PPRC1Q5VV67 1664 aaKnown RBP20.03■□□□□ 0.8
PABPC1-205ENST00000518196 ITSN2Q9NZM3 1697 aa20.03■□□□□ 0.8
PABPC1-205ENST00000518196 PREX2Q70Z35 1606 aa20.02■□□□□ 0.8
PABPC1-205ENST00000518196 CDC42BPBQ9Y5S2 1711 aa20.02■□□□□ 0.79
PABPC1-205ENST00000518196 ARHGAP5Q13017 1502 aa20.02■□□□□ 0.79
PABPC1-205ENST00000518196 CFDP1Q9UEE9 299 aaPredicted RBP20.01■□□□□ 0.79
PABPC1-205ENST00000518196 CFAP74Q9C0B2 1584 aa20■□□□□ 0.79
PABPC1-205ENST00000518196 FANCAO15360 1455 aa19.99■□□□□ 0.79
PABPC1-205ENST00000518196 PHLDB1Q86UU1 1377 aa19.98■□□□□ 0.79
PABPC1-205ENST00000518196 ATXN8OSP0DMR3 200 aa19.98■□□□□ 0.79
PABPC1-205ENST00000518196 MYOM3Q5VTT5 1437 aa19.98■□□□□ 0.79
PABPC1-205ENST00000518196 NEO1Q92859 1461 aa19.98■□□□□ 0.79
PABPC1-205ENST00000518196 ZNF777Q9ULD5 760 aaPredicted RBP19.97■□□□□ 0.79
PABPC1-205ENST00000518196 AKNAQ7Z591 1439 aa19.95■□□□□ 0.78
PABPC1-205ENST00000518196 MIA2Q96PC5 1412 aa19.94■□□□□ 0.78
PABPC1-205ENST00000518196 FGD6Q6ZV73 1430 aa19.9■□□□□ 0.78
PABPC1-205ENST00000518196 ADGRL1O94910 1474 aa19.9■□□□□ 0.78
PABPC1-205ENST00000518196 PLEKHH2Q8IVE3 1493 aa19.9■□□□□ 0.78
PABPC1-205ENST00000518196 SAMD9LQ8IVG5 1584 aa19.88■□□□□ 0.77
PABPC1-205ENST00000518196 SCAPERQ9BY12 1400 aa19.88■□□□□ 0.77
PABPC1-205ENST00000518196 SAMD1Q6SPF0 538 aaPredicted RBP19.88■□□□□ 0.77
PABPC1-205ENST00000518196 ZNF644Q9H582 1327 aaPredicted RBP19.87■□□□□ 0.77
PABPC1-205ENST00000518196 PTPN23Q9H3S7 1636 aa19.87■□□□□ 0.77
PABPC1-205ENST00000518196 CAMSAP2Q08AD1 1489 aa19.86■□□□□ 0.77
PABPC1-205ENST00000518196 KIAA1107Q9UPP5 1409 aa19.86■□□□□ 0.77
PABPC1-205ENST00000518196 DENND4BO75064 1496 aaPredicted RBP19.86■□□□□ 0.77
PABPC1-205ENST00000518196 KDM6BO15054 1643 aa19.85■□□□□ 0.77
PABPC1-205ENST00000518196 HNRNPMP52272 730 aaKnown RBP eCLIP19.85■□□□□ 0.77
PABPC1-205ENST00000518196 ATF5Q9Y2D1 282 aaPredicted RBP19.85■□□□□ 0.77
PABPC1-205ENST00000518196 ABCC1P33527 1531 aa19.85■□□□□ 0.77
PABPC1-205ENST00000518196 FAM50AQ14320 339 aaKnown RBP19.84■□□□□ 0.77
PABPC1-205ENST00000518196 RSPH4AQ5TD94 716 aa19.83■□□□□ 0.77
PABPC1-205ENST00000518196 TCOF1Q13428 1488 aaKnown RBP19.83■□□□□ 0.76
PABPC1-205ENST00000518196 SYCP2Q9BX26 1530 aa19.82■□□□□ 0.76
PABPC1-205ENST00000518196 ARHGEF12Q9NZN5 1544 aa19.81■□□□□ 0.76
PABPC1-205ENST00000518196 COL17A1Q9UMD9 1497 aaPredicted RBP19.8■□□□□ 0.76
PABPC1-205ENST00000518196 RAPGEF3O95398 923 aa19.8■□□□□ 0.76
PABPC1-205ENST00000518196 RRBP1Q9P2E9 1410 aaKnown RBP19.79■□□□□ 0.76
PABPC1-205ENST00000518196 ZNF518AQ6AHZ1 1483 aa19.79■□□□□ 0.76
PABPC1-205ENST00000518196 POGZQ7Z3K3 1410 aa19.78■□□□□ 0.76
PABPC1-205ENST00000518196 TRAPPC8Q9Y2L5 1435 aa19.78■□□□□ 0.76
PABPC1-205ENST00000518196 AFAP1Q8N556 730 aa19.78■□□□□ 0.76
PABPC1-205ENST00000518196 RICTORQ6R327 1708 aa19.78■□□□□ 0.76
PABPC1-205ENST00000518196 MBD5Q9P267 1494 aa19.78■□□□□ 0.76
PABPC1-205ENST00000518196 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.77■□□□□ 0.769e-8■□□□□ 8.7
PABPC1-205ENST00000518196 ARHGEF5Q12774 1597 aa19.77■□□□□ 0.76
PABPC1-205ENST00000518196 TSPY4P0CV99 314 aa19.76■□□□□ 0.75
PABPC1-205ENST00000518196 TSPY10P0CW01 314 aa19.76■□□□□ 0.75
PABPC1-205ENST00000518196 CCDC141Q6ZP82 1450 aa19.75■□□□□ 0.75
PABPC1-205ENST00000518196 MYT1LQ9UL68 1186 aa19.75■□□□□ 0.75
PABPC1-205ENST00000518196 FRMPD1Q5SYB0 1578 aa19.74■□□□□ 0.75
PABPC1-205ENST00000518196 SPAG9O60271 1321 aaKnown RBP19.74■□□□□ 0.75
PABPC1-205ENST00000518196 KDM5CP41229 1560 aa19.72■□□□□ 0.75
PABPC1-205ENST00000518196 DNMT1P26358 1616 aaKnown RBP19.72■□□□□ 0.75
PABPC1-205ENST00000518196 DAPK1P53355 1430 aa19.71■□□□□ 0.75
PABPC1-205ENST00000518196 ZMYM4Q5VZL5 1548 aa19.71■□□□□ 0.75
PABPC1-205ENST00000518196 ABCC5O15440 1437 aa19.7■□□□□ 0.74
PABPC1-205ENST00000518196 MAGI2Q86UL8 1455 aa19.69■□□□□ 0.74
PABPC1-205ENST00000518196 RNF39Q9H2S5 420 aa19.69■□□□□ 0.74
PABPC1-205ENST00000518196 HECW2Q9P2P5 1572 aa19.69■□□□□ 0.74
PABPC1-205ENST00000518196 MLH3Q9UHC1 1453 aa19.68■□□□□ 0.74
PABPC1-205ENST00000518196 ITGAEP38570 1179 aa19.68■□□□□ 0.74
PABPC1-205ENST00000518196 RTEL1-TNFRSF6BF6WH68 1400 aa19.68■□□□□ 0.74
PABPC1-205ENST00000518196 CROCC2H7BZ55 1655 aa19.67■□□□□ 0.74
PABPC1-205ENST00000518196 C9orf84Q5VXU9 1444 aa19.66■□□□□ 0.74
PABPC1-205ENST00000518196 SHANK2Q9UPX8 1470 aa19.66■□□□□ 0.74
PABPC1-205ENST00000518196 ATP7AQ04656 1500 aa19.66■□□□□ 0.74
PABPC1-205ENST00000518196 MAST1Q9Y2H9 1570 aa19.66■□□□□ 0.74
PABPC1-205ENST00000518196 CHIC2Q9UKJ5 165 aa19.65■□□□□ 0.74
PABPC1-205ENST00000518196 ZFYVE16Q7Z3T8 1539 aa19.65■□□□□ 0.74
PABPC1-205ENST00000518196 KIDINS220Q9ULH0 1771 aa19.65■□□□□ 0.74
PABPC1-205ENST00000518196 INO80Q9ULG1 1556 aaPredicted RBP19.63■□□□□ 0.73
PABPC1-205ENST00000518196 YEATS2Q9ULM3 1422 aa19.61■□□□□ 0.73
PABPC1-205ENST00000518196 ANKRD30AQ9BXX3 1397 aa19.61■□□□□ 0.73
PABPC1-205ENST00000518196 ARHGEF40Q8TER5 1519 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms