RNA–Protein interactions for RNA: ENST00000514404.1

AC008560.1-202, humanhuman

APPRIS ALT2 TSL 4

Gene AC008560.1, Length 332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008560.1-202ENST00000514404 NLRP6P59044 892 aa5.5□□□□□ -1.53
AC008560.1-202ENST00000514404 HOXB3P14651 431 aaPredicted RBP5.49□□□□□ -1.53
AC008560.1-202ENST00000514404 TAOK2Q9UL54 1235 aa5.49□□□□□ -1.53
AC008560.1-202ENST00000514404 POTEB3A0JP26 581 aa5.48□□□□□ -1.53
AC008560.1-202ENST00000514404 POTEBQ6S5H4 581 aa5.48□□□□□ -1.53
AC008560.1-202ENST00000514404 HS6ST3Q8IZP7 471 aa5.48□□□□□ -1.53
AC008560.1-202ENST00000514404 KRTAP3-3Q9BYR6 98 aa5.47□□□□□ -1.53
AC008560.1-202ENST00000514404 KRTAP3-2Q9BYR7 98 aa5.47□□□□□ -1.53
AC008560.1-202ENST00000514404 ZNF710Q8N1W2 664 aa5.46□□□□□ -1.54
AC008560.1-202ENST00000514404 ERBB3P21860 1342 aa5.44□□□□□ -1.54
AC008560.1-202ENST00000514404 C2orf72A6NCS6 295 aa5.43□□□□□ -1.54
AC008560.1-202ENST00000514404 KIF3CO14782 793 aa5.43□□□□□ -1.54
AC008560.1-202ENST00000514404 RTN4Q9NQC3 1192 aaKnown RBP5.42□□□□□ -1.54
AC008560.1-202ENST00000514404 DCAF8L2P0C7V8 631 aa5.41□□□□□ -1.54
AC008560.1-202ENST00000514404 DOK7Q18PE1 504 aa5.41□□□□□ -1.54
AC008560.1-202ENST00000514404 KHSRPQ92945 711 aaKnown RBP eCLIP5.41□□□□□ -1.54
AC008560.1-202ENST00000514404 DNAJC5Q9H3Z4 198 aa5.41□□□□□ -1.54
AC008560.1-202ENST00000514404 RNF166Q96A37 237 aaPredicted RBP5.4□□□□□ -1.54
AC008560.1-202ENST00000514404 RIMBP2O15034 1052 aa5.39□□□□□ -1.55
AC008560.1-202ENST00000514404 GTPBP6O43824 516 aaPredicted RBP5.39□□□□□ -1.55
AC008560.1-202ENST00000514404 HOXB1P14653 301 aaPredicted RBP5.39□□□□□ -1.55
AC008560.1-202ENST00000514404 GPR153Q6NV75 609 aa5.39□□□□□ -1.55
AC008560.1-202ENST00000514404 ARSIQ5FYB1 569 aa5.38□□□□□ -1.55
AC008560.1-202ENST00000514404 VARS2Q5ST30 1063 aaKnown RBP5.38□□□□□ -1.55
AC008560.1-202ENST00000514404 MYT1LQ9UL68 1186 aa5.36□□□□□ -1.55
AC008560.1-202ENST00000514404 NCKAP5LQ9HCH0 1330 aa5.34□□□□□ -1.55
AC008560.1-202ENST00000514404 DSG2Q14126 1118 aa5.34□□□□□ -1.55
AC008560.1-202ENST00000514404 TMC2Q8TDI7 906 aa5.34□□□□□ -1.55
AC008560.1-202ENST00000514404 GPHNQ9NQX3 736 aaPredicted RBP5.34□□□□□ -1.55
AC008560.1-202ENST00000514404 CADPS2Q86UW7 1296 aa5.33□□□□□ -1.56
AC008560.1-202ENST00000514404 NUDT7P0C024 238 aa5.32□□□□□ -1.56
AC008560.1-202ENST00000514404 FOXK1P85037 733 aa5.32□□□□□ -1.56
AC008560.1-202ENST00000514404 AMER1Q5JTC6 1135 aaPredicted RBP5.32□□□□□ -1.56
AC008560.1-202ENST00000514404 ANKRD13DQ6ZTN6 518 aa5.32□□□□□ -1.56
AC008560.1-202ENST00000514404 PLPP6Q8IY26 295 aa5.32□□□□□ -1.56
AC008560.1-202ENST00000514404 PCDHGA4Q9Y5G9 962 aa5.32□□□□□ -1.56
AC008560.1-202ENST00000514404 CRISPLD2Q9H0B8 497 aa5.31□□□□□ -1.56
AC008560.1-202ENST00000514404 ZSWIM6Q9HCJ5 1215 aa5.31□□□□□ -1.56
AC008560.1-202ENST00000514404 KDM4FA0A1W2PPD8 638 aa5.3□□□□□ -1.56
AC008560.1-202ENST00000514404 SLC34A2O95436 690 aa5.3□□□□□ -1.56
AC008560.1-202ENST00000514404 ZNF687Q8N1G0 1237 aa5.3□□□□□ -1.56
AC008560.1-202ENST00000514404 LHX6Q9UPM6 363 aa5.29□□□□□ -1.56
AC008560.1-202ENST00000514404 ZNF316A6NFI3 1004 aaPredicted RBP5.28□□□□□ -1.56
AC008560.1-202ENST00000514404 PTGER2P43116 358 aa5.28□□□□□ -1.56
AC008560.1-202ENST00000514404 POTEEQ6S8J3 1075 aa5.28□□□□□ -1.56
AC008560.1-202ENST00000514404 PTCD2Q8WV60 388 aaKnown RBP5.28□□□□□ -1.56
AC008560.1-202ENST00000514404 BBXQ8WY36 941 aaPredicted RBP5.27□□□□□ -1.57
AC008560.1-202ENST00000514404 PPP1R15BQ5SWA1 713 aa5.26□□□□□ -1.57
AC008560.1-202ENST00000514404 UPF1Q92900 1129 aaKnown RBP eCLIP5.26□□□□□ -1.57
AC008560.1-202ENST00000514404 LARP6Q9BRS8 491 aaKnown RBP5.26□□□□□ -1.57
AC008560.1-202ENST00000514404 RYDENQ9NUL5 291 aaKnown RBP5.26□□□□□ -1.57
AC008560.1-202ENST00000514404 AXIN2Q9Y2T1 843 aa5.26□□□□□ -1.57
AC008560.1-202ENST00000514404 OXER1Q8TDS5 423 aa5.25□□□□□ -1.57
AC008560.1-202ENST00000514404 PDE4AP27815 886 aa5.24□□□□□ -1.57
AC008560.1-202ENST00000514404 EMILIN3Q9NT22 766 aa5.24□□□□□ -1.57
AC008560.1-202ENST00000514404 MFSD10Q14728 455 aa5.23□□□□□ -1.57
AC008560.1-202ENST00000514404 LSM11P83369 360 aaKnown RBP eCLIP5.22□□□□□ -1.57
AC008560.1-202ENST00000514404 PAXIP1Q6ZW49 1069 aaPredicted RBP5.22□□□□□ -1.57
AC008560.1-202ENST00000514404 DDX27Q96GQ7 796 aaKnown RBP5.22□□□□□ -1.57
AC008560.1-202ENST00000514404 SPRYD3Q8NCJ5 442 aa5.21□□□□□ -1.58
AC008560.1-202ENST00000514404 CFAP44Q96MT7 982 aa5.21□□□□□ -1.58
AC008560.1-202ENST00000514404 PLA2G2EQ9NZK7 142 aa5.21□□□□□ -1.58
AC008560.1-202ENST00000514404 PSEN2P49810 448 aa5.2□□□□□ -1.58
AC008560.1-202ENST00000514404 DMRTA1Q5VZB9 504 aa5.19□□□□□ -1.58
AC008560.1-202ENST00000514404 HCSTQ9UBK5 93 aa5.18□□□□□ -1.58
AC008560.1-202ENST00000514404 TBC1D12O60347 775 aa5.17□□□□□ -1.58
AC008560.1-202ENST00000514404 EVI5O60447 810 aa5.17□□□□□ -1.58
AC008560.1-202ENST00000514404 ANO8Q9HCE9 1232 aaPredicted RBP5.17□□□□□ -1.58
AC008560.1-202ENST00000514404 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.17□□□□□ -1.58
AC008560.1-202ENST00000514404 PBX2P40425 430 aa5.16□□□□□ -1.58
AC008560.1-202ENST00000514404 CAMK2BQ13554 666 aa5.16□□□□□ -1.58
AC008560.1-202ENST00000514404 ZNF454Q8N9F8 522 aa5.16□□□□□ -1.58
AC008560.1-202ENST00000514404 DPYSL4O14531 572 aa5.15□□□□□ -1.59
AC008560.1-202ENST00000514404 ARHGAP33O14559 1287 aa5.15□□□□□ -1.59
AC008560.1-202ENST00000514404 FOSBP53539 338 aa5.15□□□□□ -1.59
AC008560.1-202ENST00000514404 MAP3K9P80192 1104 aa5.15□□□□□ -1.59
AC008560.1-202ENST00000514404 TSHZ2Q9NRE2 1034 aa5.15□□□□□ -1.59
AC008560.1-202ENST00000514404 KCNK17Q96T54 332 aa5.14□□□□□ -1.59
AC008560.1-202ENST00000514404 ADAM33Q9BZ11 813 aa5.14□□□□□ -1.59
AC008560.1-202ENST00000514404 PPP4R3BQ5MIZ7 849 aa5.13□□□□□ -1.59
AC008560.1-202ENST00000514404 ADGRD1Q6QNK2 874 aa5.13□□□□□ -1.59
AC008560.1-202ENST00000514404 STAC3Q96MF2 364 aa5.13□□□□□ -1.59
AC008560.1-202ENST00000514404 PCDHGA10Q9Y5H3 936 aa5.13□□□□□ -1.59
AC008560.1-202ENST00000514404 PSDA5PKW4 1024 aaPredicted RBP5.12□□□□□ -1.59
AC008560.1-202ENST00000514404 HRO43593 1189 aa5.11□□□□□ -1.59
AC008560.1-202ENST00000514404 JPH4Q96JJ6 628 aa5.11□□□□□ -1.59
AC008560.1-202ENST00000514404 BCL2L12Q9HB09 334 aa5.11□□□□□ -1.59
AC008560.1-202ENST00000514404 COL9A1P20849 921 aa5.1□□□□□ -1.59
AC008560.1-202ENST00000514404 PRIM1P49642 420 aaKnown RBP5.1□□□□□ -1.59
AC008560.1-202ENST00000514404 ZDHHC16Q969W1 377 aa5.1□□□□□ -1.59
AC008560.1-202ENST00000514404 KCTD12Q96CX2 325 aaKnown RBP5.1□□□□□ -1.59
AC008560.1-202ENST00000514404 DDX12PQ92771 950 aa5.09□□□□□ -1.59
AC008560.1-202ENST00000514404 VPS9D1Q9Y2B5 631 aa5.09□□□□□ -1.59
AC008560.1-202ENST00000514404 E2F4Q16254 413 aa5.08□□□□□ -1.6
AC008560.1-202ENST00000514404 ZBED2Q9BTP6 218 aa5.08□□□□□ -1.6
AC008560.1-202ENST00000514404 TK2O00142 265 aa5.07□□□□□ -1.6
AC008560.1-202ENST00000514404 PTPREP23469 700 aa5.07□□□□□ -1.6
AC008560.1-202ENST00000514404 PDIA6Q15084 440 aa5.07□□□□□ -1.6
AC008560.1-202ENST00000514404 PROX2Q3B8N5 592 aa5.07□□□□□ -1.6
AC008560.1-202ENST00000514404 BHMG1C9JSJ3 638 aaPredicted RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms