RNA–Protein interactions for RNA: ENST00000515621.5

NR1I3-234, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-234ENST00000515621 ARAP3Q8WWN8 1544 aa13.69□□□□□ -0.22
NR1I3-234ENST00000515621 GPATCH8Q9UKJ3 1502 aaKnown RBP13.69□□□□□ -0.22
NR1I3-234ENST00000515621 WDR7Q9Y4E6 1490 aa13.69□□□□□ -0.22
NR1I3-234ENST00000515621 AKNAQ7Z591 1439 aa13.68□□□□□ -0.22
NR1I3-234ENST00000515621 RIMBP3CA6NJZ7 1639 aa13.68□□□□□ -0.22
NR1I3-234ENST00000515621 RIMBP3BA6NNM3 1639 aa13.68□□□□□ -0.22
NR1I3-234ENST00000515621 RIMBP3Q9UFD9 1639 aa13.68□□□□□ -0.22
NR1I3-234ENST00000515621 HOXD11P31277 338 aaPredicted RBP13.67□□□□□ -0.22
NR1I3-234ENST00000515621 PREX2Q70Z35 1606 aa13.67□□□□□ -0.22
NR1I3-234ENST00000515621 ARID3CA6NKF2 412 aa13.66□□□□□ -0.22
NR1I3-234ENST00000515621 ACIN1Q9UKV3 1341 aaKnown RBP13.64□□□□□ -0.23
NR1I3-234ENST00000515621 MAPKBP1O60336 1514 aa13.64□□□□□ -0.23
NR1I3-234ENST00000515621 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.64□□□□□ -0.23
NR1I3-234ENST00000515621 CDC42BPAQ5VT25 1732 aa13.64□□□□□ -0.23
NR1I3-234ENST00000515621 PLEKHH2Q8IVE3 1493 aa13.64□□□□□ -0.23
NR1I3-234ENST00000515621 HRCP23327 699 aa13.64□□□□□ -0.23
NR1I3-234ENST00000515621 CAMSAP2Q08AD1 1489 aa13.63□□□□□ -0.23
NR1I3-234ENST00000515621 NPM1P06748 294 aaKnown RBP eCLIP13.63□□□□□ -0.23
NR1I3-234ENST00000515621 DNMT1P26358 1616 aaKnown RBP13.63□□□□□ -0.23
NR1I3-234ENST00000515621 ASXL2Q76L83 1435 aa13.63□□□□□ -0.23
NR1I3-234ENST00000515621 ABCA9Q8IUA7 1624 aa13.62□□□□□ -0.23
NR1I3-234ENST00000515621 FAM50AQ14320 339 aaKnown RBP13.62□□□□□ -0.23
NR1I3-234ENST00000515621 CFDP1Q9UEE9 299 aaPredicted RBP13.62□□□□□ -0.23
NR1I3-234ENST00000515621 HFM1A2PYH4 1435 aa13.62□□□□□ -0.23
NR1I3-234ENST00000515621 TTC37Q6PGP7 1564 aa13.62□□□□□ -0.23
NR1I3-234ENST00000515621 MYO5CQ9NQX4 1742 aa13.61□□□□□ -0.23
NR1I3-234ENST00000515621 SHANK2Q9UPX8 1470 aa13.61□□□□□ -0.23
NR1I3-234ENST00000515621 ROCK1Q13464 1354 aa13.61□□□□□ -0.23
NR1I3-234ENST00000515621 PLCH2O75038 1416 aa13.61□□□□□ -0.23
NR1I3-234ENST00000515621 ARHGEF5Q12774 1597 aa13.61□□□□□ -0.23
NR1I3-234ENST00000515621 KIAA1107Q9UPP5 1409 aa13.6□□□□□ -0.23
NR1I3-234ENST00000515621 DAPK1P53355 1430 aa13.59□□□□□ -0.23
NR1I3-234ENST00000515621 RSPH4AQ5TD94 716 aa13.59□□□□□ -0.23
NR1I3-234ENST00000515621 SETD5Q9C0A6 1442 aa13.58□□□□□ -0.24
NR1I3-234ENST00000515621 ADGRL2O95490 1459 aa13.57□□□□□ -0.24
NR1I3-234ENST00000515621 CDC42BPBQ9Y5S2 1711 aa13.57□□□□□ -0.24
NR1I3-234ENST00000515621 ZEB1P37275 1124 aaPredicted RBP13.57□□□□□ -0.24
NR1I3-234ENST00000515621 CLSPNQ9HAW4 1339 aa13.57□□□□□ -0.24
NR1I3-234ENST00000515621 CROCC2H7BZ55 1655 aa13.56□□□□□ -0.24
NR1I3-234ENST00000515621 ABCC5O15440 1437 aa13.56□□□□□ -0.24
NR1I3-234ENST00000515621 ARHGAP5Q13017 1502 aa13.55□□□□□ -0.24
NR1I3-234ENST00000515621 SAMD9LQ8IVG5 1584 aa13.55□□□□□ -0.24
NR1I3-234ENST00000515621 GCC2Q8IWJ2 1684 aa13.55□□□□□ -0.24
NR1I3-234ENST00000515621 PTPRKQ15262 1439 aa13.55□□□□□ -0.24
NR1I3-234ENST00000515621 GLI2P10070 1586 aa13.54□□□□□ -0.24
NR1I3-234ENST00000515621 CFAP74Q9C0B2 1584 aa13.54□□□□□ -0.24
NR1I3-234ENST00000515621 CCDC141Q6ZP82 1450 aa13.54□□□□□ -0.24
NR1I3-234ENST00000515621 MBD5Q9P267 1494 aa13.54□□□□□ -0.24
NR1I3-234ENST00000515621 EFCAB2Q5VUJ9 269 aa13.53□□□□□ -0.24
NR1I3-234ENST00000515621 NAIPQ13075 1403 aa13.53□□□□□ -0.24
NR1I3-234ENST00000515621 MAST1Q9Y2H9 1570 aa13.53□□□□□ -0.24
NR1I3-234ENST00000515621 ADGBQ8N7X0 1667 aa13.53□□□□□ -0.24
NR1I3-234ENST00000515621 ABCC1P33527 1531 aa13.52□□□□□ -0.25
NR1I3-234ENST00000515621 RAB3GAP2Q9H2M9 1393 aa13.51□□□□□ -0.25
NR1I3-234ENST00000515621 ANKRD30AQ9BXX3 1397 aa13.49□□□□□ -0.25
NR1I3-234ENST00000515621 ZNF644Q9H582 1327 aaPredicted RBP13.49□□□□□ -0.25
NR1I3-234ENST00000515621 CYB5RLQ6IPT4 315 aa13.49□□□□□ -0.25
NR1I3-234ENST00000515621 SYCP2Q9BX26 1530 aa13.49□□□□□ -0.25
NR1I3-234ENST00000515621 FANCAO15360 1455 aa13.48□□□□□ -0.25
NR1I3-234ENST00000515621 NCOA1Q15788 1441 aa13.48□□□□□ -0.25
NR1I3-234ENST00000515621 ITGAEP38570 1179 aa13.48□□□□□ -0.25
NR1I3-234ENST00000515621 KCNH8Q96L42 1107 aa13.48□□□□□ -0.25
NR1I3-234ENST00000515621 NEO1Q92859 1461 aa13.48□□□□□ -0.25
NR1I3-234ENST00000515621 C9orf84Q5VXU9 1444 aa13.47□□□□□ -0.25
NR1I3-234ENST00000515621 PLXNC1O60486 1568 aa13.47□□□□□ -0.25
NR1I3-234ENST00000515621 RTEL1-TNFRSF6BF6WH68 1400 aa13.47□□□□□ -0.25
NR1I3-234ENST00000515621 CCER1Q8TC90 406 aaPredicted RBP13.46□□□□□ -0.25
NR1I3-234ENST00000515621 CD109Q6YHK3 1445 aa13.46□□□□□ -0.26
NR1I3-234ENST00000515621 MAP3K4Q9Y6R4 1608 aa13.46□□□□□ -0.26
NR1I3-234ENST00000515621 DHX57Q6P158 1386 aaKnown RBP13.45□□□□□ -0.26
NR1I3-234ENST00000515621 TSPY4P0CV99 314 aa13.45□□□□□ -0.26
NR1I3-234ENST00000515621 TSPY10P0CW01 314 aa13.45□□□□□ -0.26
NR1I3-234ENST00000515621 ZNF777Q9ULD5 760 aaPredicted RBP13.45□□□□□ -0.26
NR1I3-234ENST00000515621 DIP2BQ9P265 1576 aa13.44□□□□□ -0.26
NR1I3-234ENST00000515621 ARHGEF12Q9NZN5 1544 aa13.42□□□□□ -0.26
NR1I3-234ENST00000515621 ADGRL1O94910 1474 aa13.42□□□□□ -0.26
NR1I3-234ENST00000515621 ZNF518AQ6AHZ1 1483 aa13.42□□□□□ -0.26
NR1I3-234ENST00000515621 SLC4A2P04920 1241 aa13.4□□□□□ -0.26
NR1I3-234ENST00000515621 ANKRD50Q9ULJ7 1429 aa13.39□□□□□ -0.27
NR1I3-234ENST00000515621 HNRNPMP52272 730 aaKnown RBP eCLIP13.39□□□□□ -0.27
NR1I3-234ENST00000515621 KIF15Q9NS87 1388 aa13.39□□□□□ -0.27
NR1I3-234ENST00000515621 TEX14Q8IWB6 1497 aa13.39□□□□□ -0.27
NR1I3-234ENST00000515621 KDM5CP41229 1560 aa13.39□□□□□ -0.27
NR1I3-234ENST00000515621 INO80Q9ULG1 1556 aaPredicted RBP13.39□□□□□ -0.27
NR1I3-234ENST00000515621 ZFYVE16Q7Z3T8 1539 aa13.39□□□□□ -0.27
NR1I3-234ENST00000515621 DUOX2Q9NRD8 1548 aa13.39□□□□□ -0.27
NR1I3-234ENST00000515621 ERBINQ96RT1 1412 aa13.39□□□□□ -0.27
NR1I3-234ENST00000515621 KDM5DQ9BY66 1539 aa13.38□□□□□ -0.27
NR1I3-234ENST00000515621 POGZQ7Z3K3 1410 aa13.38□□□□□ -0.27
NR1I3-234ENST00000515621 SCAPERQ9BY12 1400 aa13.38□□□□□ -0.27
NR1I3-234ENST00000515621 CHIC2Q9UKJ5 165 aa13.37□□□□□ -0.27
NR1I3-234ENST00000515621 TRAPPC8Q9Y2L5 1435 aa13.37□□□□□ -0.27
NR1I3-234ENST00000515621 RRP7BPQ9NSQ0 103 aa13.36□□□□□ -0.27
NR1I3-234ENST00000515621 MLH3Q9UHC1 1453 aa13.36□□□□□ -0.27
NR1I3-234ENST00000515621 ATP7AQ04656 1500 aa13.35□□□□□ -0.27
NR1I3-234ENST00000515621 MYCNP04198 464 aaPredicted RBP13.34□□□□□ -0.27
NR1I3-234ENST00000515621 SPAG9O60271 1321 aaKnown RBP13.34□□□□□ -0.27
NR1I3-234ENST00000515621 KDM6BO15054 1643 aa13.33□□□□□ -0.28
NR1I3-234ENST00000515621 DENND4BO75064 1496 aaPredicted RBP13.33□□□□□ -0.28
NR1I3-234ENST00000515621 MAGI2Q86UL8 1455 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms