RNA–Protein interactions for RNA: ENST00000515749.1

SEC31A-241, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

TSL 2

Gene SEC31A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-241ENST00000515749 HECW1Q76N89 1606 aa11.43□□□□□ -0.58
SEC31A-241ENST00000515749 KANK4Q5T7N3 995 aaPredicted RBP11.43□□□□□ -0.58
SEC31A-241ENST00000515749 SHROOM2Q13796 1616 aa11.4□□□□□ -0.58
SEC31A-241ENST00000515749 ATP1B4Q9UN42 357 aaPredicted RBP11.4□□□□□ -0.58
SEC31A-241ENST00000515749 LRRIQ1Q96JM4 1722 aa11.4□□□□□ -0.58
SEC31A-241ENST00000515749 TTBK1Q5TCY1 1321 aaPredicted RBP11.39□□□□□ -0.59
SEC31A-241ENST00000515749 RRBP1Q9P2E9 1410 aaKnown RBP11.39□□□□□ -0.59
SEC31A-241ENST00000515749 C19orf67A6NJJ6 358 aa11.38□□□□□ -0.59
SEC31A-241ENST00000515749 RAPGEF6Q8TEU7 1601 aa11.38□□□□□ -0.59
SEC31A-241ENST00000515749 EPRSP07814 1512 aaKnown RBP11.36□□□□□ -0.59
SEC31A-241ENST00000515749 EHBP1L1Q8N3D4 1523 aa11.36□□□□□ -0.59
SEC31A-241ENST00000515749 MTUS2Q5JR59 1369 aa11.36□□□□□ -0.59
SEC31A-241ENST00000515749 SUPT6HQ7KZ85 1726 aaKnown RBP11.35□□□□□ -0.59
SEC31A-241ENST00000515749 HRCP23327 699 aa11.35□□□□□ -0.59
SEC31A-241ENST00000515749 ZEB1P37275 1124 aaPredicted RBP11.35□□□□□ -0.59
SEC31A-241ENST00000515749 STAG3Q9UJ98 1225 aa11.35□□□□□ -0.59
SEC31A-241ENST00000515749 CDK11AQ9UQ88 783 aaPredicted RBP11.35□□□□□ -0.59
SEC31A-241ENST00000515749 CLASP1Q7Z460 1538 aa11.35□□□□□ -0.59
SEC31A-241ENST00000515749 PRG4Q92954 1404 aaPredicted RBP11.35□□□□□ -0.59
SEC31A-241ENST00000515749 CCNB3Q8WWL7 1395 aa11.34□□□□□ -0.59
SEC31A-241ENST00000515749 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.34□□□□□ -0.59
SEC31A-241ENST00000515749 FARP1Q9Y4F1 1045 aaPredicted RBP11.33□□□□□ -0.6
SEC31A-241ENST00000515749 ABCA8O94911 1581 aa11.32□□□□□ -0.6
SEC31A-241ENST00000515749 NUP153P49790 1475 aaKnown RBP11.32□□□□□ -0.6
SEC31A-241ENST00000515749 PTPRGP23470 1445 aa11.31□□□□□ -0.6
SEC31A-241ENST00000515749 CD44P16070 742 aaKnown RBP11.29□□□□□ -0.6
SEC31A-241ENST00000515749 ARHGEF11O15085 1522 aa11.29□□□□□ -0.6
SEC31A-241ENST00000515749 PHLDB1Q86UU1 1377 aa11.28□□□□□ -0.6
SEC31A-241ENST00000515749 NCOA2Q15596 1464 aa11.28□□□□□ -0.6
SEC31A-241ENST00000515749 PLB1Q6P1J6 1458 aa11.27□□□□□ -0.6
SEC31A-241ENST00000515749 CDK13Q14004 1512 aaKnown RBP11.27□□□□□ -0.61
SEC31A-241ENST00000515749 MYOM3Q5VTT5 1437 aa11.26□□□□□ -0.61
SEC31A-241ENST00000515749 CREBZFQ9NS37 354 aa11.26□□□□□ -0.61
SEC31A-241ENST00000515749 FGD6Q6ZV73 1430 aa11.26□□□□□ -0.61
SEC31A-241ENST00000515749 MIA2Q96PC5 1412 aa11.26□□□□□ -0.61
SEC31A-241ENST00000515749 MAGI3Q5TCQ9 1506 aa11.25□□□□□ -0.61
SEC31A-241ENST00000515749 TROQ12816 1431 aaPredicted RBP11.25□□□□□ -0.61
SEC31A-241ENST00000515749 UACAQ9BZF9 1416 aa11.25□□□□□ -0.61
SEC31A-241ENST00000515749 ADCY10Q96PN6 1610 aa11.24□□□□□ -0.61
SEC31A-241ENST00000515749 PLEKHD1A6NEE1 506 aa11.24□□□□□ -0.61
SEC31A-241ENST00000515749 GABBR2O75899 941 aa11.23□□□□□ -0.61
SEC31A-241ENST00000515749 UHRF1BP1LA0JNW5 1464 aa11.23□□□□□ -0.61
SEC31A-241ENST00000515749 ATP10BO94823 1461 aa11.23□□□□□ -0.61
SEC31A-241ENST00000515749 ABCC2Q92887 1545 aa11.22□□□□□ -0.61
SEC31A-241ENST00000515749 CCER1Q8TC90 406 aaPredicted RBP11.21□□□□□ -0.61
SEC31A-241ENST00000515749 ITSN2Q9NZM3 1697 aa11.2□□□□□ -0.62
SEC31A-241ENST00000515749 PTPN23Q9H3S7 1636 aa11.2□□□□□ -0.62
SEC31A-241ENST00000515749 TCOF1Q13428 1488 aaKnown RBP11.2□□□□□ -0.62
SEC31A-241ENST00000515749 FAM50AQ14320 339 aaKnown RBP11.2□□□□□ -0.62
SEC31A-241ENST00000515749 ERCC6L2Q5T890 1561 aa11.2□□□□□ -0.62
SEC31A-241ENST00000515749 CLSPNQ9HAW4 1339 aa11.18□□□□□ -0.62
SEC31A-241ENST00000515749 ACIN1Q9UKV3 1341 aaKnown RBP11.18□□□□□ -0.62
SEC31A-241ENST00000515749 KIF14Q15058 1648 aa11.18□□□□□ -0.62
SEC31A-241ENST00000515749 ARID3CA6NKF2 412 aa11.16□□□□□ -0.62
SEC31A-241ENST00000515749 ZRANB1Q9UGI0 708 aa11.16□□□□□ -0.62
SEC31A-241ENST00000515749 SETD5Q9C0A6 1442 aa11.16□□□□□ -0.62
SEC31A-241ENST00000515749 KDM5BQ9UGL1 1544 aa11.15□□□□□ -0.62
SEC31A-241ENST00000515749 GPATCH8Q9UKJ3 1502 aaKnown RBP11.14□□□□□ -0.63
SEC31A-241ENST00000515749 CDC42BPAQ5VT25 1732 aa11.13□□□□□ -0.63
SEC31A-241ENST00000515749 ITGAEP38570 1179 aa11.13□□□□□ -0.63
SEC31A-241ENST00000515749 ZCCHC11Q5TAX3 1644 aaKnown RBP11.13□□□□□ -0.63
SEC31A-241ENST00000515749 ABCC10Q5T3U5 1492 aa11.12□□□□□ -0.63
SEC31A-241ENST00000515749 AKNAQ7Z591 1439 aa11.12□□□□□ -0.63
SEC31A-241ENST00000515749 CFDP1Q9UEE9 299 aaPredicted RBP11.12□□□□□ -0.63
SEC31A-241ENST00000515749 HFM1A2PYH4 1435 aa11.1□□□□□ -0.63
SEC31A-241ENST00000515749 DNMT1P26358 1616 aaKnown RBP11.1□□□□□ -0.63
SEC31A-241ENST00000515749 PAK3O75914 559 aaPredicted RBP11.1□□□□□ -0.63
SEC31A-241ENST00000515749 RAB3GAP2Q9H2M9 1393 aa11.1□□□□□ -0.63
SEC31A-241ENST00000515749 ROCK1Q13464 1354 aa11.09□□□□□ -0.63
SEC31A-241ENST00000515749 NPM1P06748 294 aaKnown RBP eCLIP11.09□□□□□ -0.63
SEC31A-241ENST00000515749 RSPH4AQ5TD94 716 aa11.09□□□□□ -0.63
SEC31A-241ENST00000515749 PROM2Q8N271 834 aa11.09□□□□□ -0.63
SEC31A-241ENST00000515749 MYO5CQ9NQX4 1742 aa11.07□□□□□ -0.64
SEC31A-241ENST00000515749 DHX57Q6P158 1386 aaKnown RBP11.07□□□□□ -0.64
SEC31A-241ENST00000515749 PREX2Q70Z35 1606 aa11.07□□□□□ -0.64
SEC31A-241ENST00000515749 DAPK1P53355 1430 aa11.07□□□□□ -0.64
SEC31A-241ENST00000515749 PTPRKQ15262 1439 aa11.07□□□□□ -0.64
SEC31A-241ENST00000515749 GCC2Q8IWJ2 1684 aa11.07□□□□□ -0.64
SEC31A-241ENST00000515749 CDC42BPBQ9Y5S2 1711 aa11.06□□□□□ -0.64
SEC31A-241ENST00000515749 CAMSAP2Q08AD1 1489 aa11.06□□□□□ -0.64
SEC31A-241ENST00000515749 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.05□□□□□ -0.64
SEC31A-241ENST00000515749 ABCC5O15440 1437 aa11.05□□□□□ -0.64
SEC31A-241ENST00000515749 NAIPQ13075 1403 aa11.05□□□□□ -0.64
SEC31A-241ENST00000515749 ZNF579Q8NAF0 562 aaKnown RBP11.05□□□□□ -0.64
SEC31A-241ENST00000515749 PLEKHH2Q8IVE3 1493 aa11.05□□□□□ -0.64
SEC31A-241ENST00000515749 ADGBQ8N7X0 1667 aa11.04□□□□□ -0.64
SEC31A-241ENST00000515749 ARAP3Q8WWN8 1544 aa11.04□□□□□ -0.64
SEC31A-241ENST00000515749 ARHGEF5Q12774 1597 aa11.04□□□□□ -0.64
SEC31A-241ENST00000515749 FKBP8Q14318 412 aa11.04□□□□□ -0.64
SEC31A-241ENST00000515749 CROCC2H7BZ55 1655 aa11.04□□□□□ -0.64
SEC31A-241ENST00000515749 SHANK2Q9UPX8 1470 aa11.03□□□□□ -0.64
SEC31A-241ENST00000515749 WDR7Q9Y4E6 1490 aa11.03□□□□□ -0.64
SEC31A-241ENST00000515749 PLCH2O75038 1416 aa11.02□□□□□ -0.64
SEC31A-241ENST00000515749 KIAA1107Q9UPP5 1409 aa11.02□□□□□ -0.64
SEC31A-241ENST00000515749 ADGRL2O95490 1459 aa11.02□□□□□ -0.65
SEC31A-241ENST00000515749 MNX1P50219 401 aaPredicted RBP11.02□□□□□ -0.65
SEC31A-241ENST00000515749 PHF12Q96QT6 1004 aa11.02□□□□□ -0.65
SEC31A-241ENST00000515749 ZNF644Q9H582 1327 aaPredicted RBP11.02□□□□□ -0.65
SEC31A-241ENST00000515749 TTC37Q6PGP7 1564 aa11.02□□□□□ -0.65
SEC31A-241ENST00000515749 TSPY4P0CV99 314 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms