RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-222ENST00000514006 MLLT3P42568 568 aaPredicted RBP9.68□□□□□ -0.86
CALCOCO2-222ENST00000514006 KRI1Q8N9T8 703 aaKnown RBP9.68□□□□□ -0.86
CALCOCO2-222ENST00000514006 DAXXQ9UER7 740 aaPredicted RBP9.68□□□□□ -0.86
CALCOCO2-222ENST00000514006 GPHNQ9NQX3 736 aaPredicted RBP9.66□□□□□ -0.86
CALCOCO2-222ENST00000514006 TRPC6Q9Y210 931 aa9.66□□□□□ -0.86
CALCOCO2-222ENST00000514006 MS4A3Q96HJ5 214 aa9.65□□□□□ -0.86
CALCOCO2-222ENST00000514006 GPBP1L1Q9HC44 474 aaPredicted RBP9.63□□□□□ -0.87
CALCOCO2-222ENST00000514006 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.63□□□□□ -0.875e-7■■■■□ 20
CALCOCO2-222ENST00000514006 SPDYE16A6NNV3 312 aaPredicted RBP9.62□□□□□ -0.87
CALCOCO2-222ENST00000514006 DPYSL4O14531 572 aa9.62□□□□□ -0.87
CALCOCO2-222ENST00000514006 TIE1P35590 1138 aa9.61□□□□□ -0.87
CALCOCO2-222ENST00000514006 ILDR1Q86SU0 546 aaPredicted RBP9.61□□□□□ -0.87
CALCOCO2-222ENST00000514006 SUPT5HO00267 1087 aaKnown RBP9.6□□□□□ -0.87
CALCOCO2-222ENST00000514006 TTLL13PA6NNM8 815 aa9.59□□□□□ -0.87
CALCOCO2-222ENST00000514006 PDIA6Q15084 440 aa9.59□□□□□ -0.87
CALCOCO2-222ENST00000514006 EMILIN3Q9NT22 766 aa9.59□□□□□ -0.87
CALCOCO2-222ENST00000514006 DSG2Q14126 1118 aa9.58□□□□□ -0.88
CALCOCO2-222ENST00000514006 IL27Q8NEV9 243 aa9.58□□□□□ -0.88
CALCOCO2-222ENST00000514006 KDM4CQ9H3R0 1056 aa9.58□□□□□ -0.88
CALCOCO2-222ENST00000514006 TRIM66O15016 1216 aa9.57□□□□□ -0.88
CALCOCO2-222ENST00000514006 PDE4DQ08499 809 aa9.56□□□□□ -0.88
CALCOCO2-222ENST00000514006 TMC2Q8TDI7 906 aa9.56□□□□□ -0.88
CALCOCO2-222ENST00000514006 FOXK1P85037 733 aa9.55□□□□□ -0.88
CALCOCO2-222ENST00000514006 MICALL2Q8IY33 904 aa9.54□□□□□ -0.88
CALCOCO2-222ENST00000514006 BMP2KQ9NSY1 1161 aaPredicted RBP9.53□□□□□ -0.88
CALCOCO2-222ENST00000514006 TRIM35Q9UPQ4 493 aa9.53□□□□□ -0.88
CALCOCO2-222ENST00000514006 C19orf67A6NJJ6 358 aa9.52□□□□□ -0.89
CALCOCO2-222ENST00000514006 DPY19L2Q6NUT2 758 aa9.52□□□□□ -0.89
CALCOCO2-222ENST00000514006 GPR37O15354 613 aa9.5□□□□□ -0.89
CALCOCO2-222ENST00000514006 PLPP6Q8IY26 295 aa9.5□□□□□ -0.89
CALCOCO2-222ENST00000514006 MINK1Q8N4C8 1332 aaPredicted RBP9.49□□□□□ -0.89
CALCOCO2-222ENST00000514006 GRXCR2A6NFK2 248 aa9.48□□□□□ -0.89
CALCOCO2-222ENST00000514006 MAP3K9P80192 1104 aa9.48□□□□□ -0.89
CALCOCO2-222ENST00000514006 NUTM2FA1L443 756 aa9.47□□□□□ -0.89
CALCOCO2-222ENST00000514006 G3V3G9 751 aa9.46□□□□□ -0.9
CALCOCO2-222ENST00000514006 PDCD7Q8N8D1 485 aaKnown RBP9.46□□□□□ -0.9
CALCOCO2-222ENST00000514006 ZMYND15Q9H091 742 aa9.46□□□□□ -0.9
CALCOCO2-222ENST00000514006 PLSCR2Q9NRY7 297 aa9.46□□□□□ -0.9
CALCOCO2-222ENST00000514006 C2orf72A6NCS6 295 aa9.45□□□□□ -0.9
CALCOCO2-222ENST00000514006 MAP2K5Q13163 448 aa9.45□□□□□ -0.9
CALCOCO2-222ENST00000514006 FAM117AQ9C073 453 aa9.45□□□□□ -0.9
CALCOCO2-222ENST00000514006 GALR2O43603 387 aaPredicted RBP9.44□□□□□ -0.9
CALCOCO2-222ENST00000514006 CCDC102AQ96A19 550 aa9.44□□□□□ -0.9
CALCOCO2-222ENST00000514006 BOLA1Q9Y3E2 137 aa9.44□□□□□ -0.9
CALCOCO2-222ENST00000514006 ZNF316A6NFI3 1004 aaPredicted RBP9.43□□□□□ -0.9
CALCOCO2-222ENST00000514006 DDRGK1Q96HY6 314 aa9.43□□□□□ -0.9
CALCOCO2-222ENST00000514006 TMEM121BQ9BXQ6 578 aaPredicted RBP9.43□□□□□ -0.9
CALCOCO2-222ENST00000514006 RSPH6AQ9H0K4 717 aa9.43□□□□□ -0.9
CALCOCO2-222ENST00000514006 KIF3CO14782 793 aa9.42□□□□□ -0.9
CALCOCO2-222ENST00000514006 IRF6O14896 467 aa9.42□□□□□ -0.9
CALCOCO2-222ENST00000514006 LHX8Q68G74 356 aa9.42□□□□□ -0.9
CALCOCO2-222ENST00000514006 GNPATO15228 680 aa9.41□□□□□ -0.9
CALCOCO2-222ENST00000514006 AMHR2Q16671 573 aa9.41□□□□□ -0.9
CALCOCO2-222ENST00000514006 OCEL1Q9H607 264 aa9.41□□□□□ -0.9
CALCOCO2-222ENST00000514006 OSBPP22059 807 aa9.4□□□□□ -0.9
CALCOCO2-222ENST00000514006 IRX5P78411 483 aaPredicted RBP9.4□□□□□ -0.9
CALCOCO2-222ENST00000514006 UPF1Q92900 1129 aaKnown RBP eCLIP9.4□□□□□ -0.9
CALCOCO2-222ENST00000514006 FCHSD2O94868 740 aa9.39□□□□□ -0.91
CALCOCO2-222ENST00000514006 ATN1P54259 1190 aaPredicted RBP9.39□□□□□ -0.91
CALCOCO2-222ENST00000514006 HIC1Q14526 733 aa9.39□□□□□ -0.91
CALCOCO2-222ENST00000514006 PARP9Q8IXQ6 854 aa9.39□□□□□ -0.91
CALCOCO2-222ENST00000514006 PLEKHG3A1L390 1219 aa9.38□□□□□ -0.91
CALCOCO2-222ENST00000514006 IER5LQ5T953 404 aa9.38□□□□□ -0.91
CALCOCO2-222ENST00000514006 PTGER2P43116 358 aa9.37□□□□□ -0.91
CALCOCO2-222ENST00000514006 CLCN6P51797 869 aa9.37□□□□□ -0.91
CALCOCO2-222ENST00000514006 EVX2Q03828 476 aa9.37□□□□□ -0.91
CALCOCO2-222ENST00000514006 DDX12PQ92771 950 aa9.37□□□□□ -0.91
CALCOCO2-222ENST00000514006 TBC1D12O60347 775 aa9.36□□□□□ -0.91
CALCOCO2-222ENST00000514006 FECHP22830 423 aa9.35□□□□□ -0.91
CALCOCO2-222ENST00000514006 TTLL12Q14166 644 aaPredicted RBP9.35□□□□□ -0.91
CALCOCO2-222ENST00000514006 OXER1Q8TDS5 423 aa9.35□□□□□ -0.91
CALCOCO2-222ENST00000514006 PLCG2P16885 1265 aa9.34□□□□□ -0.91
CALCOCO2-222ENST00000514006 L3MBTL3Q96JM7 780 aaPredicted RBP9.34□□□□□ -0.91
CALCOCO2-222ENST00000514006 ATMINO43313 823 aaPredicted RBP9.33□□□□□ -0.92
CALCOCO2-222ENST00000514006 ASTLQ6HA08 431 aaPredicted RBP9.32□□□□□ -0.92
CALCOCO2-222ENST00000514006 EVI5O60447 810 aa9.31□□□□□ -0.92
CALCOCO2-222ENST00000514006 FLIIQ13045 1269 aa9.31□□□□□ -0.92
CALCOCO2-222ENST00000514006 GOPCQ9HD26 462 aa9.31□□□□□ -0.92
CALCOCO2-222ENST00000514006 UBTFP17480 764 aaKnown RBP9.3□□□□□ -0.92
CALCOCO2-222ENST00000514006 PTGDRQ13258 359 aa9.3□□□□□ -0.92
CALCOCO2-222ENST00000514006 TMEM92Q6UXU6 159 aa9.29□□□□□ -0.92
CALCOCO2-222ENST00000514006 GIGYF2Q6Y7W6 1299 aaKnown RBP9.29□□□□□ -0.92
CALCOCO2-222ENST00000514006 GABBR2O75899 941 aa9.28□□□□□ -0.92
CALCOCO2-222ENST00000514006 PRIM1P49642 420 aaKnown RBP9.28□□□□□ -0.92
CALCOCO2-222ENST00000514006 PCMTD1Q96MG8 357 aaPredicted RBP9.26□□□□□ -0.93
CALCOCO2-222ENST00000514006 ARID3AQ99856 593 aa9.26□□□□□ -0.93
CALCOCO2-222ENST00000514006 MS4A1P11836 297 aa9.25□□□□□ -0.93
CALCOCO2-222ENST00000514006 SEC24BO95487 1268 aa9.24□□□□□ -0.93
CALCOCO2-222ENST00000514006 PTCD2Q8WV60 388 aaKnown RBP9.23□□□□□ -0.93
CALCOCO2-222ENST00000514006 REPIN1Q9BWE0 567 aaKnown RBP9.22□□□□□ -0.93
CALCOCO2-222ENST00000514006 C1orf115Q9H7X2 142 aa9.22□□□□□ -0.93
CALCOCO2-222ENST00000514006 ARID3CA6NKF2 412 aa9.21□□□□□ -0.94
CALCOCO2-222ENST00000514006 APBB1O00213 710 aa9.21□□□□□ -0.94
CALCOCO2-222ENST00000514006 ONECUT3O60422 494 aaPredicted RBP9.21□□□□□ -0.94
CALCOCO2-222ENST00000514006 CLCN1P35523 988 aa9.21□□□□□ -0.94
CALCOCO2-222ENST00000514006 EPAS1Q99814 870 aa9.21□□□□□ -0.94
CALCOCO2-222ENST00000514006 CDHR5Q9HBB8 845 aa9.21□□□□□ -0.94
CALCOCO2-222ENST00000514006 ANO8Q9HCE9 1232 aaPredicted RBP9.21□□□□□ -0.94
CALCOCO2-222ENST00000514006 PODXL2Q9NZ53 605 aa9.21□□□□□ -0.94
CALCOCO2-222ENST00000514006 MAP3K7O43318 606 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms