RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 KIF3CO14782 793 aa13.4□□□□□ -0.26
GYPB-212ENST00000511198 HOXB3P14651 431 aaPredicted RBP13.4□□□□□ -0.26
GYPB-212ENST00000511198 BBXQ8WY36 941 aaPredicted RBP13.38□□□□□ -0.27
GYPB-212ENST00000511198 C2orf72A6NCS6 295 aa13.37□□□□□ -0.27
GYPB-212ENST00000511198 POTEMA6NI47 508 aa13.37□□□□□ -0.27
GYPB-212ENST00000511198 POTEGQ6S5H5 508 aa13.36□□□□□ -0.27
GYPB-212ENST00000511198 DOK7Q18PE1 504 aa13.3□□□□□ -0.28
GYPB-212ENST00000511198 TMC2Q8TDI7 906 aa13.3□□□□□ -0.28
GYPB-212ENST00000511198 GPHNQ9NQX3 736 aaPredicted RBP13.27□□□□□ -0.29
GYPB-212ENST00000511198 MARVELD3Q96A59 401 aa13.25□□□□□ -0.29
GYPB-212ENST00000511198 ZNF710Q8N1W2 664 aa13.24□□□□□ -0.29
GYPB-212ENST00000511198 HOXB1P14653 301 aaPredicted RBP13.23□□□□□ -0.29
GYPB-212ENST00000511198 FOXK1P85037 733 aa13.22□□□□□ -0.29
GYPB-212ENST00000511198 CRISPLD2Q9H0B8 497 aa13.22□□□□□ -0.29
GYPB-212ENST00000511198 RIMBP2O15034 1052 aa13.21□□□□□ -0.29
GYPB-212ENST00000511198 GPR153Q6NV75 609 aa13.21□□□□□ -0.29
GYPB-212ENST00000511198 ZSWIM6Q9HCJ5 1215 aa13.21□□□□□ -0.29
GYPB-212ENST00000511198 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.21□□□□□ -0.29
GYPB-212ENST00000511198 NCKAP5LQ9HCH0 1330 aa13.2□□□□□ -0.3
GYPB-212ENST00000511198 DSG2Q14126 1118 aa13.2□□□□□ -0.3
GYPB-212ENST00000511198 SPRYD3Q8NCJ5 442 aa13.2□□□□□ -0.3
GYPB-212ENST00000511198 SLC34A2O95436 690 aa13.17□□□□□ -0.3
GYPB-212ENST00000511198 EMP3P54852 163 aa13.17□□□□□ -0.3
GYPB-212ENST00000511198 CADPS2Q86UW7 1296 aa13.17□□□□□ -0.3
GYPB-212ENST00000511198 PLPP6Q8IY26 295 aa13.17□□□□□ -0.3
GYPB-212ENST00000511198 PDE4AP27815 886 aa13.15□□□□□ -0.3
GYPB-212ENST00000511198 ARSIQ5FYB1 569 aa13.15□□□□□ -0.3
GYPB-212ENST00000511198 PAXIP1Q6ZW49 1069 aaPredicted RBP13.15□□□□□ -0.3
GYPB-212ENST00000511198 POTEB3A0JP26 581 aa13.13□□□□□ -0.31
GYPB-212ENST00000511198 POTEBQ6S5H4 581 aa13.13□□□□□ -0.31
GYPB-212ENST00000511198 PCDH10Q9P2E7 1040 aa13.13□□□□□ -0.31
GYPB-212ENST00000511198 KHSRPQ92945 711 aaKnown RBP eCLIP13.12□□□□□ -0.313e-6■■■□□ 17.7
GYPB-212ENST00000511198 CFAP44Q96MT7 982 aa13.12□□□□□ -0.31
GYPB-212ENST00000511198 FAM205CA6NFA0 338 aa13.1□□□□□ -0.31
GYPB-212ENST00000511198 CDAN1Q8IWY9 1227 aa13.1□□□□□ -0.31
GYPB-212ENST00000511198 LARP6Q9BRS8 491 aaKnown RBP13.1□□□□□ -0.31
GYPB-212ENST00000511198 PCDHGA4Q9Y5G9 962 aa13.1□□□□□ -0.31
GYPB-212ENST00000511198 PPP1R15BQ5SWA1 713 aa13.09□□□□□ -0.31
GYPB-212ENST00000511198 PTCD2Q8WV60 388 aaKnown RBP13.09□□□□□ -0.31
GYPB-212ENST00000511198 HS3ST6Q96QI5 342 aa13.09□□□□□ -0.31
GYPB-212ENST00000511198 MFSD10Q14728 455 aa13.08□□□□□ -0.32
GYPB-212ENST00000511198 DDX27Q96GQ7 796 aaKnown RBP13.05□□□□□ -0.32
GYPB-212ENST00000511198 ERBB3P21860 1342 aa13.05□□□□□ -0.32
GYPB-212ENST00000511198 NUDT7P0C024 238 aa13.04□□□□□ -0.32
GYPB-212ENST00000511198 KDM4FA0A1W2PPD8 638 aa13.02□□□□□ -0.33
GYPB-212ENST00000511198 VARS2Q5ST30 1063 aaKnown RBP13.01□□□□□ -0.33
GYPB-212ENST00000511198 OXER1Q8TDS5 423 aa13□□□□□ -0.33
GYPB-212ENST00000511198 ZNF316A6NFI3 1004 aaPredicted RBP12.99□□□□□ -0.33
GYPB-212ENST00000511198 UPF1Q92900 1129 aaKnown RBP eCLIP12.96□□□□□ -0.33
GYPB-212ENST00000511198 LHX6Q9UPM6 363 aa12.96□□□□□ -0.33
GYPB-212ENST00000511198 TBC1D12O60347 775 aa12.95□□□□□ -0.34
GYPB-212ENST00000511198 CCDC180Q9P1Z9 1646 aa12.95□□□□□ -0.34
GYPB-212ENST00000511198 KRTAP3-3Q9BYR6 98 aa12.94□□□□□ -0.34
GYPB-212ENST00000511198 KRTAP3-2Q9BYR7 98 aa12.94□□□□□ -0.34
GYPB-212ENST00000511198 EMILIN3Q9NT22 766 aa12.94□□□□□ -0.34
GYPB-212ENST00000511198 ZNF687Q8N1G0 1237 aa12.92□□□□□ -0.34
GYPB-212ENST00000511198 CAMK2BQ13554 666 aa12.91□□□□□ -0.34
GYPB-212ENST00000511198 TSHZ2Q9NRE2 1034 aa12.89□□□□□ -0.35
GYPB-212ENST00000511198 ANO8Q9HCE9 1232 aaPredicted RBP12.85□□□□□ -0.35
GYPB-212ENST00000511198 RB1CC1Q8TDY2 1594 aa12.85□□□□□ -0.35
GYPB-212ENST00000511198 MAP3K9P80192 1104 aa12.84□□□□□ -0.35
GYPB-212ENST00000511198 PLSCR2Q9NRY7 297 aa12.84□□□□□ -0.35
GYPB-212ENST00000511198 EVI5O60447 810 aa12.83□□□□□ -0.36
GYPB-212ENST00000511198 PLCB2Q00722 1185 aa12.83□□□□□ -0.36
GYPB-212ENST00000511198 PSDA5PKW4 1024 aaPredicted RBP12.82□□□□□ -0.36
GYPB-212ENST00000511198 POTEEQ6S8J3 1075 aa12.82□□□□□ -0.36
GYPB-212ENST00000511198 SPNS2Q8IVW8 549 aa12.78□□□□□ -0.36
GYPB-212ENST00000511198 WDR70Q9NW82 654 aa12.78□□□□□ -0.36
GYPB-212ENST00000511198 DPYSL4O14531 572 aa12.77□□□□□ -0.37
GYPB-212ENST00000511198 E2F4Q16254 413 aa12.77□□□□□ -0.37
GYPB-212ENST00000511198 CECR2Q9BXF3 1484 aa12.76□□□□□ -0.37
GYPB-212ENST00000511198 PBX2P40425 430 aa12.75□□□□□ -0.37
GYPB-212ENST00000511198 FOSBP53539 338 aa12.75□□□□□ -0.37
GYPB-212ENST00000511198 PPP4R3BQ5MIZ7 849 aa12.75□□□□□ -0.37
GYPB-212ENST00000511198 AXIN2Q9Y2T1 843 aa12.75□□□□□ -0.37
GYPB-212ENST00000511198 ZNF454Q8N9F8 522 aa12.73□□□□□ -0.37
GYPB-212ENST00000511198 JPH4Q96JJ6 628 aa12.72□□□□□ -0.37
GYPB-212ENST00000511198 ARHGAP33O14559 1287 aa12.71□□□□□ -0.37
GYPB-212ENST00000511198 LSM11P83369 360 aaKnown RBP eCLIP12.71□□□□□ -0.37
GYPB-212ENST00000511198 ARIH1Q9Y4X5 557 aaPredicted RBP12.71□□□□□ -0.37
GYPB-212ENST00000511198 MMRN1Q13201 1228 aa12.69□□□□□ -0.38
GYPB-212ENST00000511198 PSEN2P49810 448 aa12.67□□□□□ -0.38
GYPB-212ENST00000511198 PDIA6Q15084 440 aa12.67□□□□□ -0.38
GYPB-212ENST00000511198 ANKRD13DQ6ZTN6 518 aa12.67□□□□□ -0.38
GYPB-212ENST00000511198 BCL2L12Q9HB09 334 aa12.67□□□□□ -0.38
GYPB-212ENST00000511198 PCDHGA10Q9Y5H3 936 aa12.67□□□□□ -0.38
GYPB-212ENST00000511198 PTGER2P43116 358 aa12.65□□□□□ -0.38
GYPB-212ENST00000511198 DMRTA1Q5VZB9 504 aa12.65□□□□□ -0.38
GYPB-212ENST00000511198 ZDHHC16Q969W1 377 aa12.65□□□□□ -0.38
GYPB-212ENST00000511198 ADAM33Q9BZ11 813 aa12.64□□□□□ -0.39
GYPB-212ENST00000511198 CC2D2AQ9P2K1 1620 aa12.63□□□□□ -0.39
GYPB-212ENST00000511198 SPDYE16A6NNV3 312 aaPredicted RBP12.63□□□□□ -0.39
GYPB-212ENST00000511198 PHF14O94880 888 aa12.63□□□□□ -0.39
GYPB-212ENST00000511198 KCNK17Q96T54 332 aa12.63□□□□□ -0.39
GYPB-212ENST00000511198 BICRAQ9NZM4 1560 aa12.61□□□□□ -0.39
GYPB-212ENST00000511198 KCNV2Q8TDN2 545 aa12.61□□□□□ -0.39
GYPB-212ENST00000511198 UNC13AQ9UPW8 1703 aa12.61□□□□□ -0.39
GYPB-212ENST00000511198 HAP1P54257 671 aaPredicted RBP12.6□□□□□ -0.39
GYPB-212ENST00000511198 TYW1BQ6NUM6 668 aa12.6□□□□□ -0.39
GYPB-212ENST00000511198 DDX12PQ92771 950 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms