RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 PLCH2O75038 1416 aa19.28■□□□□ 0.68
TRAPPC9-203ENST00000517667 ARHGEF12Q9NZN5 1544 aa19.28■□□□□ 0.68
TRAPPC9-203ENST00000517667 SCAPERQ9BY12 1400 aa19.27■□□□□ 0.68
TRAPPC9-203ENST00000517667 CDK13Q14004 1512 aaKnown RBP19.27■□□□□ 0.68
TRAPPC9-203ENST00000517667 CERKQ8TCT0 537 aa19.27■□□□□ 0.68
TRAPPC9-203ENST00000517667 C9orf84Q5VXU9 1444 aa19.26■□□□□ 0.67
TRAPPC9-203ENST00000517667 ATP10AO60312 1499 aa19.26■□□□□ 0.67
TRAPPC9-203ENST00000517667 MLECQ14165 292 aa19.25■□□□□ 0.67
TRAPPC9-203ENST00000517667 ZNF518AQ6AHZ1 1483 aa19.21■□□□□ 0.67
TRAPPC9-203ENST00000517667 KIF14Q15058 1648 aa19.2■□□□□ 0.66
TRAPPC9-203ENST00000517667 FMN1Q68DA7 1419 aa19.19■□□□□ 0.66
TRAPPC9-203ENST00000517667 EFCAB2Q5VUJ9 269 aa19.19■□□□□ 0.66
TRAPPC9-203ENST00000517667 DMRT2Q9Y5R5 561 aa19.18■□□□□ 0.66
TRAPPC9-203ENST00000517667 KDM5CP41229 1560 aa19.18■□□□□ 0.66
TRAPPC9-203ENST00000517667 STRCQ7RTU9 1775 aa19.17■□□□□ 0.66
TRAPPC9-203ENST00000517667 CDK11AQ9UQ88 783 aaPredicted RBP19.16■□□□□ 0.66
TRAPPC9-203ENST00000517667 UHRF1BP1Q6BDS2 1440 aa19.16■□□□□ 0.66
TRAPPC9-203ENST00000517667 SETD1BQ9UPS6 1966 aaKnown RBP19.15■□□□□ 0.66
TRAPPC9-203ENST00000517667 REREQ9P2R6 1566 aa19.15■□□□□ 0.66
TRAPPC9-203ENST00000517667 ARHGAP5Q13017 1502 aa19.15■□□□□ 0.66
TRAPPC9-203ENST00000517667 DIP2CQ9Y2E4 1556 aa19.13■□□□□ 0.65
TRAPPC9-203ENST00000517667 CLIP1P30622 1438 aa19.11■□□□□ 0.65
TRAPPC9-203ENST00000517667 TROQ12816 1431 aaPredicted RBP19.1■□□□□ 0.65
TRAPPC9-203ENST00000517667 CEBPAP49715 358 aaPredicted RBP19.1■□□□□ 0.65
TRAPPC9-203ENST00000517667 ATP1B4Q9UN42 357 aaPredicted RBP19.1■□□□□ 0.65
TRAPPC9-203ENST00000517667 C3P01024 1663 aa19.1■□□□□ 0.65
TRAPPC9-203ENST00000517667 ABCA6Q8N139 1617 aa19.08■□□□□ 0.65
TRAPPC9-203ENST00000517667 ARHGAP35Q9NRY4 1499 aa19.08■□□□□ 0.64
TRAPPC9-203ENST00000517667 CDC42BPBQ9Y5S2 1711 aa19.08■□□□□ 0.64
TRAPPC9-203ENST00000517667 DISP3Q9P2K9 1392 aa19.07■□□□□ 0.64
TRAPPC9-203ENST00000517667 MLH3Q9UHC1 1453 aa19.07■□□□□ 0.64
TRAPPC9-203ENST00000517667 PTPRTO14522 1441 aa19.07■□□□□ 0.64
TRAPPC9-203ENST00000517667 LRRIQ1Q96JM4 1722 aa19.06■□□□□ 0.64
TRAPPC9-203ENST00000517667 AFAP1Q8N556 730 aa19.06■□□□□ 0.64
TRAPPC9-203ENST00000517667 MYT1LQ9UL68 1186 aa19.06■□□□□ 0.64
TRAPPC9-203ENST00000517667 PREX2Q70Z35 1606 aa19.06■□□□□ 0.64
TRAPPC9-203ENST00000517667 AGLP35573 1532 aa19.05■□□□□ 0.64
TRAPPC9-203ENST00000517667 ITSN2Q9NZM3 1697 aa19.04■□□□□ 0.64
TRAPPC9-203ENST00000517667 UBTFP17480 764 aaKnown RBP19.03■□□□□ 0.64
TRAPPC9-203ENST00000517667 ESF1Q9H501 851 aaKnown RBP19.03■□□□□ 0.64
TRAPPC9-203ENST00000517667 ABCC1P33527 1531 aa19.03■□□□□ 0.64
TRAPPC9-203ENST00000517667 SPATA31D1Q6ZQQ2 1576 aa19.02■□□□□ 0.64
TRAPPC9-203ENST00000517667 IQSEC2Q5JU85 1478 aa19.02■□□□□ 0.63
TRAPPC9-203ENST00000517667 CNTLNQ9NXG0 1405 aa19■□□□□ 0.63
TRAPPC9-203ENST00000517667 TRAPPC8Q9Y2L5 1435 aa19■□□□□ 0.63
TRAPPC9-203ENST00000517667 SOCS7O14512 581 aa19■□□□□ 0.63
TRAPPC9-203ENST00000517667 KIDINS220Q9ULH0 1771 aa18.98■□□□□ 0.63
TRAPPC9-203ENST00000517667 MROH2AA6NES4 1674 aa18.98■□□□□ 0.63
TRAPPC9-203ENST00000517667 CCDC18Q5T9S5 1454 aa18.98■□□□□ 0.63
TRAPPC9-203ENST00000517667 LTBP4Q8N2S1 1624 aa18.98■□□□□ 0.63
TRAPPC9-203ENST00000517667 ILDR2Q71H61 639 aa18.97■□□□□ 0.63
TRAPPC9-203ENST00000517667 NCOA1Q15788 1441 aa18.96■□□□□ 0.63
TRAPPC9-203ENST00000517667 CDC42BPAQ5VT25 1732 aa18.96■□□□□ 0.63
TRAPPC9-203ENST00000517667 NPATQ14207 1427 aa18.93■□□□□ 0.62
TRAPPC9-203ENST00000517667 EHMT2Q96KQ7 1210 aa18.92■□□□□ 0.62
TRAPPC9-203ENST00000517667 CAMSAP1Q5T5Y3 1602 aa18.92■□□□□ 0.62
TRAPPC9-203ENST00000517667 CASKIN1Q8WXD9 1431 aa18.91■□□□□ 0.62
TRAPPC9-203ENST00000517667 SAMD9LQ8IVG5 1584 aa18.9■□□□□ 0.62
TRAPPC9-203ENST00000517667 ZNF142P52746 1687 aaPredicted RBP18.89■□□□□ 0.61
TRAPPC9-203ENST00000517667 SUPT6HQ7KZ85 1726 aaKnown RBP18.88■□□□□ 0.61
TRAPPC9-203ENST00000517667 MYO3AQ8NEV4 1616 aa18.86■□□□□ 0.61
TRAPPC9-203ENST00000517667 CLTCQ00610 1675 aaKnown RBP18.85■□□□□ 0.61
TRAPPC9-203ENST00000517667 SYCP2Q9BX26 1530 aa18.85■□□□□ 0.61
TRAPPC9-203ENST00000517667 FYCO1Q9BQS8 1478 aa18.85■□□□□ 0.61
TRAPPC9-203ENST00000517667 ZMYM3Q14202 1370 aa18.84■□□□□ 0.61
TRAPPC9-203ENST00000517667 PLXNC1O60486 1568 aa18.84■□□□□ 0.61
TRAPPC9-203ENST00000517667 ATP7AQ04656 1500 aa18.84■□□□□ 0.61
TRAPPC9-203ENST00000517667 PLA2R1Q13018 1463 aa18.84■□□□□ 0.61
TRAPPC9-203ENST00000517667 INO80Q9ULG1 1556 aaPredicted RBP18.83■□□□□ 0.6
TRAPPC9-203ENST00000517667 CEP170BQ9Y4F5 1589 aaPredicted RBP18.82■□□□□ 0.6
TRAPPC9-203ENST00000517667 SPAG9O60271 1321 aaKnown RBP18.81■□□□□ 0.6
TRAPPC9-203ENST00000517667 PLEKHH2Q8IVE3 1493 aa18.81■□□□□ 0.6
TRAPPC9-203ENST00000517667 PKD2Q13563 968 aa18.8■□□□□ 0.6
TRAPPC9-203ENST00000517667 GPATCH8Q9UKJ3 1502 aaKnown RBP18.79■□□□□ 0.6
TRAPPC9-203ENST00000517667 ZNF777Q9ULD5 760 aaPredicted RBP18.79■□□□□ 0.6
TRAPPC9-203ENST00000517667 KIAA1107Q9UPP5 1409 aa18.79■□□□□ 0.6
TRAPPC9-203ENST00000517667 ADGBQ8N7X0 1667 aa18.79■□□□□ 0.6
TRAPPC9-203ENST00000517667 A2MP01023 1474 aa18.78■□□□□ 0.6
TRAPPC9-203ENST00000517667 TCOF1Q13428 1488 aaKnown RBP18.78■□□□□ 0.6
TRAPPC9-203ENST00000517667 ZNF335Q9H4Z2 1342 aaPredicted RBP18.76■□□□□ 0.59
TRAPPC9-203ENST00000517667 NCKAP5LQ9HCH0 1330 aa18.76■□□□□ 0.59
TRAPPC9-203ENST00000517667 PTPRKQ15262 1439 aa18.76■□□□□ 0.59
TRAPPC9-203ENST00000517667 UBAP1LF5GYI3 381 aa18.75■□□□□ 0.59
TRAPPC9-203ENST00000517667 HNRNPMP52272 730 aaKnown RBP eCLIP18.74■□□□□ 0.599e-7■■■■■ 34.1
TRAPPC9-203ENST00000517667 PPP6R1Q9UPN7 881 aa18.73■□□□□ 0.59
TRAPPC9-203ENST00000517667 CFDP1Q9UEE9 299 aaPredicted RBP18.72■□□□□ 0.59
TRAPPC9-203ENST00000517667 POLR1AO95602 1720 aaPredicted RBP18.71■□□□□ 0.59
TRAPPC9-203ENST00000517667 CCNB3Q8WWL7 1395 aa18.71■□□□□ 0.59
TRAPPC9-203ENST00000517667 A2ML1A8K2U0 1454 aa18.71■□□□□ 0.59
TRAPPC9-203ENST00000517667 DNMT1P26358 1616 aaKnown RBP18.7■□□□□ 0.58
TRAPPC9-203ENST00000517667 CHIC1Q5VXU3 224 aa18.69■□□□□ 0.58
TRAPPC9-203ENST00000517667 GGT6Q6P531 493 aa18.69■□□□□ 0.58
TRAPPC9-203ENST00000517667 CPS1P31327 1500 aa18.67■□□□□ 0.58
TRAPPC9-203ENST00000517667 FAM135AQ9P2D6 1515 aa18.66■□□□□ 0.58
TRAPPC9-203ENST00000517667 MTUS2Q5JR59 1369 aa18.65■□□□□ 0.58
TRAPPC9-203ENST00000517667 TIAM1Q13009 1591 aa18.64■□□□□ 0.58
TRAPPC9-203ENST00000517667 RTEL1-TNFRSF6BF6WH68 1400 aa18.64■□□□□ 0.57
TRAPPC9-203ENST00000517667 NEURL4Q96JN8 1562 aa18.63■□□□□ 0.57
TRAPPC9-203ENST00000517667 EHBP1L1Q8N3D4 1523 aa18.62■□□□□ 0.57
TRAPPC9-203ENST00000517667 MED1Q15648 1581 aaPredicted RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms