RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 SCUBE2Q9NQ36 999 aa13.36□□□□□ -0.27
CHD1-209ENST00000512844 WDR70Q9NW82 654 aa13.36□□□□□ -0.27
CHD1-209ENST00000512844 PDE4AP27815 886 aa13.35□□□□□ -0.27
CHD1-209ENST00000512844 POTEB2H3BUK9 544 aa13.34□□□□□ -0.27
CHD1-209ENST00000512844 CADPS2Q86UW7 1296 aa13.31□□□□□ -0.28
CHD1-209ENST00000512844 LARP6Q9BRS8 491 aaKnown RBP13.28□□□□□ -0.28
CHD1-209ENST00000512844 POTEJP0CG39 1038 aa13.26□□□□□ -0.29
CHD1-209ENST00000512844 DDX27Q96GQ7 796 aaKnown RBP13.25□□□□□ -0.29
CHD1-209ENST00000512844 GPHNQ9NQX3 736 aaPredicted RBP13.25□□□□□ -0.29
CHD1-209ENST00000512844 CRISPLD2Q9H0B8 497 aa13.24□□□□□ -0.29
CHD1-209ENST00000512844 NCKAP5LQ9HCH0 1330 aa13.22□□□□□ -0.29
CHD1-209ENST00000512844 C2orf72A6NCS6 295 aa13.22□□□□□ -0.29
CHD1-209ENST00000512844 SLAIN1Q8ND83 568 aa13.22□□□□□ -0.29
CHD1-209ENST00000512844 KDM2AQ9Y2K7 1162 aa13.2□□□□□ -0.3
CHD1-209ENST00000512844 PPP1R15BQ5SWA1 713 aa13.19□□□□□ -0.3
CHD1-209ENST00000512844 FOXK1P85037 733 aa13.16□□□□□ -0.3
CHD1-209ENST00000512844 MFSD10Q14728 455 aa13.16□□□□□ -0.3
CHD1-209ENST00000512844 P3H3Q8IVL6 736 aa13.16□□□□□ -0.3
CHD1-209ENST00000512844 TMEM92Q6UXU6 159 aa13.15□□□□□ -0.3
CHD1-209ENST00000512844 OTUD5Q96G74 571 aa13.15□□□□□ -0.3
CHD1-209ENST00000512844 KIF3CO14782 793 aa13.14□□□□□ -0.31
CHD1-209ENST00000512844 DSG2Q14126 1118 aa13.14□□□□□ -0.31
CHD1-209ENST00000512844 PLPP6Q8IY26 295 aa13.14□□□□□ -0.31
CHD1-209ENST00000512844 E2F4Q16254 413 aa13.12□□□□□ -0.31
CHD1-209ENST00000512844 SNPHO15079 494 aa13.08□□□□□ -0.32
CHD1-209ENST00000512844 RIMBP2O15034 1052 aa13.05□□□□□ -0.32
CHD1-209ENST00000512844 DOK7Q18PE1 504 aa13.05□□□□□ -0.32
CHD1-209ENST00000512844 TBC1D12O60347 775 aa13.02□□□□□ -0.33
CHD1-209ENST00000512844 ZNF710Q8N1W2 664 aa13.02□□□□□ -0.33
CHD1-209ENST00000512844 ZNF316A6NFI3 1004 aaPredicted RBP13□□□□□ -0.33
CHD1-209ENST00000512844 CAMK2BQ13554 666 aa13□□□□□ -0.33
CHD1-209ENST00000512844 KCNV2Q8TDN2 545 aa13□□□□□ -0.33
CHD1-209ENST00000512844 UPF1Q92900 1129 aaKnown RBP eCLIP13□□□□□ -0.33
CHD1-209ENST00000512844 MAP3K9P80192 1104 aa12.99□□□□□ -0.33
CHD1-209ENST00000512844 POTEMA6NI47 508 aa12.98□□□□□ -0.33
CHD1-209ENST00000512844 NBR1Q14596 966 aa12.98□□□□□ -0.33
CHD1-209ENST00000512844 ARHGEF1Q92888 912 aaKnown RBP12.98□□□□□ -0.33
CHD1-209ENST00000512844 SLC34A2O95436 690 aa12.96□□□□□ -0.33
CHD1-209ENST00000512844 DPYSL4O14531 572 aa12.93□□□□□ -0.34
CHD1-209ENST00000512844 EMILIN3Q9NT22 766 aa12.93□□□□□ -0.34
CHD1-209ENST00000512844 POTEGQ6S5H5 508 aa12.92□□□□□ -0.34
CHD1-209ENST00000512844 PTCD2Q8WV60 388 aaKnown RBP12.92□□□□□ -0.34
CHD1-209ENST00000512844 ZSWIM6Q9HCJ5 1215 aa12.92□□□□□ -0.34
CHD1-209ENST00000512844 OXER1Q8TDS5 423 aa12.91□□□□□ -0.34
CHD1-209ENST00000512844 BCANQ96GW7 911 aa12.9□□□□□ -0.34
CHD1-209ENST00000512844 ARIH1Q9Y4X5 557 aaPredicted RBP12.9□□□□□ -0.34
CHD1-209ENST00000512844 SPDYE16A6NNV3 312 aaPredicted RBP12.89□□□□□ -0.35
CHD1-209ENST00000512844 HOXB3P14651 431 aaPredicted RBP12.89□□□□□ -0.35
CHD1-209ENST00000512844 PCDHGA4Q9Y5G9 962 aa12.89□□□□□ -0.35
CHD1-209ENST00000512844 TULP1O00294 542 aaPredicted RBP12.86□□□□□ -0.35
CHD1-209ENST00000512844 EVI5O60447 810 aa12.84□□□□□ -0.35
CHD1-209ENST00000512844 ARSIQ5FYB1 569 aa12.84□□□□□ -0.35
CHD1-209ENST00000512844 PDIA6Q15084 440 aa12.83□□□□□ -0.36
CHD1-209ENST00000512844 PCDH10Q9P2E7 1040 aa12.83□□□□□ -0.36
CHD1-209ENST00000512844 FAM163AQ96GL9 167 aaPredicted RBP12.82□□□□□ -0.36
CHD1-209ENST00000512844 NUDT7P0C024 238 aa12.8□□□□□ -0.36
CHD1-209ENST00000512844 SMYD5Q6GMV2 418 aa12.79□□□□□ -0.36
CHD1-209ENST00000512844 HOXB1P14653 301 aaPredicted RBP12.78□□□□□ -0.36
CHD1-209ENST00000512844 GPR153Q6NV75 609 aa12.78□□□□□ -0.36
CHD1-209ENST00000512844 KHSRPQ92945 711 aaKnown RBP eCLIP12.76□□□□□ -0.373e-6■■■□□ 15.6
CHD1-209ENST00000512844 SEMA3EO15041 775 aa12.75□□□□□ -0.37
CHD1-209ENST00000512844 ST18O60284 1047 aa12.74□□□□□ -0.37
CHD1-209ENST00000512844 PSDA5PKW4 1024 aaPredicted RBP12.72□□□□□ -0.37
CHD1-209ENST00000512844 GRXCR2A6NFK2 248 aa12.72□□□□□ -0.37
CHD1-209ENST00000512844 EMP3P54852 163 aa12.72□□□□□ -0.37
CHD1-209ENST00000512844 LCE2DQ5TA82 110 aaPredicted RBP12.72□□□□□ -0.37
CHD1-209ENST00000512844 DDX12PQ92771 950 aa12.71□□□□□ -0.37
CHD1-209ENST00000512844 ANO8Q9HCE9 1232 aaPredicted RBP12.71□□□□□ -0.37
CHD1-209ENST00000512844 ERBB3P21860 1342 aa12.69□□□□□ -0.38
CHD1-209ENST00000512844 TESPA1A2RU30 521 aaPredicted RBP12.69□□□□□ -0.38
CHD1-209ENST00000512844 PTGER2P43116 358 aa12.68□□□□□ -0.38
CHD1-209ENST00000512844 ZNF454Q8N9F8 522 aa12.68□□□□□ -0.38
CHD1-209ENST00000512844 LHX6Q9UPM6 363 aa12.68□□□□□ -0.38
CHD1-209ENST00000512844 PPP4R3BQ5MIZ7 849 aa12.67□□□□□ -0.38
CHD1-209ENST00000512844 PHF14O94880 888 aa12.66□□□□□ -0.38
CHD1-209ENST00000512844 MARVELD3Q96A59 401 aa12.66□□□□□ -0.38
CHD1-209ENST00000512844 JPH4Q96JJ6 628 aa12.66□□□□□ -0.38
CHD1-209ENST00000512844 EPAS1Q99814 870 aa12.66□□□□□ -0.38
CHD1-209ENST00000512844 MLLT3P42568 568 aaPredicted RBP12.65□□□□□ -0.38
CHD1-209ENST00000512844 TYW1BQ6NUM6 668 aa12.64□□□□□ -0.39
CHD1-209ENST00000512844 FBXW7Q969H0 707 aa12.64□□□□□ -0.39
CHD1-209ENST00000512844 KDM4FA0A1W2PPD8 638 aa12.63□□□□□ -0.39
CHD1-209ENST00000512844 KCNH8Q96L42 1107 aa12.62□□□□□ -0.39
CHD1-209ENST00000512844 FAM205CA6NFA0 338 aa12.61□□□□□ -0.39
CHD1-209ENST00000512844 FOSBP53539 338 aa12.61□□□□□ -0.39
CHD1-209ENST00000512844 ZDHHC16Q969W1 377 aa12.61□□□□□ -0.39
CHD1-209ENST00000512844 VARS2Q5ST30 1063 aaKnown RBP12.6□□□□□ -0.39
CHD1-209ENST00000512844 PCDHGA10Q9Y5H3 936 aa12.59□□□□□ -0.39
CHD1-209ENST00000512844 MAP3K7O43318 606 aa12.58□□□□□ -0.4
CHD1-209ENST00000512844 RBM33Q96EV2 1170 aaKnown RBP12.58□□□□□ -0.4
CHD1-209ENST00000512844 LMOD2Q6P5Q4 547 aa12.56□□□□□ -0.4
CHD1-209ENST00000512844 NUTM2FA1L443 756 aa12.55□□□□□ -0.4
CHD1-209ENST00000512844 OSBPP22059 807 aa12.55□□□□□ -0.4
CHD1-209ENST00000512844 EN1Q05925 392 aaPredicted RBP12.55□□□□□ -0.4
CHD1-209ENST00000512844 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.53□□□□□ -0.4
CHD1-209ENST00000512844 HS3ST6Q96QI5 342 aa12.53□□□□□ -0.4
CHD1-209ENST00000512844 PTPREP23469 700 aa12.52□□□□□ -0.41
CHD1-209ENST00000512844 RBM26Q5T8P6 1007 aaKnown RBP12.52□□□□□ -0.41
CHD1-209ENST00000512844 GPIHBP1Q8IV16 184 aa12.52□□□□□ -0.41
CHD1-209ENST00000512844 ADAM33Q9BZ11 813 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms