RNA–Protein interactions for RNA: ENST00000514189.5

PRDM16-208, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM16, Length 4,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-208ENST00000514189 SLC4A3P48751 1232 aa16.98■□□□□ 0.31
PRDM16-208ENST00000514189 FGD5Q6ZNL6 1462 aa16.98■□□□□ 0.31
PRDM16-208ENST00000514189 SLKQ9H2G2 1235 aaPredicted RBP16.97■□□□□ 0.31
PRDM16-208ENST00000514189 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.95■□□□□ 0.3
PRDM16-208ENST00000514189 ARID4BQ4LE39 1312 aaPredicted RBP16.95■□□□□ 0.3
PRDM16-208ENST00000514189 TMF1P82094 1093 aa16.94■□□□□ 0.3
PRDM16-208ENST00000514189 CCDC146Q8IYE0 955 aa16.94■□□□□ 0.3
PRDM16-208ENST00000514189 CLUAP1Q96AJ1 413 aa16.94■□□□□ 0.3
PRDM16-208ENST00000514189 ST20-MTHFSA0A0A6YYL1 179 aa16.94■□□□□ 0.3
PRDM16-208ENST00000514189 RAD54L2Q9Y4B4 1467 aa16.93■□□□□ 0.3
PRDM16-208ENST00000514189 MYH16Q9H6N6 1097 aa16.93■□□□□ 0.3
PRDM16-208ENST00000514189 NUP155O75694 1391 aa16.93■□□□□ 0.3
PRDM16-208ENST00000514189 CFAP53Q96M91 514 aa16.93■□□□□ 0.3
PRDM16-208ENST00000514189 HNRNPMP52272 730 aaKnown RBP eCLIP16.92■□□□□ 0.3
PRDM16-208ENST00000514189 PRKRIP1Q9H875 184 aaPredicted RBP16.92■□□□□ 0.3
PRDM16-208ENST00000514189 GZF1Q9H116 711 aaPredicted RBP16.91■□□□□ 0.3
PRDM16-208ENST00000514189 STK26Q9P289 416 aa16.91■□□□□ 0.3
PRDM16-208ENST00000514189 TRIM44Q96DX7 344 aaPredicted RBP16.9■□□□□ 0.3
PRDM16-208ENST00000514189 CDCA8Q53HL2 280 aa16.9■□□□□ 0.3
PRDM16-208ENST00000514189 SYNJ1O43426 1573 aa16.9■□□□□ 0.3
PRDM16-208ENST00000514189 APBB1O00213 710 aa16.9■□□□□ 0.3
PRDM16-208ENST00000514189 NUDCQ9Y266 331 aa16.89■□□□□ 0.29
PRDM16-208ENST00000514189 NUTM2DQ5VT03 806 aaPredicted RBP16.89■□□□□ 0.29
PRDM16-208ENST00000514189 GGT6Q6P531 493 aa16.89■□□□□ 0.29
PRDM16-208ENST00000514189 EXOC6Q8TAG9 804 aa16.88■□□□□ 0.29
PRDM16-208ENST00000514189 POGKQ9P215 609 aa16.88■□□□□ 0.29
PRDM16-208ENST00000514189 IGF1RP08069 1367 aa16.87■□□□□ 0.29
PRDM16-208ENST00000514189 MAPK8IP3Q9UPT6 1336 aa16.87■□□□□ 0.29
PRDM16-208ENST00000514189 TAOK2Q9UL54 1235 aa16.87■□□□□ 0.29
PRDM16-208ENST00000514189 A0A0G2JS52 829 aa16.86■□□□□ 0.29
PRDM16-208ENST00000514189 MORC1Q86VD1 984 aa16.85■□□□□ 0.29
PRDM16-208ENST00000514189 NAP1L5Q96NT1 182 aaPredicted RBP16.85■□□□□ 0.29
PRDM16-208ENST00000514189 MLECQ14165 292 aa16.84■□□□□ 0.29
PRDM16-208ENST00000514189 BCL2L13Q9BXK5 485 aa16.84■□□□□ 0.29
PRDM16-208ENST00000514189 ZNF644Q9H582 1327 aaPredicted RBP16.84■□□□□ 0.29
PRDM16-208ENST00000514189 RRP7AQ9Y3A4 280 aaKnown RBP16.84■□□□□ 0.29
PRDM16-208ENST00000514189 ROCK2O75116 1388 aaKnown RBP16.83■□□□□ 0.29
PRDM16-208ENST00000514189 IPO9Q96P70 1041 aaKnown RBP16.83■□□□□ 0.28
PRDM16-208ENST00000514189 SRPK2P78362 688 aaKnown RBP16.82■□□□□ 0.28
PRDM16-208ENST00000514189 CUX1P39880 1505 aa16.82■□□□□ 0.28
PRDM16-208ENST00000514189 PLCB2Q00722 1185 aa16.82■□□□□ 0.28
PRDM16-208ENST00000514189 FMN1Q68DA7 1419 aa16.81■□□□□ 0.28
PRDM16-208ENST00000514189 U2AF1L5P0DN76 240 aaPredicted RBP16.81■□□□□ 0.28
PRDM16-208ENST00000514189 U2AF1Q01081 240 aaKnown RBP eCLIP16.81■□□□□ 0.28
PRDM16-208ENST00000514189 GAPVD1Q14C86 1478 aa16.81■□□□□ 0.28
PRDM16-208ENST00000514189 KTN1Q86UP2 1357 aaKnown RBP16.81■□□□□ 0.28
PRDM16-208ENST00000514189 CCDC184Q52MB2 194 aa16.79■□□□□ 0.28
PRDM16-208ENST00000514189 TOPBP1Q92547 1522 aa16.79■□□□□ 0.28
PRDM16-208ENST00000514189 ERICH6BQ5W0A0 696 aa16.78■□□□□ 0.28
PRDM16-208ENST00000514189 LMOD2Q6P5Q4 547 aa16.78■□□□□ 0.28
PRDM16-208ENST00000514189 PANK3Q9H999 370 aa16.77■□□□□ 0.28
PRDM16-208ENST00000514189 AQRO60306 1485 aaKnown RBP eCLIP16.77■□□□□ 0.28
PRDM16-208ENST00000514189 PHLDB1Q86UU1 1377 aa16.77■□□□□ 0.28
PRDM16-208ENST00000514189 HSP90AB1P08238 724 aaKnown RBP16.77■□□□□ 0.28
PRDM16-208ENST00000514189 TOP2BQ02880 1626 aa16.76■□□□□ 0.27
PRDM16-208ENST00000514189 NLRP13Q86W25 1043 aa16.76■□□□□ 0.27
PRDM16-208ENST00000514189 GOLGA6L22H0YM25 854 aa16.76■□□□□ 0.27
PRDM16-208ENST00000514189 TCERG1O14776 1098 aaKnown RBP16.75■□□□□ 0.27
PRDM16-208ENST00000514189 GLIPR1L2Q4G1C9 344 aa16.75■□□□□ 0.27
PRDM16-208ENST00000514189 FOXD4L1Q9NU39 408 aa16.75■□□□□ 0.27
PRDM16-208ENST00000514189 PDE4AP27815 886 aa16.75■□□□□ 0.27
PRDM16-208ENST00000514189 POLA1P09884 1462 aaPredicted RBP16.74■□□□□ 0.27
PRDM16-208ENST00000514189 PTMAP06454 111 aaKnown RBP16.74■□□□□ 0.27
PRDM16-208ENST00000514189 MRC2Q9UBG0 1479 aa16.73■□□□□ 0.27
PRDM16-208ENST00000514189 RALBP1Q15311 655 aa16.73■□□□□ 0.27
PRDM16-208ENST00000514189 LAMC3Q9Y6N6 1575 aa16.73■□□□□ 0.27
PRDM16-208ENST00000514189 WASHC2AQ641Q2 1341 aa16.73■□□□□ 0.27
PRDM16-208ENST00000514189 GOLGA2Q08379 1002 aa16.72■□□□□ 0.27
PRDM16-208ENST00000514189 DNTTIP2Q5QJE6 756 aaKnown RBP16.72■□□□□ 0.27
PRDM16-208ENST00000514189 JPH4Q96JJ6 628 aa16.72■□□□□ 0.27
PRDM16-208ENST00000514189 CRBNQ96SW2 442 aa16.72■□□□□ 0.27
PRDM16-208ENST00000514189 KIF3BO15066 747 aa16.72■□□□□ 0.27
PRDM16-208ENST00000514189 ARID3AQ99856 593 aa16.72■□□□□ 0.27
PRDM16-208ENST00000514189 ELL2O00472 640 aaPredicted RBP16.71■□□□□ 0.27
PRDM16-208ENST00000514189 MFAP1P55081 439 aaKnown RBP16.71■□□□□ 0.27
PRDM16-208ENST00000514189 ITPRIPQ8IWB1 547 aa16.7■□□□□ 0.26
PRDM16-208ENST00000514189 TRAK1Q9UPV9 953 aa16.7■□□□□ 0.26
PRDM16-208ENST00000514189 CARMIL2Q6F5E8 1435 aa16.7■□□□□ 0.26
PRDM16-208ENST00000514189 NUTM2FA1L443 756 aa16.69■□□□□ 0.26
PRDM16-208ENST00000514189 CDCA7LQ96GN5 454 aa16.68■□□□□ 0.26
PRDM16-208ENST00000514189 KIF7Q2M1P5 1343 aa16.68■□□□□ 0.26
PRDM16-208ENST00000514189 APAF1O14727 1248 aa16.68■□□□□ 0.26
PRDM16-208ENST00000514189 ZBED9Q6R2W3 1325 aa16.67■□□□□ 0.26
PRDM16-208ENST00000514189 DNMBPQ6XZF7 1577 aa16.67■□□□□ 0.26
PRDM16-208ENST00000514189 COG6Q9Y2V7 657 aa16.67■□□□□ 0.26
PRDM16-208ENST00000514189 HSCBQ8IWL3 235 aa16.66■□□□□ 0.26
PRDM16-208ENST00000514189 RRP1P56182 461 aaKnown RBP16.66■□□□□ 0.26
PRDM16-208ENST00000514189 CCDC18Q5T9S5 1454 aa16.65■□□□□ 0.26
PRDM16-208ENST00000514189 ANKRD30AQ9BXX3 1397 aa16.65■□□□□ 0.26
PRDM16-208ENST00000514189 USP47Q96K76 1375 aa16.65■□□□□ 0.26
PRDM16-208ENST00000514189 PAK3O75914 559 aaPredicted RBP16.64■□□□□ 0.25
PRDM16-208ENST00000514189 SMC4Q9NTJ3 1288 aa16.63■□□□□ 0.25
PRDM16-208ENST00000514189 KIF21BO75037 1637 aa16.63■□□□□ 0.25
PRDM16-208ENST00000514189 ARAP1Q96P48 1450 aa16.62■□□□□ 0.25
PRDM16-208ENST00000514189 MYBBP1AQ9BQG0 1328 aaKnown RBP16.61■□□□□ 0.25
PRDM16-208ENST00000514189 GRIN2BQ13224 1484 aa16.61■□□□□ 0.25
PRDM16-208ENST00000514189 NBPF8Q3BBV2 869 aa16.6■□□□□ 0.25
PRDM16-208ENST00000514189 PRXQ9BXM0 1461 aa16.6■□□□□ 0.25
PRDM16-208ENST00000514189 NOL8Q76FK4 1167 aaKnown RBP16.6■□□□□ 0.25
PRDM16-208ENST00000514189 SKAP1Q86WV1 359 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms