RNA–Protein interactions for RNA: ENST00000513801.5

ATP2C1-221, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,439 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-221ENST00000513801 PABPN1Q86U42 306 aaKnown RBP eCLIP16.43■□□□□ 0.22
ATP2C1-221ENST00000513801 CDCA7LQ96GN5 454 aa16.43■□□□□ 0.22
ATP2C1-221ENST00000513801 TIAM1Q13009 1591 aa16.43■□□□□ 0.22
ATP2C1-221ENST00000513801 PTPRKQ15262 1439 aa16.42■□□□□ 0.22
ATP2C1-221ENST00000513801 TMC1Q8TDI8 760 aa16.42■□□□□ 0.22
ATP2C1-221ENST00000513801 HSP90AA1P07900 732 aaKnown RBP16.41■□□□□ 0.22
ATP2C1-221ENST00000513801 PNISRQ8TF01 805 aaKnown RBP16.4■□□□□ 0.22
ATP2C1-221ENST00000513801 CRBNQ96SW2 442 aa16.4■□□□□ 0.22
ATP2C1-221ENST00000513801 PANK2Q9BZ23 570 aa16.39■□□□□ 0.22
ATP2C1-221ENST00000513801 NCOA1Q15788 1441 aa16.39■□□□□ 0.21
ATP2C1-221ENST00000513801 PNNQ9H307 717 aaKnown RBP16.39■□□□□ 0.21
ATP2C1-221ENST00000513801 SLKQ9H2G2 1235 aaPredicted RBP16.38■□□□□ 0.21
ATP2C1-221ENST00000513801 ERICH3Q5RHP9 1530 aa16.38■□□□□ 0.21
ATP2C1-221ENST00000513801 RGS3P49796 1198 aa16.38■□□□□ 0.21
ATP2C1-221ENST00000513801 C20orf194Q5TEA3 1177 aa16.38■□□□□ 0.21
ATP2C1-221ENST00000513801 GZF1Q9H116 711 aaPredicted RBP16.38■□□□□ 0.21
ATP2C1-221ENST00000513801 ZNF326Q5BKZ1 582 aaKnown RBP16.36■□□□□ 0.21
ATP2C1-221ENST00000513801 UACAQ9BZF9 1416 aa16.36■□□□□ 0.21
ATP2C1-221ENST00000513801 C8orf34Q49A92 452 aa16.32■□□□□ 0.2
ATP2C1-221ENST00000513801 MAP3K1Q13233 1512 aa16.32■□□□□ 0.2
ATP2C1-221ENST00000513801 RRP9O43818 475 aaKnown RBP16.31■□□□□ 0.2
ATP2C1-221ENST00000513801 XRCC6P12956 609 aaKnown RBP eCLIP16.31■□□□□ 0.2
ATP2C1-221ENST00000513801 DHX29Q7Z478 1369 aaKnown RBP16.31■□□□□ 0.2
ATP2C1-221ENST00000513801 SPRYD3Q8NCJ5 442 aa16.29■□□□□ 0.2
ATP2C1-221ENST00000513801 RBM10P98175 930 aaKnown RBP16.28■□□□□ 0.2
ATP2C1-221ENST00000513801 NAIPQ13075 1403 aa16.27■□□□□ 0.2
ATP2C1-221ENST00000513801 TOP2BQ02880 1626 aa16.26■□□□□ 0.19
ATP2C1-221ENST00000513801 FAM161AQ3B820 660 aa16.26■□□□□ 0.19
ATP2C1-221ENST00000513801 KIF27Q86VH2 1401 aa16.25■□□□□ 0.19
ATP2C1-221ENST00000513801 ARID3AQ99856 593 aa16.24■□□□□ 0.19
ATP2C1-221ENST00000513801 HFM1A2PYH4 1435 aa16.24■□□□□ 0.19
ATP2C1-221ENST00000513801 SEC24BO95487 1268 aa16.24■□□□□ 0.19
ATP2C1-221ENST00000513801 MPHOSPH9Q99550 1183 aa16.24■□□□□ 0.19
ATP2C1-221ENST00000513801 DENND4BO75064 1496 aaPredicted RBP16.23■□□□□ 0.19
ATP2C1-221ENST00000513801 FGD6Q6ZV73 1430 aa16.22■□□□□ 0.19
ATP2C1-221ENST00000513801 CLCN1P35523 988 aa16.22■□□□□ 0.19
ATP2C1-221ENST00000513801 ERBB4Q15303 1308 aa16.22■□□□□ 0.19
ATP2C1-221ENST00000513801 FHOD3Q2V2M9 1422 aa16.22■□□□□ 0.19
ATP2C1-221ENST00000513801 PTPN23Q9H3S7 1636 aa16.21■□□□□ 0.19
ATP2C1-221ENST00000513801 L1TD1Q5T7N2 865 aaKnown RBP16.2■□□□□ 0.18
ATP2C1-221ENST00000513801 FMN1Q68DA7 1419 aa16.19■□□□□ 0.18
ATP2C1-221ENST00000513801 GOLGA6L3A6NEY3 463 aa16.19■□□□□ 0.18
ATP2C1-221ENST00000513801 PCF11O94913 1555 aaKnown RBP16.18■□□□□ 0.18
ATP2C1-221ENST00000513801 KDM2BQ8NHM5 1336 aa16.17■□□□□ 0.18
ATP2C1-221ENST00000513801 SPATA31E1Q6ZUB1 1445 aa16.16■□□□□ 0.18
ATP2C1-221ENST00000513801 USP19O94966 1318 aa16.15■□□□□ 0.18
ATP2C1-221ENST00000513801 KTN1Q86UP2 1357 aaKnown RBP16.14■□□□□ 0.17
ATP2C1-221ENST00000513801 IGF1RP08069 1367 aa16.13■□□□□ 0.17
ATP2C1-221ENST00000513801 MTUS2Q5JR59 1369 aa16.13■□□□□ 0.17
ATP2C1-221ENST00000513801 PRDM4Q9UKN5 801 aa16.13■□□□□ 0.17
ATP2C1-221ENST00000513801 AAMPQ13685 434 aa16.12■□□□□ 0.17
ATP2C1-221ENST00000513801 LRPPRCP42704 1394 aaKnown RBP16.12■□□□□ 0.17
ATP2C1-221ENST00000513801 ESPNB1AK53 854 aa16.11■□□□□ 0.17
ATP2C1-221ENST00000513801 CUX1P39880 1505 aa16.11■□□□□ 0.17
ATP2C1-221ENST00000513801 ARID3CA6NKF2 412 aa16.11■□□□□ 0.17
ATP2C1-221ENST00000513801 CENPQQ7L2Z9 268 aaPredicted RBP16.11■□□□□ 0.17
ATP2C1-221ENST00000513801 KDM6BO15054 1643 aa16.1■□□□□ 0.17
ATP2C1-221ENST00000513801 CARMIL1Q5VZK9 1371 aa16.09■□□□□ 0.17
ATP2C1-221ENST00000513801 USP47Q96K76 1375 aa16.09■□□□□ 0.17
ATP2C1-221ENST00000513801 FSD2A1L4K1 749 aa16.09■□□□□ 0.17
ATP2C1-221ENST00000513801 ANTXR1Q9H6X2 564 aa16.07■□□□□ 0.16
ATP2C1-221ENST00000513801 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.07■□□□□ 0.16
ATP2C1-221ENST00000513801 MYBBP1AQ9BQG0 1328 aaKnown RBP16.07■□□□□ 0.16
ATP2C1-221ENST00000513801 CC2D1BQ5T0F9 858 aaKnown RBP16.06■□□□□ 0.16
ATP2C1-221ENST00000513801 MYH16Q9H6N6 1097 aa16.06■□□□□ 0.16
ATP2C1-221ENST00000513801 BCORL1Q5H9F3 1711 aa16.06■□□□□ 0.16
ATP2C1-221ENST00000513801 PRDM10Q9NQV6 1147 aa16.06■□□□□ 0.16
ATP2C1-221ENST00000513801 BIVM-ERCC5R4GMW8 1640 aa16.05■□□□□ 0.16
ATP2C1-221ENST00000513801 KIAA1211Q6ZU35 1233 aa16.05■□□□□ 0.16
ATP2C1-221ENST00000513801 SLC4A1APQ9BWU0 796 aaKnown RBP16.05■□□□□ 0.16
ATP2C1-221ENST00000513801 IGHDP01880 384 aa16.05■□□□□ 0.16
ATP2C1-221ENST00000513801 PDCL3Q9H2J4 239 aa16.05■□□□□ 0.16
ATP2C1-221ENST00000513801 ZHX1Q9UKY1 873 aaPredicted RBP16.05■□□□□ 0.16
ATP2C1-221ENST00000513801 FAM13BQ9NYF5 915 aa16.04■□□□□ 0.16
ATP2C1-221ENST00000513801 TRAK2O60296 914 aa16.03■□□□□ 0.16
ATP2C1-221ENST00000513801 CFAP43Q8NDM7 1665 aa16.03■□□□□ 0.16
ATP2C1-221ENST00000513801 MCM4P33991 863 aa16.03■□□□□ 0.16
ATP2C1-221ENST00000513801 TBC1D2Q9BYX2 928 aa16.03■□□□□ 0.16
ATP2C1-221ENST00000513801 FGD1P98174 961 aa16.03■□□□□ 0.16
ATP2C1-221ENST00000513801 KDM2AQ9Y2K7 1162 aa16.03■□□□□ 0.16
ATP2C1-221ENST00000513801 ST20-MTHFSA0A0A6YYL1 179 aa16.02■□□□□ 0.16
ATP2C1-221ENST00000513801 PDE3BQ13370 1112 aa16.02■□□□□ 0.16
ATP2C1-221ENST00000513801 BECN1Q14457 450 aa16.02■□□□□ 0.15
ATP2C1-221ENST00000513801 GRPEL1Q9HAV7 217 aa16.01■□□□□ 0.15
ATP2C1-221ENST00000513801 ATAD2BQ9ULI0 1458 aa16.01■□□□□ 0.15
ATP2C1-221ENST00000513801 BRD4O60885 1362 aaPredicted RBP16.01■□□□□ 0.15
ATP2C1-221ENST00000513801 ANKRD30BQ9BXX2 1392 aa16.01■□□□□ 0.15
ATP2C1-221ENST00000513801 CFTRP13569 1480 aa16.01■□□□□ 0.15
ATP2C1-221ENST00000513801 MYOM3Q5VTT5 1437 aa16■□□□□ 0.15
ATP2C1-221ENST00000513801 GAS2L3Q86XJ1 694 aa16■□□□□ 0.15
ATP2C1-221ENST00000513801 TRIM44Q96DX7 344 aaPredicted RBP16■□□□□ 0.15
ATP2C1-221ENST00000513801 KIF15Q9NS87 1388 aa16■□□□□ 0.15
ATP2C1-221ENST00000513801 TEX14Q8IWB6 1497 aa15.99■□□□□ 0.15
ATP2C1-221ENST00000513801 CALD1Q05682 793 aaKnown RBP15.99■□□□□ 0.15
ATP2C1-221ENST00000513801 RIPK4P57078 832 aa15.99■□□□□ 0.15
ATP2C1-221ENST00000513801 CARD11Q9BXL7 1154 aa15.98■□□□□ 0.15
ATP2C1-221ENST00000513801 MRE11P49959 708 aa15.98■□□□□ 0.15
ATP2C1-221ENST00000513801 NLRP13Q86W25 1043 aa15.97■□□□□ 0.15
ATP2C1-221ENST00000513801 ABCA5Q8WWZ7 1642 aa15.97■□□□□ 0.15
ATP2C1-221ENST00000513801 BCAR3O75815 825 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms