RNA–Protein interactions for RNA: ENST00000518074.5

SPIDR-206, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 2,819 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-206ENST00000518074 FRMPD1Q5SYB0 1578 aa16.77■□□□□ 0.28
SPIDR-206ENST00000518074 DENND4BO75064 1496 aaPredicted RBP16.76■□□□□ 0.27
SPIDR-206ENST00000518074 CEP162Q5TB80 1403 aa16.76■□□□□ 0.27
SPIDR-206ENST00000518074 MYO5CQ9NQX4 1742 aa16.75■□□□□ 0.27
SPIDR-206ENST00000518074 RICTORQ6R327 1708 aa16.75■□□□□ 0.27
SPIDR-206ENST00000518074 ATP1B4Q9UN42 357 aaPredicted RBP16.74■□□□□ 0.27
SPIDR-206ENST00000518074 ZMYM4Q5VZL5 1548 aa16.74■□□□□ 0.27
SPIDR-206ENST00000518074 MAGI2Q86UL8 1455 aa16.72■□□□□ 0.27
SPIDR-206ENST00000518074 RAPGEF3O95398 923 aa16.7■□□□□ 0.26
SPIDR-206ENST00000518074 EFCAB2Q5VUJ9 269 aa16.7■□□□□ 0.26
SPIDR-206ENST00000518074 ARHGEF40Q8TER5 1519 aa16.69■□□□□ 0.26
SPIDR-206ENST00000518074 POGZQ7Z3K3 1410 aa16.67■□□□□ 0.26
SPIDR-206ENST00000518074 ZEB1P37275 1124 aaPredicted RBP16.67■□□□□ 0.26
SPIDR-206ENST00000518074 PREX2Q70Z35 1606 aa16.65■□□□□ 0.26
SPIDR-206ENST00000518074 SCAPERQ9BY12 1400 aa16.65■□□□□ 0.26
SPIDR-206ENST00000518074 DAXXQ9UER7 740 aaPredicted RBP16.65■□□□□ 0.26
SPIDR-206ENST00000518074 ADAMTSL3P82987 1691 aa16.64■□□□□ 0.25
SPIDR-206ENST00000518074 CCER1Q8TC90 406 aaPredicted RBP16.64■□□□□ 0.25
SPIDR-206ENST00000518074 CDC42BPBQ9Y5S2 1711 aa16.64■□□□□ 0.25
SPIDR-206ENST00000518074 ARHGAP5Q13017 1502 aa16.64■□□□□ 0.25
SPIDR-206ENST00000518074 ZFYVE16Q7Z3T8 1539 aa16.64■□□□□ 0.25
SPIDR-206ENST00000518074 BCORL1Q5H9F3 1711 aa16.62■□□□□ 0.25
SPIDR-206ENST00000518074 ZNF518AQ6AHZ1 1483 aa16.61■□□□□ 0.25
SPIDR-206ENST00000518074 KDM5CP41229 1560 aa16.61■□□□□ 0.25
SPIDR-206ENST00000518074 CDC42BPAQ5VT25 1732 aa16.6■□□□□ 0.25
SPIDR-206ENST00000518074 ABCC1P33527 1531 aa16.58■□□□□ 0.24
SPIDR-206ENST00000518074 ATP10AO60312 1499 aa16.57■□□□□ 0.24
SPIDR-206ENST00000518074 ITSN2Q9NZM3 1697 aa16.56■□□□□ 0.24
SPIDR-206ENST00000518074 EHBP1L1Q8N3D4 1523 aa16.56■□□□□ 0.24
SPIDR-206ENST00000518074 REREQ9P2R6 1566 aa16.55■□□□□ 0.24
SPIDR-206ENST00000518074 GPATCH8Q9UKJ3 1502 aaKnown RBP16.55■□□□□ 0.24
SPIDR-206ENST00000518074 MLH3Q9UHC1 1453 aa16.55■□□□□ 0.24
SPIDR-206ENST00000518074 YEATS2Q9ULM3 1422 aa16.55■□□□□ 0.24
SPIDR-206ENST00000518074 C9orf84Q5VXU9 1444 aa16.54■□□□□ 0.24
SPIDR-206ENST00000518074 HECW2Q9P2P5 1572 aa16.54■□□□□ 0.24
SPIDR-206ENST00000518074 PLEKHH2Q8IVE3 1493 aa16.54■□□□□ 0.24
SPIDR-206ENST00000518074 MTUS2Q5JR59 1369 aa16.54■□□□□ 0.24
SPIDR-206ENST00000518074 KIAA1107Q9UPP5 1409 aa16.53■□□□□ 0.24
SPIDR-206ENST00000518074 PTPRMP28827 1452 aa16.53■□□□□ 0.24
SPIDR-206ENST00000518074 ARHGEF12Q9NZN5 1544 aa16.51■□□□□ 0.23
SPIDR-206ENST00000518074 ARID4BQ4LE39 1312 aaPredicted RBP16.51■□□□□ 0.23
SPIDR-206ENST00000518074 MAP3K1Q13233 1512 aa16.51■□□□□ 0.23
SPIDR-206ENST00000518074 VPS8Q8N3P4 1428 aa16.51■□□□□ 0.23
SPIDR-206ENST00000518074 CCNB3Q8WWL7 1395 aa16.51■□□□□ 0.23
SPIDR-206ENST00000518074 MADDQ8WXG6 1647 aa16.51■□□□□ 0.23
SPIDR-206ENST00000518074 SAMD9LQ8IVG5 1584 aa16.5■□□□□ 0.23
SPIDR-206ENST00000518074 SIGLEC1Q9BZZ2 1709 aa16.5■□□□□ 0.23
SPIDR-206ENST00000518074 DIP2CQ9Y2E4 1556 aa16.49■□□□□ 0.23
SPIDR-206ENST00000518074 TRAPPC8Q9Y2L5 1435 aa16.48■□□□□ 0.23
SPIDR-206ENST00000518074 AFAP1Q8N556 730 aa16.48■□□□□ 0.23
SPIDR-206ENST00000518074 AGLP35573 1532 aa16.48■□□□□ 0.23
SPIDR-206ENST00000518074 TIAM1Q13009 1591 aa16.48■□□□□ 0.23
SPIDR-206ENST00000518074 CFDP1Q9UEE9 299 aaPredicted RBP16.46■□□□□ 0.23
SPIDR-206ENST00000518074 SUPT6HQ7KZ85 1726 aaKnown RBP16.46■□□□□ 0.23
SPIDR-206ENST00000518074 ABCA6Q8N139 1617 aa16.46■□□□□ 0.22
SPIDR-206ENST00000518074 RIMS1Q86UR5 1692 aaKnown RBP16.45■□□□□ 0.22
SPIDR-206ENST00000518074 KIDINS220Q9ULH0 1771 aa16.45■□□□□ 0.22
SPIDR-206ENST00000518074 SYCP2Q9BX26 1530 aa16.44■□□□□ 0.22
SPIDR-206ENST00000518074 FER1L4A9Z1Z3 1794 aa16.44■□□□□ 0.22
SPIDR-206ENST00000518074 NCOA2Q15596 1464 aa16.41■□□□□ 0.22
SPIDR-206ENST00000518074 INO80Q9ULG1 1556 aaPredicted RBP16.41■□□□□ 0.22
SPIDR-206ENST00000518074 LRRC9Q6ZRR7 1453 aa16.41■□□□□ 0.22
SPIDR-206ENST00000518074 ZNF777Q9ULD5 760 aaPredicted RBP16.39■□□□□ 0.21
SPIDR-206ENST00000518074 SPAG9O60271 1321 aaKnown RBP16.39■□□□□ 0.21
SPIDR-206ENST00000518074 MBD5Q9P267 1494 aa16.39■□□□□ 0.21
SPIDR-206ENST00000518074 ATP7AQ04656 1500 aa16.38■□□□□ 0.21
SPIDR-206ENST00000518074 RSPH4AQ5TD94 716 aa16.38■□□□□ 0.21
SPIDR-206ENST00000518074 RTEL1-TNFRSF6BF6WH68 1400 aa16.38■□□□□ 0.21
SPIDR-206ENST00000518074 HNRNPMP52272 730 aaKnown RBP eCLIP16.37■□□□□ 0.213e-6■■■■□ 25.9
SPIDR-206ENST00000518074 MYT1LQ9UL68 1186 aa16.37■□□□□ 0.21
SPIDR-206ENST00000518074 PLXNC1O60486 1568 aa16.35■□□□□ 0.21
SPIDR-206ENST00000518074 ADGBQ8N7X0 1667 aa16.35■□□□□ 0.21
SPIDR-206ENST00000518074 ARHGEF5Q12774 1597 aa16.34■□□□□ 0.21
SPIDR-206ENST00000518074 CNTLNQ9NXG0 1405 aa16.34■□□□□ 0.21
SPIDR-206ENST00000518074 LMTK3Q96Q04 1460 aa16.33■□□□□ 0.21
SPIDR-206ENST00000518074 MLECQ14165 292 aa16.33■□□□□ 0.2
SPIDR-206ENST00000518074 CAMSAP2Q08AD1 1489 aa16.33■□□□□ 0.2
SPIDR-206ENST00000518074 A2MP01023 1474 aa16.32■□□□□ 0.2
SPIDR-206ENST00000518074 CCDC141Q6ZP82 1450 aa16.32■□□□□ 0.2
SPIDR-206ENST00000518074 MIA2Q96PC5 1412 aa16.32■□□□□ 0.2
SPIDR-206ENST00000518074 MROH2AA6NES4 1674 aa16.32■□□□□ 0.2
SPIDR-206ENST00000518074 PPP6R1Q9UPN7 881 aa16.31■□□□□ 0.2
SPIDR-206ENST00000518074 ZNF644Q9H582 1327 aaPredicted RBP16.31■□□□□ 0.2
SPIDR-206ENST00000518074 PREX1Q8TCU6 1659 aa16.29■□□□□ 0.2
SPIDR-206ENST00000518074 BCL11AQ9H165 835 aa16.28■□□□□ 0.2
SPIDR-206ENST00000518074 SETD1BQ9UPS6 1966 aaKnown RBP16.28■□□□□ 0.2
SPIDR-206ENST00000518074 MYOM3Q5VTT5 1437 aa16.28■□□□□ 0.2
SPIDR-206ENST00000518074 MAST1Q9Y2H9 1570 aa16.27■□□□□ 0.2
SPIDR-206ENST00000518074 FAM135AQ9P2D6 1515 aa16.27■□□□□ 0.2
SPIDR-206ENST00000518074 C3P01024 1663 aa16.27■□□□□ 0.2
SPIDR-206ENST00000518074 KANK4Q5T7N3 995 aaPredicted RBP16.27■□□□□ 0.2
SPIDR-206ENST00000518074 DHX29Q7Z478 1369 aaKnown RBP16.26■□□□□ 0.19
SPIDR-206ENST00000518074 ESF1Q9H501 851 aaKnown RBP16.26■□□□□ 0.19
SPIDR-206ENST00000518074 NPATQ14207 1427 aa16.25■□□□□ 0.19
SPIDR-206ENST00000518074 TSPY4P0CV99 314 aa16.22■□□□□ 0.19
SPIDR-206ENST00000518074 TSPY10P0CW01 314 aa16.22■□□□□ 0.19
SPIDR-206ENST00000518074 UHRF1BP1Q6BDS2 1440 aa16.21■□□□□ 0.18
SPIDR-206ENST00000518074 ITGAEP38570 1179 aa16.2■□□□□ 0.18
SPIDR-206ENST00000518074 CEBPAP49715 358 aaPredicted RBP16.19■□□□□ 0.18
SPIDR-206ENST00000518074 ZMYM3Q14202 1370 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms