RNA–Protein interactions for RNA: ENST00000515795.1

FAM20C-205, Transcript of FAM20C, golgi associated secretory pathway kinase, humanhuman

TSL 1 (best)

Gene FAM20C, Length 2,177 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM20C-205ENST00000515795 ABCC5O15440 1437 aa28.44■■■□□ 2.14
FAM20C-205ENST00000515795 ANP32CO43423 234 aa28.42■■■□□ 2.14
FAM20C-205ENST00000515795 PLB1Q6P1J6 1458 aa28.41■■■□□ 2.14
FAM20C-205ENST00000515795 TROQ12816 1431 aaPredicted RBP28.41■■■□□ 2.14
FAM20C-205ENST00000515795 PRG4Q92954 1404 aaPredicted RBP28.41■■■□□ 2.14
FAM20C-205ENST00000515795 CARMIL2Q6F5E8 1435 aa28.39■■■□□ 2.13
FAM20C-205ENST00000515795 CCER2I3L3R5 266 aa28.37■■■□□ 2.13
FAM20C-205ENST00000515795 JPH4Q96JJ6 628 aa28.37■■■□□ 2.13
FAM20C-205ENST00000515795 NUP160Q12769 1436 aa28.37■■■□□ 2.13
FAM20C-205ENST00000515795 SUPT16HQ9Y5B9 1047 aaKnown RBP28.35■■■□□ 2.13
FAM20C-205ENST00000515795 FOXD1Q16676 465 aa28.35■■■□□ 2.13
FAM20C-205ENST00000515795 CFDP1Q9UEE9 299 aaPredicted RBP28.33■■■□□ 2.13
FAM20C-205ENST00000515795 ITSN2Q9NZM3 1697 aa28.31■■■□□ 2.12
FAM20C-205ENST00000515795 CAMSAP2Q08AD1 1489 aa28.31■■■□□ 2.12
FAM20C-205ENST00000515795 L3MBTL2Q969R5 705 aa28.29■■■□□ 2.12
FAM20C-205ENST00000515795 GPATCH8Q9UKJ3 1502 aaKnown RBP28.29■■■□□ 2.12
FAM20C-205ENST00000515795 KIF14Q15058 1648 aa28.28■■■□□ 2.12
FAM20C-205ENST00000515795 ADCY10Q96PN6 1610 aa28.28■■■□□ 2.12
FAM20C-205ENST00000515795 ANKRD30BQ9BXX2 1392 aa28.28■■■□□ 2.12
FAM20C-205ENST00000515795 HSPA5P11021 654 aaKnown RBP28.27■■■□□ 2.12
FAM20C-205ENST00000515795 SLC4A1APQ9BWU0 796 aaKnown RBP28.25■■■□□ 2.11
FAM20C-205ENST00000515795 ZNF777Q9ULD5 760 aaPredicted RBP28.24■■■□□ 2.11
FAM20C-205ENST00000515795 EIF4G2P78344 907 aaKnown RBP eCLIP28.23■■■□□ 2.11
FAM20C-205ENST00000515795 RPRD2Q5VT52 1461 aaKnown RBP28.23■■■□□ 2.11
FAM20C-205ENST00000515795 NCOA1Q15788 1441 aa28.21■■■□□ 2.11
FAM20C-205ENST00000515795 ADGBQ8N7X0 1667 aa28.2■■■□□ 2.11
FAM20C-205ENST00000515795 WASHC2AQ641Q2 1341 aa28.19■■■□□ 2.1
FAM20C-205ENST00000515795 ABCA8O94911 1581 aa28.18■■■□□ 2.1
FAM20C-205ENST00000515795 PLEKHD1A6NEE1 506 aa28.18■■■□□ 2.1
FAM20C-205ENST00000515795 CROCC2H7BZ55 1655 aa28.16■■■□□ 2.1
FAM20C-205ENST00000515795 ADGRL2O95490 1459 aa28.15■■■□□ 2.1
FAM20C-205ENST00000515795 PZPP20742 1482 aa28.14■■■□□ 2.1
FAM20C-205ENST00000515795 TEX14Q8IWB6 1497 aa28.14■■■□□ 2.1
FAM20C-205ENST00000515795 ATP10BO94823 1461 aa28.13■■■□□ 2.09
FAM20C-205ENST00000515795 ANKRD30AQ9BXX3 1397 aa28.11■■■□□ 2.09
FAM20C-205ENST00000515795 NBPF8Q3BBV2 869 aa28.11■■■□□ 2.09
FAM20C-205ENST00000515795 CDC42BPAQ5VT25 1732 aa28.09■■■□□ 2.09
FAM20C-205ENST00000515795 ABCC10Q5T3U5 1492 aa28.08■■■□□ 2.09
FAM20C-205ENST00000515795 KIAA1107Q9UPP5 1409 aa28.03■■■□□ 2.08
FAM20C-205ENST00000515795 ANKRD50Q9ULJ7 1429 aa28.03■■■□□ 2.08
FAM20C-205ENST00000515795 CNTLNQ9NXG0 1405 aa28.02■■■□□ 2.08
FAM20C-205ENST00000515795 C11orf95C9JLR9 678 aaPredicted RBP28.01■■■□□ 2.08
FAM20C-205ENST00000515795 PTPRGP23470 1445 aa28.01■■■□□ 2.07
FAM20C-205ENST00000515795 CCDC7Q96M83 1385 aa28■■■□□ 2.07
FAM20C-205ENST00000515795 PKD2Q13563 968 aa28■■■□□ 2.07
FAM20C-205ENST00000515795 SHANK2Q9UPX8 1470 aa28■■■□□ 2.07
FAM20C-205ENST00000515795 C9orf84Q5VXU9 1444 aa27.99■■■□□ 2.07
FAM20C-205ENST00000515795 FKBP8Q14318 412 aa27.98■■■□□ 2.07
FAM20C-205ENST00000515795 TSPY4P0CV99 314 aa27.96■■■□□ 2.07
FAM20C-205ENST00000515795 TSPY10P0CW01 314 aa27.96■■■□□ 2.07
FAM20C-205ENST00000515795 SPATA31E1Q6ZUB1 1445 aa27.96■■■□□ 2.07
FAM20C-205ENST00000515795 MBD5Q9P267 1494 aa27.92■■■□□ 2.06
FAM20C-205ENST00000515795 NUP155O75694 1391 aa27.91■■■□□ 2.06
FAM20C-205ENST00000515795 NEFLP07196 543 aa27.91■■■□□ 2.06
FAM20C-205ENST00000515795 HNRNPMP52272 730 aaKnown RBP eCLIP27.9■■■□□ 2.06
FAM20C-205ENST00000515795 BCANQ96GW7 911 aa27.9■■■□□ 2.06
FAM20C-205ENST00000515795 HNRNPUQ00839 825 aaKnown RBP eCLIP27.89■■■□□ 2.06
FAM20C-205ENST00000515795 CHD1O14646 1710 aa27.89■■■□□ 2.05
FAM20C-205ENST00000515795 KIF7Q2M1P5 1343 aa27.88■■■□□ 2.05
FAM20C-205ENST00000515795 ARHGEF5Q12774 1597 aa27.88■■■□□ 2.05
FAM20C-205ENST00000515795 POLR1AO95602 1720 aaPredicted RBP27.87■■■□□ 2.05
FAM20C-205ENST00000515795 KIF15Q9NS87 1388 aa27.86■■■□□ 2.05
FAM20C-205ENST00000515795 ZNF326Q5BKZ1 582 aaKnown RBP27.85■■■□□ 2.05
FAM20C-205ENST00000515795 PRKRIP1Q9H875 184 aaPredicted RBP27.85■■■□□ 2.05
FAM20C-205ENST00000515795 KDM5DQ9BY66 1539 aa27.83■■■□□ 2.05
FAM20C-205ENST00000515795 CDC42BPBQ9Y5S2 1711 aa27.82■■■□□ 2.04
FAM20C-205ENST00000515795 PREX2Q70Z35 1606 aa27.82■■■□□ 2.04
FAM20C-205ENST00000515795 SAMD9LQ8IVG5 1584 aa27.81■■■□□ 2.04
FAM20C-205ENST00000515795 CCDC141Q6ZP82 1450 aa27.8■■■□□ 2.04
FAM20C-205ENST00000515795 CCDC184Q52MB2 194 aa27.8■■■□□ 2.04
FAM20C-205ENST00000515795 USP47Q96K76 1375 aa27.79■■■□□ 2.04
FAM20C-205ENST00000515795 SHROOM2Q13796 1616 aa27.78■■■□□ 2.04
FAM20C-205ENST00000515795 RSPH4AQ5TD94 716 aa27.77■■■□□ 2.04
FAM20C-205ENST00000515795 TSHZ2Q9NRE2 1034 aa27.75■■■□□ 2.03
FAM20C-205ENST00000515795 UHRF1BP1Q6BDS2 1440 aa27.74■■■□□ 2.03
FAM20C-205ENST00000515795 MRS2Q9HD23 443 aa27.73■■■□□ 2.03
FAM20C-205ENST00000515795 ARHGEF12Q9NZN5 1544 aa27.72■■■□□ 2.03
FAM20C-205ENST00000515795 KDM5CP41229 1560 aa27.71■■■□□ 2.03
FAM20C-205ENST00000515795 BCORL1Q5H9F3 1711 aa27.7■■■□□ 2.03
FAM20C-205ENST00000515795 TTC37Q6PGP7 1564 aa27.7■■■□□ 2.03
FAM20C-205ENST00000515795 ARHGAP5Q13017 1502 aa27.7■■■□□ 2.02
FAM20C-205ENST00000515795 FAM9BQ8IZU0 186 aa27.69■■■□□ 2.02
FAM20C-205ENST00000515795 RALGAPBQ86X10 1494 aa27.69■■■□□ 2.02
FAM20C-205ENST00000515795 SYCP2Q9BX26 1530 aa27.69■■■□□ 2.02
FAM20C-205ENST00000515795 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.68■■■□□ 2.02
FAM20C-205ENST00000515795 ERCC6L2Q5T890 1561 aa27.68■■■□□ 2.02
FAM20C-205ENST00000515795 ABCC2Q92887 1545 aa27.67■■■□□ 2.02
FAM20C-205ENST00000515795 FAM135AQ9P2D6 1515 aa27.67■■■□□ 2.02
FAM20C-205ENST00000515795 POLR3GLQ9BT43 218 aa27.66■■■□□ 2.02
FAM20C-205ENST00000515795 ARID4BQ4LE39 1312 aaPredicted RBP27.65■■■□□ 2.02
FAM20C-205ENST00000515795 CARD11Q9BXL7 1154 aa27.65■■■□□ 2.02
FAM20C-205ENST00000515795 KDM2AQ9Y2K7 1162 aa27.65■■■□□ 2.02
FAM20C-205ENST00000515795 DCAF11Q8TEB1 546 aa27.63■■■□□ 2.01
FAM20C-205ENST00000515795 DHX29Q7Z478 1369 aaKnown RBP27.62■■■□□ 2.01
FAM20C-205ENST00000515795 MAST1Q9Y2H9 1570 aa27.62■■■□□ 2.01
FAM20C-205ENST00000515795 MYO5CQ9NQX4 1742 aa27.61■■■□□ 2.01
FAM20C-205ENST00000515795 PLEKHH2Q8IVE3 1493 aa27.58■■■□□ 2
FAM20C-205ENST00000515795 UNC13BO14795 1591 aa27.56■■■□□ 2
FAM20C-205ENST00000515795 ZBED9Q6R2W3 1325 aa27.55■■■□□ 2
FAM20C-205ENST00000515795 CCDC144AA2RUR9 1427 aa27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms