RNA–Protein interactions for RNA: ENST00000512466.1

PDCD6-209, Transcript of programmed cell death 6, humanhuman

TSL 2

Gene PDCD6, Length 3,763 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-209ENST00000512466 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.45□□□□□ -0.1
PDCD6-209ENST00000512466 CTTNBP2Q8WZ74 1663 aa14.44□□□□□ -0.1
PDCD6-209ENST00000512466 L3MBTL2Q969R5 705 aa14.44□□□□□ -0.1
PDCD6-209ENST00000512466 ANO8Q9HCE9 1232 aaPredicted RBP14.44□□□□□ -0.1
PDCD6-209ENST00000512466 RRBP1Q9P2E9 1410 aaKnown RBP14.43□□□□□ -0.1
PDCD6-209ENST00000512466 CASKIN1Q8WXD9 1431 aa14.43□□□□□ -0.1
PDCD6-209ENST00000512466 DAXXQ9UER7 740 aaPredicted RBP14.43□□□□□ -0.1
PDCD6-209ENST00000512466 MSH5O43196 834 aa14.42□□□□□ -0.1
PDCD6-209ENST00000512466 CEP170Q5SW79 1584 aa14.4□□□□□ -0.1
PDCD6-209ENST00000512466 ZBTB47Q9UFB7 747 aaPredicted RBP14.4□□□□□ -0.1
PDCD6-209ENST00000512466 TIMELESSQ9UNS1 1208 aa14.39□□□□□ -0.11
PDCD6-209ENST00000512466 UGGT2Q9NYU1 1516 aa14.39□□□□□ -0.11
PDCD6-209ENST00000512466 CYB5RLQ6IPT4 315 aa14.38□□□□□ -0.11
PDCD6-209ENST00000512466 MPHOSPH9Q99550 1183 aa14.37□□□□□ -0.11
PDCD6-209ENST00000512466 LAS1LQ9Y4W2 734 aaKnown RBP14.37□□□□□ -0.11
PDCD6-209ENST00000512466 FYCO1Q9BQS8 1478 aa14.37□□□□□ -0.11
PDCD6-209ENST00000512466 RGL3Q3MIN7 710 aa14.37□□□□□ -0.11
PDCD6-209ENST00000512466 WASHC2AQ641Q2 1341 aa14.36□□□□□ -0.11
PDCD6-209ENST00000512466 MYT1LQ9UL68 1186 aa14.36□□□□□ -0.11
PDCD6-209ENST00000512466 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.35□□□□□ -0.11
PDCD6-209ENST00000512466 CHD1O14646 1710 aa14.34□□□□□ -0.11
PDCD6-209ENST00000512466 NOP58Q9Y2X3 529 aaKnown RBP14.34□□□□□ -0.11
PDCD6-209ENST00000512466 DISP1Q96F81 1524 aa14.33□□□□□ -0.12
PDCD6-209ENST00000512466 CFDP1Q9UEE9 299 aaPredicted RBP14.33□□□□□ -0.12
PDCD6-209ENST00000512466 LRRC9Q6ZRR7 1453 aa14.33□□□□□ -0.12
PDCD6-209ENST00000512466 PLB1Q6P1J6 1458 aa14.33□□□□□ -0.12
PDCD6-209ENST00000512466 PRKRIP1Q9H875 184 aaPredicted RBP14.32□□□□□ -0.12
PDCD6-209ENST00000512466 CCDC18Q5T9S5 1454 aa14.31□□□□□ -0.12
PDCD6-209ENST00000512466 PCF11O94913 1555 aaKnown RBP14.31□□□□□ -0.12
PDCD6-209ENST00000512466 KIAA0556O60303 1618 aa14.3□□□□□ -0.12
PDCD6-209ENST00000512466 C11orf95C9JLR9 678 aaPredicted RBP14.3□□□□□ -0.12
PDCD6-209ENST00000512466 UACAQ9BZF9 1416 aa14.29□□□□□ -0.12
PDCD6-209ENST00000512466 CARD11Q9BXL7 1154 aa14.29□□□□□ -0.12
PDCD6-209ENST00000512466 SAMD9Q5K651 1589 aa14.28□□□□□ -0.12
PDCD6-209ENST00000512466 EPRSP07814 1512 aaKnown RBP14.27□□□□□ -0.12
PDCD6-209ENST00000512466 HECW1Q76N89 1606 aa14.27□□□□□ -0.13
PDCD6-209ENST00000512466 ZNF644Q9H582 1327 aaPredicted RBP14.26□□□□□ -0.13
PDCD6-209ENST00000512466 TIAM1Q13009 1591 aa14.26□□□□□ -0.13
PDCD6-209ENST00000512466 PAK3O75914 559 aaPredicted RBP14.26□□□□□ -0.13
PDCD6-209ENST00000512466 CDK13Q14004 1512 aaKnown RBP14.25□□□□□ -0.13
PDCD6-209ENST00000512466 CC2D1BQ5T0F9 858 aaKnown RBP14.25□□□□□ -0.13
PDCD6-209ENST00000512466 MAPKBP1O60336 1514 aa14.25□□□□□ -0.13
PDCD6-209ENST00000512466 ARXQ96QS3 562 aa14.24□□□□□ -0.13
PDCD6-209ENST00000512466 TSPY4P0CV99 314 aa14.23□□□□□ -0.13
PDCD6-209ENST00000512466 TSPY10P0CW01 314 aa14.23□□□□□ -0.13
PDCD6-209ENST00000512466 PKD2Q13563 968 aa14.23□□□□□ -0.13
PDCD6-209ENST00000512466 NBPF8Q3BBV2 869 aa14.23□□□□□ -0.13
PDCD6-209ENST00000512466 SENP3Q9H4L4 574 aaPredicted RBP14.23□□□□□ -0.13
PDCD6-209ENST00000512466 DCAF11Q8TEB1 546 aa14.22□□□□□ -0.13
PDCD6-209ENST00000512466 FGD6Q6ZV73 1430 aa14.22□□□□□ -0.13
PDCD6-209ENST00000512466 MAP3K1Q13233 1512 aa14.22□□□□□ -0.13
PDCD6-209ENST00000512466 NUP153P49790 1475 aaKnown RBP14.2□□□□□ -0.14
PDCD6-209ENST00000512466 PLIN1O60240 522 aa14.2□□□□□ -0.14
PDCD6-209ENST00000512466 NEFMP07197 916 aa14.2□□□□□ -0.14
PDCD6-209ENST00000512466 RAPGEF6Q8TEU7 1601 aa14.2□□□□□ -0.14
PDCD6-209ENST00000512466 NCOA2Q15596 1464 aa14.19□□□□□ -0.14
PDCD6-209ENST00000512466 FANCIQ9NVI1 1328 aa14.19□□□□□ -0.14
PDCD6-209ENST00000512466 TROQ12816 1431 aaPredicted RBP14.19□□□□□ -0.14
PDCD6-209ENST00000512466 KIF7Q2M1P5 1343 aa14.19□□□□□ -0.14
PDCD6-209ENST00000512466 ATP10BO94823 1461 aa14.17□□□□□ -0.14
PDCD6-209ENST00000512466 EFCAB2Q5VUJ9 269 aa14.17□□□□□ -0.14
PDCD6-209ENST00000512466 AKNAQ7Z591 1439 aa14.16□□□□□ -0.14
PDCD6-209ENST00000512466 NUDCQ9Y266 331 aa14.16□□□□□ -0.14
PDCD6-209ENST00000512466 EHBP1L1Q8N3D4 1523 aa14.16□□□□□ -0.14
PDCD6-209ENST00000512466 EXOC6Q8TAG9 804 aa14.16□□□□□ -0.14
PDCD6-209ENST00000512466 SLC4A3P48751 1232 aa14.16□□□□□ -0.14
PDCD6-209ENST00000512466 ERCC6L2Q5T890 1561 aa14.15□□□□□ -0.14
PDCD6-209ENST00000512466 MYOM3Q5VTT5 1437 aa14.15□□□□□ -0.14
PDCD6-209ENST00000512466 RGS3P49796 1198 aa14.15□□□□□ -0.14
PDCD6-209ENST00000512466 SKAP1Q86WV1 359 aa14.15□□□□□ -0.14
PDCD6-209ENST00000512466 CLASP1Q7Z460 1538 aa14.14□□□□□ -0.15
PDCD6-209ENST00000512466 ZBED9Q6R2W3 1325 aa14.14□□□□□ -0.15
PDCD6-209ENST00000512466 ST20-MTHFSA0A0A6YYL1 179 aa14.14□□□□□ -0.15
PDCD6-209ENST00000512466 CCDC7Q96M83 1385 aa14.14□□□□□ -0.15
PDCD6-209ENST00000512466 CANXP27824 592 aaKnown RBP14.13□□□□□ -0.15
PDCD6-209ENST00000512466 HNRNPMP52272 730 aaKnown RBP eCLIP14.12□□□□□ -0.158e-6■■■■□ 19.5
PDCD6-209ENST00000512466 IL27Q8NEV9 243 aa14.12□□□□□ -0.15
PDCD6-209ENST00000512466 PTPRKQ15262 1439 aa14.12□□□□□ -0.15
PDCD6-209ENST00000512466 IPO9Q96P70 1041 aaKnown RBP14.12□□□□□ -0.15
PDCD6-209ENST00000512466 RCAN3Q9UKA8 241 aa14.1□□□□□ -0.15
PDCD6-209ENST00000512466 SUPT6HQ7KZ85 1726 aaKnown RBP14.09□□□□□ -0.15
PDCD6-209ENST00000512466 ABCC2Q92887 1545 aa14.09□□□□□ -0.15
PDCD6-209ENST00000512466 TRHP20396 242 aaPredicted RBP14.09□□□□□ -0.15
PDCD6-209ENST00000512466 NEUROD2Q15784 382 aa14.08□□□□□ -0.16
PDCD6-209ENST00000512466 ERICH6BQ5W0A0 696 aa14.08□□□□□ -0.16
PDCD6-209ENST00000512466 NAIPQ13075 1403 aa14.08□□□□□ -0.16
PDCD6-209ENST00000512466 ABCA8O94911 1581 aa14.08□□□□□ -0.16
PDCD6-209ENST00000512466 FAM69CQ0P6D2 419 aa14.07□□□□□ -0.16
PDCD6-209ENST00000512466 WDR43Q15061 677 aaKnown RBP eCLIP14.07□□□□□ -0.16
PDCD6-209ENST00000512466 CDCA7LQ96GN5 454 aa14.07□□□□□ -0.16
PDCD6-209ENST00000512466 CNTLNQ9NXG0 1405 aa14.07□□□□□ -0.16
PDCD6-209ENST00000512466 CFAP43Q8NDM7 1665 aa14.06□□□□□ -0.16
PDCD6-209ENST00000512466 RSPH4AQ5TD94 716 aa14.05□□□□□ -0.16
PDCD6-209ENST00000512466 SHROOM2Q13796 1616 aa14.05□□□□□ -0.16
PDCD6-209ENST00000512466 NUP155O75694 1391 aa14.05□□□□□ -0.16
PDCD6-209ENST00000512466 MIA2Q96PC5 1412 aa14.05□□□□□ -0.16
PDCD6-209ENST00000512466 ARHGEF11O15085 1522 aa14.05□□□□□ -0.16
PDCD6-209ENST00000512466 USP47Q96K76 1375 aa14.04□□□□□ -0.16
PDCD6-209ENST00000512466 CHGAP10645 457 aaKnown RBP14.04□□□□□ -0.16
PDCD6-209ENST00000512466 TNNT2P45379 298 aaPredicted RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 1391.7 ms