RNA–Protein interactions for RNA: ENST00000515798.5

BRIX1-205, Transcript of BRX1, biogenesis of ribosomes, humanhuman

TSL 2

Gene BRIX1, Length 2,196 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIX1-205ENST00000515798 TIAM1Q13009 1591 aa14□□□□□ -0.17
BRIX1-205ENST00000515798 SLC4A3P48751 1232 aa14□□□□□ -0.17
BRIX1-205ENST00000515798 TAF7LQ5H9L4 462 aa14□□□□□ -0.17
BRIX1-205ENST00000515798 SMAP1Q8IYB5 467 aaPredicted RBP14□□□□□ -0.17
BRIX1-205ENST00000515798 HSPA5P11021 654 aaKnown RBP13.99□□□□□ -0.17
BRIX1-205ENST00000515798 EXOC6Q8TAG9 804 aa13.99□□□□□ -0.17
BRIX1-205ENST00000515798 CCDC7Q96M83 1385 aa13.99□□□□□ -0.17
BRIX1-205ENST00000515798 XRCC6P12956 609 aaKnown RBP eCLIP13.98□□□□□ -0.17
BRIX1-205ENST00000515798 PRXQ9BXM0 1461 aa13.98□□□□□ -0.17
BRIX1-205ENST00000515798 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.97□□□□□ -0.17
BRIX1-205ENST00000515798 GOLGA6L3A6NEY3 463 aa13.96□□□□□ -0.17
BRIX1-205ENST00000515798 NCLP19338 710 aaKnown RBP13.95□□□□□ -0.18
BRIX1-205ENST00000515798 TERF1P54274 439 aa13.95□□□□□ -0.18
BRIX1-205ENST00000515798 EIF4G2P78344 907 aaKnown RBP eCLIP13.95□□□□□ -0.18
BRIX1-205ENST00000515798 ESPNB1AK53 854 aa13.94□□□□□ -0.18
BRIX1-205ENST00000515798 UACAQ9BZF9 1416 aa13.94□□□□□ -0.18
BRIX1-205ENST00000515798 FAM161AQ3B820 660 aa13.93□□□□□ -0.18
BRIX1-205ENST00000515798 VIRMAQ69YN4 1812 aaKnown RBP13.92□□□□□ -0.18
BRIX1-205ENST00000515798 UTP14CQ5TAP6 766 aaKnown RBP13.92□□□□□ -0.18
BRIX1-205ENST00000515798 KLHL34Q8N239 644 aa13.92□□□□□ -0.18
BRIX1-205ENST00000515798 SMARCA4P51532 1647 aa13.92□□□□□ -0.18
BRIX1-205ENST00000515798 ISY1Q9ULR0 285 aaKnown RBP13.91□□□□□ -0.18
BRIX1-205ENST00000515798 LRRC9Q6ZRR7 1453 aa13.91□□□□□ -0.18
BRIX1-205ENST00000515798 MRE11P49959 708 aa13.9□□□□□ -0.18
BRIX1-205ENST00000515798 BBXQ8WY36 941 aaPredicted RBP13.9□□□□□ -0.18
BRIX1-205ENST00000515798 ARHGAP35Q9NRY4 1499 aa13.9□□□□□ -0.18
BRIX1-205ENST00000515798 GTF2E1P29083 439 aaPredicted RBP13.9□□□□□ -0.18
BRIX1-205ENST00000515798 NAP1L2Q9ULW6 460 aaPredicted RBP13.9□□□□□ -0.18
BRIX1-205ENST00000515798 KTN1Q86UP2 1357 aaKnown RBP13.89□□□□□ -0.19
BRIX1-205ENST00000515798 PHLDB1Q86UU1 1377 aa13.89□□□□□ -0.19
BRIX1-205ENST00000515798 C8orf34Q49A92 452 aa13.89□□□□□ -0.19
BRIX1-205ENST00000515798 CFAP43Q8NDM7 1665 aa13.88□□□□□ -0.19
BRIX1-205ENST00000515798 MTERF4Q7Z6M4 381 aaKnown RBP13.88□□□□□ -0.19
BRIX1-205ENST00000515798 RCAN3Q9UKA8 241 aa13.88□□□□□ -0.19
BRIX1-205ENST00000515798 CCDC18Q5T9S5 1454 aa13.88□□□□□ -0.19
BRIX1-205ENST00000515798 ZNF326Q5BKZ1 582 aaKnown RBP13.88□□□□□ -0.19
BRIX1-205ENST00000515798 IPO4Q8TEX9 1081 aaKnown RBP13.88□□□□□ -0.19
BRIX1-205ENST00000515798 MYOM3Q5VTT5 1437 aa13.87□□□□□ -0.19
BRIX1-205ENST00000515798 STAC3Q96MF2 364 aa13.87□□□□□ -0.19
BRIX1-205ENST00000515798 CANXP27824 592 aaKnown RBP13.86□□□□□ -0.19
BRIX1-205ENST00000515798 PANK2Q9BZ23 570 aa13.86□□□□□ -0.19
BRIX1-205ENST00000515798 KDM2BQ8NHM5 1336 aa13.85□□□□□ -0.19
BRIX1-205ENST00000515798 ERBB4Q15303 1308 aa13.85□□□□□ -0.19
BRIX1-205ENST00000515798 KIAA1211Q6ZU35 1233 aa13.85□□□□□ -0.19
BRIX1-205ENST00000515798 MYH16Q9H6N6 1097 aa13.85□□□□□ -0.19
BRIX1-205ENST00000515798 LRPPRCP42704 1394 aaKnown RBP13.84□□□□□ -0.19
BRIX1-205ENST00000515798 PDE3BQ13370 1112 aa13.84□□□□□ -0.19
BRIX1-205ENST00000515798 DHX29Q7Z478 1369 aaKnown RBP13.83□□□□□ -0.19
BRIX1-205ENST00000515798 PTPN23Q9H3S7 1636 aa13.83□□□□□ -0.2
BRIX1-205ENST00000515798 RIPK4P57078 832 aa13.83□□□□□ -0.2
BRIX1-205ENST00000515798 DMTNQ08495 405 aa13.83□□□□□ -0.2
BRIX1-205ENST00000515798 BECN1Q14457 450 aa13.83□□□□□ -0.2
BRIX1-205ENST00000515798 PNISRQ8TF01 805 aaKnown RBP13.83□□□□□ -0.2
BRIX1-205ENST00000515798 CNGB1Q14028 1251 aaPredicted RBP13.82□□□□□ -0.2
BRIX1-205ENST00000515798 RSPH4AQ5TD94 716 aa13.82□□□□□ -0.2
BRIX1-205ENST00000515798 CENPQQ7L2Z9 268 aaPredicted RBP13.82□□□□□ -0.2
BRIX1-205ENST00000515798 TOP2BQ02880 1626 aa13.82□□□□□ -0.2
BRIX1-205ENST00000515798 HFM1A2PYH4 1435 aa13.82□□□□□ -0.2
BRIX1-205ENST00000515798 OFD1O75665 1012 aa13.82□□□□□ -0.2
BRIX1-205ENST00000515798 FAM50AQ14320 339 aaKnown RBP13.81□□□□□ -0.2
BRIX1-205ENST00000515798 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.81□□□□□ -0.2
BRIX1-205ENST00000515798 ANTXR1Q9H6X2 564 aa13.81□□□□□ -0.2
BRIX1-205ENST00000515798 TRIM44Q96DX7 344 aaPredicted RBP13.79□□□□□ -0.2
BRIX1-205ENST00000515798 GRPEL1Q9HAV7 217 aa13.79□□□□□ -0.2
BRIX1-205ENST00000515798 KIF7Q2M1P5 1343 aa13.79□□□□□ -0.2
BRIX1-205ENST00000515798 BIVM-ERCC5R4GMW8 1640 aa13.79□□□□□ -0.2
BRIX1-205ENST00000515798 SPATA31E1Q6ZUB1 1445 aa13.78□□□□□ -0.2
BRIX1-205ENST00000515798 HECW1Q76N89 1606 aa13.77□□□□□ -0.21
BRIX1-205ENST00000515798 ARID4BQ4LE39 1312 aaPredicted RBP13.76□□□□□ -0.21
BRIX1-205ENST00000515798 MCM4P33991 863 aa13.76□□□□□ -0.21
BRIX1-205ENST00000515798 USP19O94966 1318 aa13.76□□□□□ -0.21
BRIX1-205ENST00000515798 KIF20AO95235 890 aa13.75□□□□□ -0.21
BRIX1-205ENST00000515798 CRBNQ96SW2 442 aa13.75□□□□□ -0.21
BRIX1-205ENST00000515798 CHMP4BQ9H444 224 aaKnown RBP13.75□□□□□ -0.21
BRIX1-205ENST00000515798 ZHX1Q9UKY1 873 aaPredicted RBP13.75□□□□□ -0.21
BRIX1-205ENST00000515798 SKAP1Q86WV1 359 aa13.75□□□□□ -0.21
BRIX1-205ENST00000515798 TNNT2P45379 298 aaPredicted RBP13.73□□□□□ -0.21
BRIX1-205ENST00000515798 BRD4O60885 1362 aaPredicted RBP13.73□□□□□ -0.21
BRIX1-205ENST00000515798 PPP4R3BQ5MIZ7 849 aa13.73□□□□□ -0.21
BRIX1-205ENST00000515798 GTPBP4Q9BZE4 634 aaKnown RBP13.73□□□□□ -0.21
BRIX1-205ENST00000515798 MIA2Q96PC5 1412 aa13.73□□□□□ -0.21
BRIX1-205ENST00000515798 FMN1Q68DA7 1419 aa13.72□□□□□ -0.21
BRIX1-205ENST00000515798 ZSCAN30Q86W11 494 aa13.72□□□□□ -0.21
BRIX1-205ENST00000515798 TMEM51Q9NW97 253 aa13.72□□□□□ -0.21
BRIX1-205ENST00000515798 DYNC1I1O14576 645 aa13.71□□□□□ -0.21
BRIX1-205ENST00000515798 TRAK2O60296 914 aa13.71□□□□□ -0.21
BRIX1-205ENST00000515798 FAM13BQ9NYF5 915 aa13.71□□□□□ -0.21
BRIX1-205ENST00000515798 ZSCAN20P17040 1043 aaPredicted RBP13.71□□□□□ -0.22
BRIX1-205ENST00000515798 INSRP06213 1382 aa13.7□□□□□ -0.22
BRIX1-205ENST00000515798 AQRO60306 1485 aaKnown RBP eCLIP13.7□□□□□ -0.226e-7■■■□□ 16.7
BRIX1-205ENST00000515798 NLRP1Q9C000 1473 aa13.7□□□□□ -0.22
BRIX1-205ENST00000515798 NAIPQ13075 1403 aa13.7□□□□□ -0.22
BRIX1-205ENST00000515798 TAF3Q5VWG9 929 aa13.7□□□□□ -0.22
BRIX1-205ENST00000515798 TMC1Q8TDI8 760 aa13.7□□□□□ -0.22
BRIX1-205ENST00000515798 PPP1R9BQ96SB3 815 aa13.7□□□□□ -0.22
BRIX1-205ENST00000515798 ZMYM4Q5VZL5 1548 aa13.7□□□□□ -0.22
BRIX1-205ENST00000515798 ROCK2O75116 1388 aaKnown RBP13.7□□□□□ -0.22
BRIX1-205ENST00000515798 CCDC144AA2RUR9 1427 aa13.69□□□□□ -0.22
BRIX1-205ENST00000515798 CCDC173Q0VFZ6 552 aa13.69□□□□□ -0.22
BRIX1-205ENST00000515798 CCDC94Q9BW85 323 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms