RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 ZMYM4Q5VZL5 1548 aa39.27■■■■□ 3.88
SNF8-213ENST00000514929 ARHGEF40Q8TER5 1519 aa39.26■■■■□ 3.88
SNF8-213ENST00000514929 POGZQ7Z3K3 1410 aa39.26■■■■□ 3.88
SNF8-213ENST00000514929 CDC42BPBQ9Y5S2 1711 aa39.21■■■■□ 3.87
SNF8-213ENST00000514929 PREX2Q70Z35 1606 aa39.21■■■■□ 3.87
SNF8-213ENST00000514929 ARID4BQ4LE39 1312 aaPredicted RBP39.2■■■■□ 3.87
SNF8-213ENST00000514929 ZFYVE16Q7Z3T8 1539 aa39.19■■■■□ 3.86
SNF8-213ENST00000514929 MAGI2Q86UL8 1455 aa39.19■■■■□ 3.86
SNF8-213ENST00000514929 YEATS2Q9ULM3 1422 aa39.15■■■■□ 3.86
SNF8-213ENST00000514929 MTUS2Q5JR59 1369 aa39.14■■■■□ 3.86
SNF8-213ENST00000514929 CDC42BPAQ5VT25 1732 aa39.13■■■■□ 3.85
SNF8-213ENST00000514929 ZNF518AQ6AHZ1 1483 aa39.11■■■■□ 3.85
SNF8-213ENST00000514929 BCORL1Q5H9F3 1711 aa39.09■■■■□ 3.85
SNF8-213ENST00000514929 ADAMTSL3P82987 1691 aa39.08■■■■□ 3.85
SNF8-213ENST00000514929 AFAP1Q8N556 730 aa39.06■■■■□ 3.84
SNF8-213ENST00000514929 ABCC1P33527 1531 aa39.04■■■■□ 3.84
SNF8-213ENST00000514929 GPATCH8Q9UKJ3 1502 aaKnown RBP39.04■■■■□ 3.84
SNF8-213ENST00000514929 KDM5CP41229 1560 aa39.02■■■■□ 3.84
SNF8-213ENST00000514929 EHBP1L1Q8N3D4 1523 aa39.01■■■■□ 3.84
SNF8-213ENST00000514929 MYT1LQ9UL68 1186 aa39.01■■■■□ 3.84
SNF8-213ENST00000514929 ZNF777Q9ULD5 760 aaPredicted RBP39.01■■■■□ 3.84
SNF8-213ENST00000514929 CCNB3Q8WWL7 1395 aa39■■■■□ 3.83
SNF8-213ENST00000514929 ATP10AO60312 1499 aa38.98■■■■□ 3.83
SNF8-213ENST00000514929 ITSN2Q9NZM3 1697 aa38.98■■■■□ 3.83
SNF8-213ENST00000514929 ARHGEF12Q9NZN5 1544 aa38.98■■■■□ 3.83
SNF8-213ENST00000514929 VPS8Q8N3P4 1428 aa38.97■■■■□ 3.83
SNF8-213ENST00000514929 MADDQ8WXG6 1647 aa38.96■■■■□ 3.83
SNF8-213ENST00000514929 TRAPPC8Q9Y2L5 1435 aa38.96■■■■□ 3.83
SNF8-213ENST00000514929 HECW2Q9P2P5 1572 aa38.95■■■■□ 3.83
SNF8-213ENST00000514929 SIGLEC1Q9BZZ2 1709 aa38.95■■■■□ 3.83
SNF8-213ENST00000514929 PTPRMP28827 1452 aa38.95■■■■□ 3.83
SNF8-213ENST00000514929 CFDP1Q9UEE9 299 aaPredicted RBP38.94■■■■□ 3.82
SNF8-213ENST00000514929 C9orf84Q5VXU9 1444 aa38.94■■■■□ 3.82
SNF8-213ENST00000514929 SAMD9LQ8IVG5 1584 aa38.93■■■■□ 3.82
SNF8-213ENST00000514929 MLH3Q9UHC1 1453 aa38.89■■■■□ 3.82
SNF8-213ENST00000514929 TIAM1Q13009 1591 aa38.87■■■■□ 3.81
SNF8-213ENST00000514929 MLECQ14165 292 aa38.87■■■■□ 3.81
SNF8-213ENST00000514929 SYCP2Q9BX26 1530 aa38.86■■■■□ 3.81
SNF8-213ENST00000514929 DIP2CQ9Y2E4 1556 aa38.85■■■■□ 3.81
SNF8-213ENST00000514929 RIMS1Q86UR5 1692 aaKnown RBP38.84■■■■□ 3.81
SNF8-213ENST00000514929 PLEKHH2Q8IVE3 1493 aa38.84■■■■□ 3.81
SNF8-213ENST00000514929 HNRNPMP52272 730 aaKnown RBP eCLIP38.82■■■■□ 3.8
SNF8-213ENST00000514929 ABCA6Q8N139 1617 aa38.81■■■■□ 3.8
SNF8-213ENST00000514929 SUPT6HQ7KZ85 1726 aaKnown RBP38.8■■■■□ 3.8
SNF8-213ENST00000514929 KIAA1107Q9UPP5 1409 aa38.8■■■■□ 3.8
SNF8-213ENST00000514929 NCOA2Q15596 1464 aa38.77■■■■□ 3.8
SNF8-213ENST00000514929 KIDINS220Q9ULH0 1771 aa38.76■■■■□ 3.8
SNF8-213ENST00000514929 REREQ9P2R6 1566 aa38.75■■■■□ 3.79
SNF8-213ENST00000514929 FER1L4A9Z1Z3 1794 aa38.73■■■■□ 3.79
SNF8-213ENST00000514929 SPAG9O60271 1321 aaKnown RBP38.73■■■■□ 3.79
SNF8-213ENST00000514929 LRRC9Q6ZRR7 1453 aa38.72■■■■□ 3.79
SNF8-213ENST00000514929 ZNF644Q9H582 1327 aaPredicted RBP38.7■■■■□ 3.79
SNF8-213ENST00000514929 PLPPR3Q6T4P5 718 aa38.69■■■■□ 3.78
SNF8-213ENST00000514929 MAP3K1Q13233 1512 aa38.68■■■■□ 3.78
SNF8-213ENST00000514929 ATP7AQ04656 1500 aa38.63■■■■□ 3.78
SNF8-213ENST00000514929 AGLP35573 1532 aa38.63■■■■□ 3.77
SNF8-213ENST00000514929 KANK4Q5T7N3 995 aaPredicted RBP38.6■■■■□ 3.77
SNF8-213ENST00000514929 INO80Q9ULG1 1556 aaPredicted RBP38.6■■■■□ 3.77
SNF8-213ENST00000514929 MBD5Q9P267 1494 aa38.59■■■■□ 3.77
SNF8-213ENST00000514929 APLP2Q06481 763 aa38.57■■■■□ 3.76
SNF8-213ENST00000514929 CAMSAP2Q08AD1 1489 aa38.55■■■■□ 3.76
SNF8-213ENST00000514929 ESF1Q9H501 851 aaKnown RBP38.51■■■■□ 3.76
SNF8-213ENST00000514929 A2MP01023 1474 aa38.48■■■■□ 3.75
SNF8-213ENST00000514929 LMTK3Q96Q04 1460 aa38.48■■■■□ 3.75
SNF8-213ENST00000514929 CCDC141Q6ZP82 1450 aa38.47■■■■□ 3.75
SNF8-213ENST00000514929 CEBPAP49715 358 aaPredicted RBP38.46■■■■□ 3.75
SNF8-213ENST00000514929 RSPH4AQ5TD94 716 aa38.45■■■■□ 3.75
SNF8-213ENST00000514929 RTEL1-TNFRSF6BF6WH68 1400 aa38.45■■■■□ 3.75
SNF8-213ENST00000514929 PLXNC1O60486 1568 aa38.44■■■■□ 3.74
SNF8-213ENST00000514929 ADGBQ8N7X0 1667 aa38.43■■■■□ 3.74
SNF8-213ENST00000514929 MYOM3Q5VTT5 1437 aa38.4■■■■□ 3.74
SNF8-213ENST00000514929 ARHGEF5Q12774 1597 aa38.39■■■■□ 3.74
SNF8-213ENST00000514929 MIA2Q96PC5 1412 aa38.37■■■■□ 3.73
SNF8-213ENST00000514929 CNTLNQ9NXG0 1405 aa38.37■■■■□ 3.73
SNF8-213ENST00000514929 C3P01024 1663 aa38.34■■■■□ 3.73
SNF8-213ENST00000514929 TSPY4P0CV99 314 aa38.34■■■■□ 3.73
SNF8-213ENST00000514929 TSPY10P0CW01 314 aa38.34■■■■□ 3.73
SNF8-213ENST00000514929 HSPA2P54652 639 aa38.32■■■■□ 3.72
SNF8-213ENST00000514929 PREX1Q8TCU6 1659 aa38.31■■■■□ 3.72
SNF8-213ENST00000514929 GGT6Q6P531 493 aa38.3■■■■□ 3.72
SNF8-213ENST00000514929 DHX29Q7Z478 1369 aaKnown RBP38.3■■■■□ 3.72
SNF8-213ENST00000514929 MROH2AA6NES4 1674 aa38.24■■■■□ 3.71
SNF8-213ENST00000514929 UHRF1BP1Q6BDS2 1440 aa38.22■■■■□ 3.71
SNF8-213ENST00000514929 CLTCQ00610 1675 aaKnown RBP38.21■■■■□ 3.71
SNF8-213ENST00000514929 SETD1BQ9UPS6 1966 aaKnown RBP38.2■■■■□ 3.71
SNF8-213ENST00000514929 ZMYM3Q14202 1370 aa38.19■■■■□ 3.7
SNF8-213ENST00000514929 MAST1Q9Y2H9 1570 aa38.19■■■■□ 3.7
SNF8-213ENST00000514929 KIF3BO15066 747 aa38.18■■■■□ 3.7
SNF8-213ENST00000514929 PPP6R1Q9UPN7 881 aa38.18■■■■□ 3.7
SNF8-213ENST00000514929 PTPN23Q9H3S7 1636 aa38.16■■■■□ 3.7
SNF8-213ENST00000514929 FGD6Q6ZV73 1430 aa38.12■■■■□ 3.69
SNF8-213ENST00000514929 NPATQ14207 1427 aa38.11■■■■□ 3.69
SNF8-213ENST00000514929 TCOF1Q13428 1488 aaKnown RBP38.04■■■■□ 3.68
SNF8-213ENST00000514929 ABCC5O15440 1437 aa38.04■■■■□ 3.68
SNF8-213ENST00000514929 CROCC2H7BZ55 1655 aa38.01■■■■□ 3.68
SNF8-213ENST00000514929 SHANK2Q9UPX8 1470 aa38.01■■■■□ 3.67
SNF8-213ENST00000514929 PTPRKQ15262 1439 aa38■■■■□ 3.67
SNF8-213ENST00000514929 KDM5DQ9BY66 1539 aa38■■■■□ 3.67
SNF8-213ENST00000514929 FAM135AQ9P2D6 1515 aa38■■■■□ 3.67
SNF8-213ENST00000514929 DAPK1P53355 1430 aa37.99■■■■□ 3.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms