RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, humanhuman

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-210ENST00000513582 DDRGK1Q96HY6 314 aa14.74□□□□□ -0.05
PDCD6-210ENST00000513582 PODXL2Q9NZ53 605 aa14.74□□□□□ -0.05
PDCD6-210ENST00000513582 ARXQ96QS3 562 aa14.73□□□□□ -0.05
PDCD6-210ENST00000513582 RNF123Q5XPI4 1314 aa14.73□□□□□ -0.05
PDCD6-210ENST00000513582 NAP1L5Q96NT1 182 aaPredicted RBP14.71□□□□□ -0.05
PDCD6-210ENST00000513582 RRAGDQ9NQL2 400 aaPredicted RBP14.7□□□□□ -0.06
PDCD6-210ENST00000513582 TIAM1Q13009 1591 aa14.7□□□□□ -0.06
PDCD6-210ENST00000513582 FGD5Q6ZNL6 1462 aa14.7□□□□□ -0.06
PDCD6-210ENST00000513582 SENP3Q9H4L4 574 aaPredicted RBP14.7□□□□□ -0.06
PDCD6-210ENST00000513582 MAP3K1Q13233 1512 aa14.69□□□□□ -0.06
PDCD6-210ENST00000513582 LRRC9Q6ZRR7 1453 aa14.69□□□□□ -0.06
PDCD6-210ENST00000513582 HSP90AA2PQ14568 343 aaPredicted RBP14.68□□□□□ -0.06
PDCD6-210ENST00000513582 SLC4A1APQ9BWU0 796 aaKnown RBP14.68□□□□□ -0.06
PDCD6-210ENST00000513582 CCDC7Q96M83 1385 aa14.67□□□□□ -0.06
PDCD6-210ENST00000513582 RAD54L2Q9Y4B4 1467 aa14.67□□□□□ -0.06
PDCD6-210ENST00000513582 RRP1P56182 461 aaKnown RBP14.67□□□□□ -0.06
PDCD6-210ENST00000513582 MS4A1P11836 297 aa14.66□□□□□ -0.06
PDCD6-210ENST00000513582 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.65□□□□□ -0.069e-7■■■■□ 21.2
PDCD6-210ENST00000513582 NCOA2Q15596 1464 aa14.64□□□□□ -0.07
PDCD6-210ENST00000513582 CCDC18Q5T9S5 1454 aa14.63□□□□□ -0.07
PDCD6-210ENST00000513582 ARID4BQ4LE39 1312 aaPredicted RBP14.63□□□□□ -0.07
PDCD6-210ENST00000513582 HSP90AA1P07900 732 aaKnown RBP14.62□□□□□ -0.07
PDCD6-210ENST00000513582 RGL3Q3MIN7 710 aa14.62□□□□□ -0.07
PDCD6-210ENST00000513582 POGKQ9P215 609 aa14.62□□□□□ -0.07
PDCD6-210ENST00000513582 PLIN1O60240 522 aa14.61□□□□□ -0.07
PDCD6-210ENST00000513582 KIF7Q2M1P5 1343 aa14.61□□□□□ -0.07
PDCD6-210ENST00000513582 TMC1Q8TDI8 760 aa14.61□□□□□ -0.07
PDCD6-210ENST00000513582 RCAN3Q9UKA8 241 aa14.6□□□□□ -0.07
PDCD6-210ENST00000513582 PRDM2Q13029 1718 aa14.6□□□□□ -0.07
PDCD6-210ENST00000513582 FANCD2Q9BXW9 1451 aa14.6□□□□□ -0.07
PDCD6-210ENST00000513582 PNNQ9H307 717 aaKnown RBP14.59□□□□□ -0.07
PDCD6-210ENST00000513582 KDM5BQ9UGL1 1544 aa14.59□□□□□ -0.07
PDCD6-210ENST00000513582 L3MBTL2Q969R5 705 aa14.59□□□□□ -0.07
PDCD6-210ENST00000513582 UACAQ9BZF9 1416 aa14.59□□□□□ -0.07
PDCD6-210ENST00000513582 NCOA1Q15788 1441 aa14.58□□□□□ -0.08
PDCD6-210ENST00000513582 AQRO60306 1485 aaKnown RBP eCLIP14.58□□□□□ -0.081e-6■■■■□ 25.2
PDCD6-210ENST00000513582 NESP48681 1621 aa14.58□□□□□ -0.08
PDCD6-210ENST00000513582 CHMP7Q8WUX9 453 aaPredicted RBP14.56□□□□□ -0.08
PDCD6-210ENST00000513582 FMN1Q68DA7 1419 aa14.55□□□□□ -0.08
PDCD6-210ENST00000513582 RRP9O43818 475 aaKnown RBP14.54□□□□□ -0.08
PDCD6-210ENST00000513582 PCF11O94913 1555 aaKnown RBP14.54□□□□□ -0.08
PDCD6-210ENST00000513582 FYCO1Q9BQS8 1478 aa14.54□□□□□ -0.08
PDCD6-210ENST00000513582 ZNF644Q9H582 1327 aaPredicted RBP14.54□□□□□ -0.08
PDCD6-210ENST00000513582 A0A0U1RQG5 324 aaPredicted RBP14.54□□□□□ -0.08
PDCD6-210ENST00000513582 CASKIN1Q8WXD9 1431 aa14.54□□□□□ -0.08
PDCD6-210ENST00000513582 PNISRQ8TF01 805 aaKnown RBP14.54□□□□□ -0.08
PDCD6-210ENST00000513582 EFCAB5A4FU69 1503 aa14.53□□□□□ -0.08
PDCD6-210ENST00000513582 CRBNQ96SW2 442 aa14.52□□□□□ -0.08
PDCD6-210ENST00000513582 NBPF8Q3BBV2 869 aa14.52□□□□□ -0.09
PDCD6-210ENST00000513582 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.51□□□□□ -0.092e-7■■■■■ 43.8
PDCD6-210ENST00000513582 PTPRKQ15262 1439 aa14.51□□□□□ -0.09
PDCD6-210ENST00000513582 SLKQ9H2G2 1235 aaPredicted RBP14.5□□□□□ -0.09
PDCD6-210ENST00000513582 RGS3P49796 1198 aa14.5□□□□□ -0.09
PDCD6-210ENST00000513582 MPHOSPH9Q99550 1183 aa14.5□□□□□ -0.09
PDCD6-210ENST00000513582 CFDP1Q9UEE9 299 aaPredicted RBP14.5□□□□□ -0.09
PDCD6-210ENST00000513582 CFAP43Q8NDM7 1665 aa14.5□□□□□ -0.09
PDCD6-210ENST00000513582 ABCA10Q8WWZ4 1543 aa14.49□□□□□ -0.09
PDCD6-210ENST00000513582 DNMBPQ6XZF7 1577 aa14.49□□□□□ -0.09
PDCD6-210ENST00000513582 CDCA7LQ96GN5 454 aa14.49□□□□□ -0.09
PDCD6-210ENST00000513582 L1TD1Q5T7N2 865 aaKnown RBP14.48□□□□□ -0.09
PDCD6-210ENST00000513582 FGD6Q6ZV73 1430 aa14.48□□□□□ -0.09
PDCD6-210ENST00000513582 GZF1Q9H116 711 aaPredicted RBP14.48□□□□□ -0.09
PDCD6-210ENST00000513582 POLA1P09884 1462 aaPredicted RBP14.48□□□□□ -0.09
PDCD6-210ENST00000513582 HFM1A2PYH4 1435 aa14.48□□□□□ -0.09
PDCD6-210ENST00000513582 TOPBP1Q92547 1522 aa14.47□□□□□ -0.09
PDCD6-210ENST00000513582 FAM161AQ3B820 660 aa14.47□□□□□ -0.09
PDCD6-210ENST00000513582 PANK2Q9BZ23 570 aa14.47□□□□□ -0.09
PDCD6-210ENST00000513582 CC2D2AQ9P2K1 1620 aa14.47□□□□□ -0.09
PDCD6-210ENST00000513582 NAIPQ13075 1403 aa14.45□□□□□ -0.1
PDCD6-210ENST00000513582 C8orf34Q49A92 452 aa14.45□□□□□ -0.1
PDCD6-210ENST00000513582 DHX29Q7Z478 1369 aaKnown RBP14.45□□□□□ -0.1
PDCD6-210ENST00000513582 C20orf194Q5TEA3 1177 aa14.44□□□□□ -0.1
PDCD6-210ENST00000513582 CUL7Q14999 1698 aa14.44□□□□□ -0.1
PDCD6-210ENST00000513582 XRCC6P12956 609 aaKnown RBP eCLIP14.44□□□□□ -0.11e-5■■■□□ 14.9
PDCD6-210ENST00000513582 PTPN23Q9H3S7 1636 aa14.43□□□□□ -0.1
PDCD6-210ENST00000513582 CLCN1P35523 988 aa14.43□□□□□ -0.1
PDCD6-210ENST00000513582 CARD11Q9BXL7 1154 aa14.43□□□□□ -0.1
PDCD6-210ENST00000513582 CC2D1BQ5T0F9 858 aaKnown RBP14.42□□□□□ -0.1
PDCD6-210ENST00000513582 GOLGA6L3A6NEY3 463 aa14.41□□□□□ -0.1
PDCD6-210ENST00000513582 PKD2Q13563 968 aa14.4□□□□□ -0.1
PDCD6-210ENST00000513582 PDS5BQ9NTI5 1447 aa14.4□□□□□ -0.1
PDCD6-210ENST00000513582 TSPY4P0CV99 314 aa14.4□□□□□ -0.1
PDCD6-210ENST00000513582 TSPY10P0CW01 314 aa14.4□□□□□ -0.1
PDCD6-210ENST00000513582 RBM10P98175 930 aaKnown RBP14.4□□□□□ -0.1
PDCD6-210ENST00000513582 MYOM3Q5VTT5 1437 aa14.39□□□□□ -0.11
PDCD6-210ENST00000513582 KTN1Q86UP2 1357 aaKnown RBP14.39□□□□□ -0.11
PDCD6-210ENST00000513582 SPRYD3Q8NCJ5 442 aa14.38□□□□□ -0.11
PDCD6-210ENST00000513582 CTTNBP2Q8WZ74 1663 aa14.37□□□□□ -0.11
PDCD6-210ENST00000513582 CHGAP10645 457 aaKnown RBP14.36□□□□□ -0.11
PDCD6-210ENST00000513582 GAPVD1Q14C86 1478 aa14.36□□□□□ -0.11
PDCD6-210ENST00000513582 CENPQQ7L2Z9 268 aaPredicted RBP14.36□□□□□ -0.11
PDCD6-210ENST00000513582 PLEKHD1A6NEE1 506 aa14.35□□□□□ -0.11
PDCD6-210ENST00000513582 DENND4BO75064 1496 aaPredicted RBP14.34□□□□□ -0.11
PDCD6-210ENST00000513582 SPATA31E1Q6ZUB1 1445 aa14.34□□□□□ -0.11
PDCD6-210ENST00000513582 KDM2BQ8NHM5 1336 aa14.34□□□□□ -0.11
PDCD6-210ENST00000513582 HNRNPMP52272 730 aaKnown RBP eCLIP14.33□□□□□ -0.112e-7■■■■■ 37.9
PDCD6-210ENST00000513582 SNAPC4Q5SXM2 1469 aa14.33□□□□□ -0.12
PDCD6-210ENST00000513582 BECN1Q14457 450 aa14.32□□□□□ -0.12
PDCD6-210ENST00000513582 LRPPRCP42704 1394 aaKnown RBP14.32□□□□□ -0.12
PDCD6-210ENST00000513582 ARID3AQ99856 593 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms