RNA–Protein interactions for RNA: ENST00000511092.5

CLCN3-207, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-207ENST00000511092 RUSC2Q8N2Y8 1516 aa12.29□□□□□ -0.44
CLCN3-207ENST00000511092 UBAP1LF5GYI3 381 aa12.29□□□□□ -0.44
CLCN3-207ENST00000511092 YEATS2Q9ULM3 1422 aa12.28□□□□□ -0.44
CLCN3-207ENST00000511092 RGS17Q9UGC6 210 aaPredicted RBP12.27□□□□□ -0.45
CLCN3-207ENST00000511092 JPH4Q96JJ6 628 aa12.25□□□□□ -0.45
CLCN3-207ENST00000511092 PTPRTO14522 1441 aa12.25□□□□□ -0.45
CLCN3-207ENST00000511092 CLEC11AQ9Y240 323 aa12.24□□□□□ -0.45
CLCN3-207ENST00000511092 CUX1P39880 1505 aa12.21□□□□□ -0.45
CLCN3-207ENST00000511092 CCDC88BA6NC98 1476 aa12.2□□□□□ -0.46
CLCN3-207ENST00000511092 SIGLEC1Q9BZZ2 1709 aa12.19□□□□□ -0.46
CLCN3-207ENST00000511092 FER1L4A9Z1Z3 1794 aa12.18□□□□□ -0.46
CLCN3-207ENST00000511092 SPDYE4A6NLX3 237 aa12.17□□□□□ -0.46
CLCN3-207ENST00000511092 ZCCHC11Q5TAX3 1644 aaKnown RBP12.14□□□□□ -0.47
CLCN3-207ENST00000511092 ARID4BQ4LE39 1312 aaPredicted RBP12.13□□□□□ -0.47
CLCN3-207ENST00000511092 PRKAR2AP13861 404 aaKnown RBP12.13□□□□□ -0.47
CLCN3-207ENST00000511092 POTEAQ6S8J7 498 aa12.13□□□□□ -0.47
CLCN3-207ENST00000511092 TTC37Q6PGP7 1564 aa12.13□□□□□ -0.47
CLCN3-207ENST00000511092 ABCA10Q8WWZ4 1543 aa12.12□□□□□ -0.47
CLCN3-207ENST00000511092 TTBK1Q5TCY1 1321 aaPredicted RBP12.11□□□□□ -0.47
CLCN3-207ENST00000511092 FHAD1B1AJZ9 1412 aa12.11□□□□□ -0.47
CLCN3-207ENST00000511092 MAGI3Q5TCQ9 1506 aa12.11□□□□□ -0.47
CLCN3-207ENST00000511092 PIP4K2BP78356 416 aa12.11□□□□□ -0.47
CLCN3-207ENST00000511092 PRR29P0C7W0 189 aa12.1□□□□□ -0.47
CLCN3-207ENST00000511092 FRMPD1Q5SYB0 1578 aa12.09□□□□□ -0.47
CLCN3-207ENST00000511092 SP7Q8TDD2 431 aaPredicted RBP12.09□□□□□ -0.47
CLCN3-207ENST00000511092 ZNF335Q9H4Z2 1342 aaPredicted RBP12.07□□□□□ -0.48
CLCN3-207ENST00000511092 ARAP3Q8WWN8 1544 aa12.06□□□□□ -0.48
CLCN3-207ENST00000511092 HAX1O00165 279 aa12.06□□□□□ -0.48
CLCN3-207ENST00000511092 UPF1Q92900 1129 aaKnown RBP eCLIP12.06□□□□□ -0.48
CLCN3-207ENST00000511092 ARHGEF40Q8TER5 1519 aa12.05□□□□□ -0.48
CLCN3-207ENST00000511092 ALKQ9UM73 1620 aa12.04□□□□□ -0.48
CLCN3-207ENST00000511092 CD109Q6YHK3 1445 aa12.03□□□□□ -0.48
CLCN3-207ENST00000511092 STAG3Q9UJ98 1225 aa12.03□□□□□ -0.48
CLCN3-207ENST00000511092 PTPRGP23470 1445 aa12.03□□□□□ -0.48
CLCN3-207ENST00000511092 UHRF1BP1LA0JNW5 1464 aa12.01□□□□□ -0.49
CLCN3-207ENST00000511092 KDM5BQ9UGL1 1544 aa12.01□□□□□ -0.49
CLCN3-207ENST00000511092 KIAA0556O60303 1618 aa12□□□□□ -0.49
CLCN3-207ENST00000511092 CHADLQ6NUI6 762 aa11.99□□□□□ -0.49
CLCN3-207ENST00000511092 WDR7Q9Y4E6 1490 aa11.99□□□□□ -0.49
CLCN3-207ENST00000511092 UHRF1BP1Q6BDS2 1440 aa11.98□□□□□ -0.49
CLCN3-207ENST00000511092 SETBP1Q9Y6X0 1596 aa11.97□□□□□ -0.49
CLCN3-207ENST00000511092 C19orf67A6NJJ6 358 aa11.97□□□□□ -0.49
CLCN3-207ENST00000511092 RAPGEF3O95398 923 aa11.97□□□□□ -0.49
CLCN3-207ENST00000511092 PROM2Q8N271 834 aa11.97□□□□□ -0.49
CLCN3-207ENST00000511092 FKBP8Q14318 412 aa11.96□□□□□ -0.49
CLCN3-207ENST00000511092 NCOA1Q15788 1441 aa11.95□□□□□ -0.5
CLCN3-207ENST00000511092 CEBPAP49715 358 aaPredicted RBP11.95□□□□□ -0.5
CLCN3-207ENST00000511092 SETD1BQ9UPS6 1966 aaKnown RBP11.94□□□□□ -0.5
CLCN3-207ENST00000511092 ERICH3Q5RHP9 1530 aa11.93□□□□□ -0.5
CLCN3-207ENST00000511092 EVX2Q03828 476 aa11.93□□□□□ -0.5
CLCN3-207ENST00000511092 UACAQ9BZF9 1416 aa11.92□□□□□ -0.5
CLCN3-207ENST00000511092 MLECQ14165 292 aa11.91□□□□□ -0.5
CLCN3-207ENST00000511092 FANCAO15360 1455 aa11.9□□□□□ -0.5
CLCN3-207ENST00000511092 FARP1Q9Y4F1 1045 aaPredicted RBP11.9□□□□□ -0.5
CLCN3-207ENST00000511092 RICTORQ6R327 1708 aa11.88□□□□□ -0.51
CLCN3-207ENST00000511092 ARHGEF12Q9NZN5 1544 aa11.87□□□□□ -0.51
CLCN3-207ENST00000511092 CAMSAP1Q5T5Y3 1602 aa11.87□□□□□ -0.51
CLCN3-207ENST00000511092 CREBZFQ9NS37 354 aa11.87□□□□□ -0.51
CLCN3-207ENST00000511092 TNIKQ9UKE5 1360 aa11.87□□□□□ -0.51
CLCN3-207ENST00000511092 POGZQ7Z3K3 1410 aa11.86□□□□□ -0.51
CLCN3-207ENST00000511092 C3P01024 1663 aa11.85□□□□□ -0.51
CLCN3-207ENST00000511092 TOM1O60784 492 aa11.84□□□□□ -0.51
CLCN3-207ENST00000511092 RBM33Q96EV2 1170 aaKnown RBP11.84□□□□□ -0.51
CLCN3-207ENST00000511092 KCNH8Q96L42 1107 aa11.83□□□□□ -0.52
CLCN3-207ENST00000511092 NCKAP5LQ9HCH0 1330 aa11.81□□□□□ -0.52
CLCN3-207ENST00000511092 SUPT6HQ7KZ85 1726 aaKnown RBP11.78□□□□□ -0.52
CLCN3-207ENST00000511092 TRIM52Q96A61 297 aa11.78□□□□□ -0.52
CLCN3-207ENST00000511092 CD44P16070 742 aaKnown RBP11.77□□□□□ -0.53
CLCN3-207ENST00000511092 ZFYVE16Q7Z3T8 1539 aa11.76□□□□□ -0.53
CLCN3-207ENST00000511092 LRRC7Q96NW7 1537 aa11.76□□□□□ -0.53
CLCN3-207ENST00000511092 AKNAQ7Z591 1439 aa11.75□□□□□ -0.53
CLCN3-207ENST00000511092 LRP5O75197 1615 aa11.74□□□□□ -0.53
CLCN3-207ENST00000511092 RAPGEF6Q8TEU7 1601 aa11.74□□□□□ -0.53
CLCN3-207ENST00000511092 ABCA9Q8IUA7 1624 aa11.73□□□□□ -0.53
CLCN3-207ENST00000511092 CPS1P31327 1500 aa11.72□□□□□ -0.53
CLCN3-207ENST00000511092 CARMIL2Q6F5E8 1435 aa11.72□□□□□ -0.53
CLCN3-207ENST00000511092 PTPRKQ15262 1439 aa11.71□□□□□ -0.53
CLCN3-207ENST00000511092 MNX1P50219 401 aaPredicted RBP11.71□□□□□ -0.53
CLCN3-207ENST00000511092 ZMYM4Q5VZL5 1548 aa11.7□□□□□ -0.54
CLCN3-207ENST00000511092 DISP1Q96F81 1524 aa11.7□□□□□ -0.54
CLCN3-207ENST00000511092 NEO1Q92859 1461 aa11.7□□□□□ -0.54
CLCN3-207ENST00000511092 GABBR2O75899 941 aa11.7□□□□□ -0.54
CLCN3-207ENST00000511092 CLCN6P51797 869 aa11.7□□□□□ -0.54
CLCN3-207ENST00000511092 EFCAB5A4FU69 1503 aa11.7□□□□□ -0.54
CLCN3-207ENST00000511092 SENP3-EIF4A1A0A087X0R7 540 aa11.68□□□□□ -0.54
CLCN3-207ENST00000511092 WRNQ14191 1432 aaPredicted RBP eCLIP11.68□□□□□ -0.54
CLCN3-207ENST00000511092 RNF17Q9BXT8 1623 aaKnown RBP11.68□□□□□ -0.54
CLCN3-207ENST00000511092 PHLDB1Q86UU1 1377 aa11.67□□□□□ -0.54
CLCN3-207ENST00000511092 ZNF142P52746 1687 aaPredicted RBP11.67□□□□□ -0.54
CLCN3-207ENST00000511092 TCOF1Q13428 1488 aaKnown RBP11.66□□□□□ -0.54
CLCN3-207ENST00000511092 ZNF579Q8NAF0 562 aaKnown RBP11.66□□□□□ -0.54
CLCN3-207ENST00000511092 ZRANB1Q9UGI0 708 aa11.66□□□□□ -0.54
CLCN3-207ENST00000511092 STRCP1A6NGW2 1772 aa11.66□□□□□ -0.54
CLCN3-207ENST00000511092 SHANK2Q9UPX8 1470 aa11.64□□□□□ -0.55
CLCN3-207ENST00000511092 SLC34A2O95436 690 aa11.64□□□□□ -0.55
CLCN3-207ENST00000511092 YY1P25490 414 aa11.64□□□□□ -0.55
CLCN3-207ENST00000511092 HECW1Q76N89 1606 aa11.64□□□□□ -0.55
CLCN3-207ENST00000511092 POLR1AO95602 1720 aaPredicted RBP11.63□□□□□ -0.55
CLCN3-207ENST00000511092 DENND4BO75064 1496 aaPredicted RBP11.63□□□□□ -0.55
CLCN3-207ENST00000511092 IQGAP2Q13576 1575 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms