RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 FER1L4A9Z1Z3 1794 aa21.13■□□□□ 0.97
DDX41-215ENST00000512431 ATP10AO60312 1499 aa21.1■□□□□ 0.97
DDX41-215ENST00000512431 PLCH2O75038 1416 aa21.1■□□□□ 0.97
DDX41-215ENST00000512431 SIGLEC1Q9BZZ2 1709 aa21.09■□□□□ 0.97
DDX41-215ENST00000512431 EFCAB2Q5VUJ9 269 aa21.09■□□□□ 0.97
DDX41-215ENST00000512431 SOCS7O14512 581 aa21.08■□□□□ 0.97
DDX41-215ENST00000512431 CEBPAP49715 358 aaPredicted RBP21.08■□□□□ 0.97
DDX41-215ENST00000512431 C9orf84Q5VXU9 1444 aa21.08■□□□□ 0.97
DDX41-215ENST00000512431 EEA1Q15075 1411 aa21.07■□□□□ 0.96
DDX41-215ENST00000512431 ARHGEF12Q9NZN5 1544 aa21.07■□□□□ 0.96
DDX41-215ENST00000512431 PREX1Q8TCU6 1659 aa21.06■□□□□ 0.96
DDX41-215ENST00000512431 ILDR2Q71H61 639 aa21.06■□□□□ 0.96
DDX41-215ENST00000512431 MYT1LQ9UL68 1186 aa21.06■□□□□ 0.96
DDX41-215ENST00000512431 ATP1B4Q9UN42 357 aaPredicted RBP21.05■□□□□ 0.96
DDX41-215ENST00000512431 UHRF1BP1Q6BDS2 1440 aa21.04■□□□□ 0.96
DDX41-215ENST00000512431 CDK11AQ9UQ88 783 aaPredicted RBP21.03■□□□□ 0.96
DDX41-215ENST00000512431 CDK13Q14004 1512 aaKnown RBP21.02■□□□□ 0.96
DDX41-215ENST00000512431 ESF1Q9H501 851 aaKnown RBP20.99■□□□□ 0.95
DDX41-215ENST00000512431 ZNF518AQ6AHZ1 1483 aa20.98■□□□□ 0.95
DDX41-215ENST00000512431 AFAP1Q8N556 730 aa20.96■□□□□ 0.95
DDX41-215ENST00000512431 MYO5CQ9NQX4 1742 aa20.95■□□□□ 0.94
DDX41-215ENST00000512431 STRCQ7RTU9 1775 aa20.95■□□□□ 0.94
DDX41-215ENST00000512431 PTPRTO14522 1441 aa20.95■□□□□ 0.94
DDX41-215ENST00000512431 FMN1Q68DA7 1419 aa20.93■□□□□ 0.94
DDX41-215ENST00000512431 ARHGAP5Q13017 1502 aa20.92■□□□□ 0.94
DDX41-215ENST00000512431 SETD1BQ9UPS6 1966 aaKnown RBP20.92■□□□□ 0.94
DDX41-215ENST00000512431 CLIP1P30622 1438 aa20.89■□□□□ 0.94
DDX41-215ENST00000512431 SPATA31D1Q6ZQQ2 1576 aa20.89■□□□□ 0.93
DDX41-215ENST00000512431 UBTFP17480 764 aaKnown RBP20.88■□□□□ 0.93
DDX41-215ENST00000512431 KIF14Q15058 1648 aa20.88■□□□□ 0.93
DDX41-215ENST00000512431 KDM5CP41229 1560 aa20.88■□□□□ 0.93
DDX41-215ENST00000512431 TRAPPC8Q9Y2L5 1435 aa20.87■□□□□ 0.93
DDX41-215ENST00000512431 TROQ12816 1431 aaPredicted RBP20.87■□□□□ 0.93
DDX41-215ENST00000512431 REREQ9P2R6 1566 aa20.85■□□□□ 0.93
DDX41-215ENST00000512431 DIP2CQ9Y2E4 1556 aa20.85■□□□□ 0.93
DDX41-215ENST00000512431 MLH3Q9UHC1 1453 aa20.84■□□□□ 0.93
DDX41-215ENST00000512431 IQSEC2Q5JU85 1478 aa20.83■□□□□ 0.93
DDX41-215ENST00000512431 EHMT2Q96KQ7 1210 aa20.83■□□□□ 0.93
DDX41-215ENST00000512431 C3P01024 1663 aa20.83■□□□□ 0.92
DDX41-215ENST00000512431 CNTLNQ9NXG0 1405 aa20.81■□□□□ 0.92
DDX41-215ENST00000512431 AGLP35573 1532 aa20.81■□□□□ 0.92
DDX41-215ENST00000512431 LTBP4Q8N2S1 1624 aa20.8■□□□□ 0.92
DDX41-215ENST00000512431 NCOA1Q15788 1441 aa20.79■□□□□ 0.92
DDX41-215ENST00000512431 ABCA6Q8N139 1617 aa20.78■□□□□ 0.92
DDX41-215ENST00000512431 ARHGAP35Q9NRY4 1499 aa20.77■□□□□ 0.92
DDX41-215ENST00000512431 UBAP1LF5GYI3 381 aa20.74■□□□□ 0.91
DDX41-215ENST00000512431 CDC42BPBQ9Y5S2 1711 aa20.73■□□□□ 0.91
DDX41-215ENST00000512431 NPATQ14207 1427 aa20.72■□□□□ 0.91
DDX41-215ENST00000512431 ABCC1P33527 1531 aa20.72■□□□□ 0.91
DDX41-215ENST00000512431 CAMSAP1Q5T5Y3 1602 aa20.71■□□□□ 0.91
DDX41-215ENST00000512431 NCKAP5LQ9HCH0 1330 aa20.71■□□□□ 0.91
DDX41-215ENST00000512431 ZMYM3Q14202 1370 aa20.71■□□□□ 0.91
DDX41-215ENST00000512431 PREX2Q70Z35 1606 aa20.69■□□□□ 0.9
DDX41-215ENST00000512431 PKD2Q13563 968 aa20.69■□□□□ 0.9
DDX41-215ENST00000512431 ZNF335Q9H4Z2 1342 aaPredicted RBP20.69■□□□□ 0.9
DDX41-215ENST00000512431 ZNF777Q9ULD5 760 aaPredicted RBP20.68■□□□□ 0.9
DDX41-215ENST00000512431 ITSN2Q9NZM3 1697 aa20.67■□□□□ 0.9
DDX41-215ENST00000512431 KIDINS220Q9ULH0 1771 aa20.67■□□□□ 0.9
DDX41-215ENST00000512431 SPAG9O60271 1321 aaKnown RBP20.66■□□□□ 0.9
DDX41-215ENST00000512431 MROH2AA6NES4 1674 aa20.65■□□□□ 0.9
DDX41-215ENST00000512431 CCDC18Q5T9S5 1454 aa20.65■□□□□ 0.9
DDX41-215ENST00000512431 LRRIQ1Q96JM4 1722 aa20.62■□□□□ 0.89
DDX41-215ENST00000512431 SAMD9LQ8IVG5 1584 aa20.61■□□□□ 0.89
DDX41-215ENST00000512431 PLA2R1Q13018 1463 aa20.61■□□□□ 0.89
DDX41-215ENST00000512431 HNRNPMP52272 730 aaKnown RBP eCLIP20.6■□□□□ 0.89
DDX41-215ENST00000512431 GGT6Q6P531 493 aa20.6■□□□□ 0.89
DDX41-215ENST00000512431 PPP6R1Q9UPN7 881 aa20.6■□□□□ 0.89
DDX41-215ENST00000512431 CASKIN1Q8WXD9 1431 aa20.6■□□□□ 0.89
DDX41-215ENST00000512431 SCAF1Q9H7N4 1312 aaKnown RBP20.58■□□□□ 0.89
DDX41-215ENST00000512431 CDC42BPAQ5VT25 1732 aa20.57■□□□□ 0.88
DDX41-215ENST00000512431 SUPT6HQ7KZ85 1726 aaKnown RBP20.57■□□□□ 0.88
DDX41-215ENST00000512431 TCOF1Q13428 1488 aaKnown RBP20.56■□□□□ 0.88
DDX41-215ENST00000512431 CLTCQ00610 1675 aaKnown RBP20.55■□□□□ 0.88
DDX41-215ENST00000512431 PTPRKQ15262 1439 aa20.55■□□□□ 0.88
DDX41-215ENST00000512431 SYCP2Q9BX26 1530 aa20.55■□□□□ 0.88
DDX41-215ENST00000512431 MYO3AQ8NEV4 1616 aa20.55■□□□□ 0.88
DDX41-215ENST00000512431 A2MP01023 1474 aa20.55■□□□□ 0.88
DDX41-215ENST00000512431 CEP170BQ9Y4F5 1589 aaPredicted RBP20.55■□□□□ 0.88
DDX41-215ENST00000512431 TOM1O60784 492 aa20.54■□□□□ 0.88
DDX41-215ENST00000512431 CFDP1Q9UEE9 299 aaPredicted RBP20.54■□□□□ 0.88
DDX41-215ENST00000512431 ZNF142P52746 1687 aaPredicted RBP20.54■□□□□ 0.88
DDX41-215ENST00000512431 ATP7AQ04656 1500 aa20.53■□□□□ 0.88
DDX41-215ENST00000512431 PIP4K2BP78356 416 aa20.53■□□□□ 0.88
DDX41-215ENST00000512431 PLEKHH2Q8IVE3 1493 aa20.52■□□□□ 0.88
DDX41-215ENST00000512431 GPATCH8Q9UKJ3 1502 aaKnown RBP20.52■□□□□ 0.87
DDX41-215ENST00000512431 KIAA1107Q9UPP5 1409 aa20.52■□□□□ 0.87
DDX41-215ENST00000512431 HSPA1LP34931 641 aa20.5■□□□□ 0.87
DDX41-215ENST00000512431 FYCO1Q9BQS8 1478 aa20.49■□□□□ 0.87
DDX41-215ENST00000512431 CCNB3Q8WWL7 1395 aa20.48■□□□□ 0.87
DDX41-215ENST00000512431 PLXNC1O60486 1568 aa20.48■□□□□ 0.87
DDX41-215ENST00000512431 A2ML1A8K2U0 1454 aa20.47■□□□□ 0.87
DDX41-215ENST00000512431 INO80Q9ULG1 1556 aaPredicted RBP20.46■□□□□ 0.87
DDX41-215ENST00000512431 CPS1P31327 1500 aa20.45■□□□□ 0.86
DDX41-215ENST00000512431 PHF23Q9BUL5 403 aaPredicted RBP20.45■□□□□ 0.86
DDX41-215ENST00000512431 MED1Q15648 1581 aaPredicted RBP20.43■□□□□ 0.86
DDX41-215ENST00000512431 DNMT1P26358 1616 aaKnown RBP20.42■□□□□ 0.86
DDX41-215ENST00000512431 ANKLE2Q86XL3 938 aa20.41■□□□□ 0.86
DDX41-215ENST00000512431 SHANK2Q9UPX8 1470 aa20.41■□□□□ 0.86
DDX41-215ENST00000512431 MTUS2Q5JR59 1369 aa20.4■□□□□ 0.86
DDX41-215ENST00000512431 ADGBQ8N7X0 1667 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms