RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 PLCH2O75038 1416 aa18.56■□□□□ 0.56
DDX41-216ENST00000513562 FER1L4A9Z1Z3 1794 aa18.55■□□□□ 0.56
DDX41-216ENST00000513562 C9orf84Q5VXU9 1444 aa18.55■□□□□ 0.56
DDX41-216ENST00000513562 ATP10AO60312 1499 aa18.54■□□□□ 0.56
DDX41-216ENST00000513562 EEA1Q15075 1411 aa18.52■□□□□ 0.56
DDX41-216ENST00000513562 CDK13Q14004 1512 aaKnown RBP18.52■□□□□ 0.56
DDX41-216ENST00000513562 DISP3Q9P2K9 1392 aa18.51■□□□□ 0.55
DDX41-216ENST00000513562 PREX1Q8TCU6 1659 aa18.5■□□□□ 0.55
DDX41-216ENST00000513562 ILDR2Q71H61 639 aa18.5■□□□□ 0.55
DDX41-216ENST00000513562 CEBPAP49715 358 aaPredicted RBP18.48■□□□□ 0.55
DDX41-216ENST00000513562 DMRT2Q9Y5R5 561 aa18.48■□□□□ 0.55
DDX41-216ENST00000513562 SOCS7O14512 581 aa18.47■□□□□ 0.55
DDX41-216ENST00000513562 UHRF1BP1Q6BDS2 1440 aa18.47■□□□□ 0.55
DDX41-216ENST00000513562 EFCAB2Q5VUJ9 269 aa18.46■□□□□ 0.55
DDX41-216ENST00000513562 ZNF518AQ6AHZ1 1483 aa18.45■□□□□ 0.54
DDX41-216ENST00000513562 STRCQ7RTU9 1775 aa18.43■□□□□ 0.54
DDX41-216ENST00000513562 KDM5CP41229 1560 aa18.42■□□□□ 0.54
DDX41-216ENST00000513562 PTPRTO14522 1441 aa18.41■□□□□ 0.54
DDX41-216ENST00000513562 REREQ9P2R6 1566 aa18.39■□□□□ 0.53
DDX41-216ENST00000513562 MYO5CQ9NQX4 1742 aa18.38■□□□□ 0.53
DDX41-216ENST00000513562 AFAP1Q8N556 730 aa18.38■□□□□ 0.53
DDX41-216ENST00000513562 FMN1Q68DA7 1419 aa18.38■□□□□ 0.53
DDX41-216ENST00000513562 SPATA31D1Q6ZQQ2 1576 aa18.38■□□□□ 0.53
DDX41-216ENST00000513562 DIP2CQ9Y2E4 1556 aa18.38■□□□□ 0.53
DDX41-216ENST00000513562 CDK11AQ9UQ88 783 aaPredicted RBP18.37■□□□□ 0.53
DDX41-216ENST00000513562 KIF14Q15058 1648 aa18.37■□□□□ 0.53
DDX41-216ENST00000513562 TROQ12816 1431 aaPredicted RBP18.36■□□□□ 0.53
DDX41-216ENST00000513562 ARHGAP5Q13017 1502 aa18.36■□□□□ 0.53
DDX41-216ENST00000513562 LTBP4Q8N2S1 1624 aa18.34■□□□□ 0.53
DDX41-216ENST00000513562 MLH3Q9UHC1 1453 aa18.34■□□□□ 0.53
DDX41-216ENST00000513562 AGLP35573 1532 aa18.33■□□□□ 0.53
DDX41-216ENST00000513562 IQSEC2Q5JU85 1478 aa18.33■□□□□ 0.53
DDX41-216ENST00000513562 ATP1B4Q9UN42 357 aaPredicted RBP18.33■□□□□ 0.52
DDX41-216ENST00000513562 TRAPPC8Q9Y2L5 1435 aa18.32■□□□□ 0.52
DDX41-216ENST00000513562 ABCA6Q8N139 1617 aa18.32■□□□□ 0.52
DDX41-216ENST00000513562 NCOA1Q15788 1441 aa18.32■□□□□ 0.52
DDX41-216ENST00000513562 ARHGAP35Q9NRY4 1499 aa18.31■□□□□ 0.52
DDX41-216ENST00000513562 C3P01024 1663 aa18.31■□□□□ 0.52
DDX41-216ENST00000513562 CLIP1P30622 1438 aa18.31■□□□□ 0.52
DDX41-216ENST00000513562 MYT1LQ9UL68 1186 aa18.3■□□□□ 0.52
DDX41-216ENST00000513562 ESF1Q9H501 851 aaKnown RBP18.28■□□□□ 0.52
DDX41-216ENST00000513562 CNTLNQ9NXG0 1405 aa18.28■□□□□ 0.52
DDX41-216ENST00000513562 ABCC1P33527 1531 aa18.28■□□□□ 0.52
DDX41-216ENST00000513562 SETD1BQ9UPS6 1966 aaKnown RBP18.27■□□□□ 0.52
DDX41-216ENST00000513562 NPATQ14207 1427 aa18.24■□□□□ 0.51
DDX41-216ENST00000513562 UBTFP17480 764 aaKnown RBP18.22■□□□□ 0.51
DDX41-216ENST00000513562 CDC42BPBQ9Y5S2 1711 aa18.22■□□□□ 0.51
DDX41-216ENST00000513562 PREX2Q70Z35 1606 aa18.22■□□□□ 0.51
DDX41-216ENST00000513562 CAMSAP1Q5T5Y3 1602 aa18.21■□□□□ 0.51
DDX41-216ENST00000513562 ITSN2Q9NZM3 1697 aa18.19■□□□□ 0.5
DDX41-216ENST00000513562 KIDINS220Q9ULH0 1771 aa18.19■□□□□ 0.5
DDX41-216ENST00000513562 LRRIQ1Q96JM4 1722 aa18.18■□□□□ 0.5
DDX41-216ENST00000513562 ZMYM3Q14202 1370 aa18.17■□□□□ 0.5
DDX41-216ENST00000513562 EHMT2Q96KQ7 1210 aa18.17■□□□□ 0.5
DDX41-216ENST00000513562 MROH2AA6NES4 1674 aa18.16■□□□□ 0.5
DDX41-216ENST00000513562 CCDC18Q5T9S5 1454 aa18.16■□□□□ 0.5
DDX41-216ENST00000513562 ZNF335Q9H4Z2 1342 aaPredicted RBP18.16■□□□□ 0.5
DDX41-216ENST00000513562 PLA2R1Q13018 1463 aa18.15■□□□□ 0.5
DDX41-216ENST00000513562 SAMD9LQ8IVG5 1584 aa18.15■□□□□ 0.5
DDX41-216ENST00000513562 NCKAP5LQ9HCH0 1330 aa18.15■□□□□ 0.5
DDX41-216ENST00000513562 UBAP1LF5GYI3 381 aa18.14■□□□□ 0.49
DDX41-216ENST00000513562 CASKIN1Q8WXD9 1431 aa18.14■□□□□ 0.49
DDX41-216ENST00000513562 PKD2Q13563 968 aa18.13■□□□□ 0.49
DDX41-216ENST00000513562 TCOF1Q13428 1488 aaKnown RBP18.13■□□□□ 0.49
DDX41-216ENST00000513562 ZNF142P52746 1687 aaPredicted RBP18.1■□□□□ 0.49
DDX41-216ENST00000513562 MYO3AQ8NEV4 1616 aa18.1■□□□□ 0.49
DDX41-216ENST00000513562 SYCP2Q9BX26 1530 aa18.1■□□□□ 0.49
DDX41-216ENST00000513562 PTPRKQ15262 1439 aa18.1■□□□□ 0.49
DDX41-216ENST00000513562 SPAG9O60271 1321 aaKnown RBP18.1■□□□□ 0.49
DDX41-216ENST00000513562 PLXNC1O60486 1568 aa18.09■□□□□ 0.49
DDX41-216ENST00000513562 CDC42BPAQ5VT25 1732 aa18.09■□□□□ 0.49
DDX41-216ENST00000513562 CEP170BQ9Y4F5 1589 aaPredicted RBP18.08■□□□□ 0.49
DDX41-216ENST00000513562 ATP7AQ04656 1500 aa18.07■□□□□ 0.48
DDX41-216ENST00000513562 GPATCH8Q9UKJ3 1502 aaKnown RBP18.07■□□□□ 0.48
DDX41-216ENST00000513562 KIAA1107Q9UPP5 1409 aa18.06■□□□□ 0.48
DDX41-216ENST00000513562 ZNF777Q9ULD5 760 aaPredicted RBP18.06■□□□□ 0.48
DDX41-216ENST00000513562 A2MP01023 1474 aa18.06■□□□□ 0.48
DDX41-216ENST00000513562 INO80Q9ULG1 1556 aaPredicted RBP18.05■□□□□ 0.48
DDX41-216ENST00000513562 CLTCQ00610 1675 aaKnown RBP18.04■□□□□ 0.48
DDX41-216ENST00000513562 FYCO1Q9BQS8 1478 aa18.04■□□□□ 0.48
DDX41-216ENST00000513562 HNRNPMP52272 730 aaKnown RBP eCLIP18.04■□□□□ 0.48
DDX41-216ENST00000513562 PPP6R1Q9UPN7 881 aa18.04■□□□□ 0.48
DDX41-216ENST00000513562 PLEKHH2Q8IVE3 1493 aa18.03■□□□□ 0.48
DDX41-216ENST00000513562 SUPT6HQ7KZ85 1726 aaKnown RBP18.03■□□□□ 0.48
DDX41-216ENST00000513562 A2ML1A8K2U0 1454 aa18.01■□□□□ 0.47
DDX41-216ENST00000513562 GGT6Q6P531 493 aa18■□□□□ 0.47
DDX41-216ENST00000513562 MED1Q15648 1581 aaPredicted RBP17.99■□□□□ 0.47
DDX41-216ENST00000513562 HSPA1LP34931 641 aa17.98■□□□□ 0.47
DDX41-216ENST00000513562 CFDP1Q9UEE9 299 aaPredicted RBP17.98■□□□□ 0.47
DDX41-216ENST00000513562 CPS1P31327 1500 aa17.97■□□□□ 0.47
DDX41-216ENST00000513562 DNMT1P26358 1616 aaKnown RBP17.96■□□□□ 0.47
DDX41-216ENST00000513562 CCNB3Q8WWL7 1395 aa17.94■□□□□ 0.46
DDX41-216ENST00000513562 NEURL4Q96JN8 1562 aa17.94■□□□□ 0.46
DDX41-216ENST00000513562 SCAF1Q9H7N4 1312 aaKnown RBP17.94■□□□□ 0.46
DDX41-216ENST00000513562 SHANK2Q9UPX8 1470 aa17.94■□□□□ 0.46
DDX41-216ENST00000513562 TOM1O60784 492 aa17.93■□□□□ 0.46
DDX41-216ENST00000513562 PIP4K2BP78356 416 aa17.93■□□□□ 0.46
DDX41-216ENST00000513562 ADGBQ8N7X0 1667 aa17.92■□□□□ 0.46
DDX41-216ENST00000513562 TNRQ92752 1358 aa17.91■□□□□ 0.46
DDX41-216ENST00000513562 MBD5Q9P267 1494 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms