RNA–Protein interactions for RNA: ENST00000511002.5

SH3TC1-220, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 5

Gene SH3TC1, Length 1,124 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-220ENST00000511002 PREX2Q70Z35 1606 aa24.75■■□□□ 1.55
SH3TC1-220ENST00000511002 EFCAB2Q5VUJ9 269 aa24.74■■□□□ 1.55
SH3TC1-220ENST00000511002 CDC42BPAQ5VT25 1732 aa24.73■■□□□ 1.55
SH3TC1-220ENST00000511002 ZMYM4Q5VZL5 1548 aa24.73■■□□□ 1.55
SH3TC1-220ENST00000511002 ARHGEF40Q8TER5 1519 aa24.72■■□□□ 1.55
SH3TC1-220ENST00000511002 POGZQ7Z3K3 1410 aa24.72■■□□□ 1.55
SH3TC1-220ENST00000511002 VPS8Q8N3P4 1428 aa24.72■■□□□ 1.55
SH3TC1-220ENST00000511002 YEATS2Q9ULM3 1422 aa24.7■■□□□ 1.55
SH3TC1-220ENST00000511002 MTUS2Q5JR59 1369 aa24.67■■□□□ 1.54
SH3TC1-220ENST00000511002 SIGLEC1Q9BZZ2 1709 aa24.66■■□□□ 1.54
SH3TC1-220ENST00000511002 ZFYVE16Q7Z3T8 1539 aa24.66■■□□□ 1.54
SH3TC1-220ENST00000511002 ARHGEF12Q9NZN5 1544 aa24.65■■□□□ 1.54
SH3TC1-220ENST00000511002 GPATCH8Q9UKJ3 1502 aaKnown RBP24.65■■□□□ 1.54
SH3TC1-220ENST00000511002 ABCC1P33527 1531 aa24.63■■□□□ 1.53
SH3TC1-220ENST00000511002 EHBP1L1Q8N3D4 1523 aa24.62■■□□□ 1.53
SH3TC1-220ENST00000511002 AFAP1Q8N556 730 aa24.61■■□□□ 1.53
SH3TC1-220ENST00000511002 TRAPPC8Q9Y2L5 1435 aa24.61■■□□□ 1.53
SH3TC1-220ENST00000511002 ADAMTSL3P82987 1691 aa24.6■■□□□ 1.53
SH3TC1-220ENST00000511002 ITSN2Q9NZM3 1697 aa24.6■■□□□ 1.53
SH3TC1-220ENST00000511002 KDM5CP41229 1560 aa24.6■■□□□ 1.53
SH3TC1-220ENST00000511002 SAMD9LQ8IVG5 1584 aa24.6■■□□□ 1.53
SH3TC1-220ENST00000511002 MAGI2Q86UL8 1455 aa24.6■■□□□ 1.53
SH3TC1-220ENST00000511002 ZNF518AQ6AHZ1 1483 aa24.59■■□□□ 1.53
SH3TC1-220ENST00000511002 BCORL1Q5H9F3 1711 aa24.59■■□□□ 1.53
SH3TC1-220ENST00000511002 TIAM1Q13009 1591 aa24.59■■□□□ 1.53
SH3TC1-220ENST00000511002 ARID4BQ4LE39 1312 aaPredicted RBP24.58■■□□□ 1.52
SH3TC1-220ENST00000511002 ZNF777Q9ULD5 760 aaPredicted RBP24.56■■□□□ 1.52
SH3TC1-220ENST00000511002 CCNB3Q8WWL7 1395 aa24.55■■□□□ 1.52
SH3TC1-220ENST00000511002 HECW2Q9P2P5 1572 aa24.54■■□□□ 1.52
SH3TC1-220ENST00000511002 SYCP2Q9BX26 1530 aa24.53■■□□□ 1.52
SH3TC1-220ENST00000511002 MADDQ8WXG6 1647 aa24.53■■□□□ 1.52
SH3TC1-220ENST00000511002 ATP10AO60312 1499 aa24.51■■□□□ 1.51
SH3TC1-220ENST00000511002 CFDP1Q9UEE9 299 aaPredicted RBP24.5■■□□□ 1.51
SH3TC1-220ENST00000511002 DIP2CQ9Y2E4 1556 aa24.5■■□□□ 1.51
SH3TC1-220ENST00000511002 ABCA6Q8N139 1617 aa24.5■■□□□ 1.51
SH3TC1-220ENST00000511002 NCOA2Q15596 1464 aa24.49■■□□□ 1.51
SH3TC1-220ENST00000511002 SUPT6HQ7KZ85 1726 aaKnown RBP24.49■■□□□ 1.51
SH3TC1-220ENST00000511002 HNRNPMP52272 730 aaKnown RBP eCLIP24.48■■□□□ 1.515e-8■■■■□ 19.4
SH3TC1-220ENST00000511002 C9orf84Q5VXU9 1444 aa24.48■■□□□ 1.51
SH3TC1-220ENST00000511002 MLH3Q9UHC1 1453 aa24.48■■□□□ 1.51
SH3TC1-220ENST00000511002 KIDINS220Q9ULH0 1771 aa24.47■■□□□ 1.51
SH3TC1-220ENST00000511002 LRRC9Q6ZRR7 1453 aa24.47■■□□□ 1.51
SH3TC1-220ENST00000511002 ZNF644Q9H582 1327 aaPredicted RBP24.47■■□□□ 1.51
SH3TC1-220ENST00000511002 PTPRMP28827 1452 aa24.46■■□□□ 1.51
SH3TC1-220ENST00000511002 MYT1LQ9UL68 1186 aa24.46■■□□□ 1.51
SH3TC1-220ENST00000511002 KANK4Q5T7N3 995 aaPredicted RBP24.45■■□□□ 1.5
SH3TC1-220ENST00000511002 RIMS1Q86UR5 1692 aaKnown RBP24.45■■□□□ 1.5
SH3TC1-220ENST00000511002 MAP3K1Q13233 1512 aa24.45■■□□□ 1.5
SH3TC1-220ENST00000511002 MLECQ14165 292 aa24.44■■□□□ 1.5
SH3TC1-220ENST00000511002 KIAA1107Q9UPP5 1409 aa24.43■■□□□ 1.5
SH3TC1-220ENST00000511002 PLEKHH2Q8IVE3 1493 aa24.41■■□□□ 1.5
SH3TC1-220ENST00000511002 REREQ9P2R6 1566 aa24.38■■□□□ 1.49
SH3TC1-220ENST00000511002 MBD5Q9P267 1494 aa24.38■■□□□ 1.49
SH3TC1-220ENST00000511002 FER1L4A9Z1Z3 1794 aa24.37■■□□□ 1.49
SH3TC1-220ENST00000511002 INO80Q9ULG1 1556 aaPredicted RBP24.36■■□□□ 1.49
SH3TC1-220ENST00000511002 SPAG9O60271 1321 aaKnown RBP24.35■■□□□ 1.49
SH3TC1-220ENST00000511002 CAMSAP2Q08AD1 1489 aa24.35■■□□□ 1.49
SH3TC1-220ENST00000511002 ATP7AQ04656 1500 aa24.35■■□□□ 1.49
SH3TC1-220ENST00000511002 APLP2Q06481 763 aa24.33■■□□□ 1.49
SH3TC1-220ENST00000511002 PLPPR3Q6T4P5 718 aa24.32■■□□□ 1.48
SH3TC1-220ENST00000511002 AGLP35573 1532 aa24.31■■□□□ 1.48
SH3TC1-220ENST00000511002 PLXNC1O60486 1568 aa24.25■■□□□ 1.47
SH3TC1-220ENST00000511002 CCDC141Q6ZP82 1450 aa24.25■■□□□ 1.47
SH3TC1-220ENST00000511002 MYOM3Q5VTT5 1437 aa24.24■■□□□ 1.47
SH3TC1-220ENST00000511002 A2MP01023 1474 aa24.24■■□□□ 1.47
SH3TC1-220ENST00000511002 CEBPAP49715 358 aaPredicted RBP24.22■■□□□ 1.47
SH3TC1-220ENST00000511002 ARHGEF5Q12774 1597 aa24.21■■□□□ 1.47
SH3TC1-220ENST00000511002 ADGBQ8N7X0 1667 aa24.21■■□□□ 1.47
SH3TC1-220ENST00000511002 LMTK3Q96Q04 1460 aa24.2■■□□□ 1.47
SH3TC1-220ENST00000511002 RTEL1-TNFRSF6BF6WH68 1400 aa24.2■■□□□ 1.46
SH3TC1-220ENST00000511002 MIA2Q96PC5 1412 aa24.18■■□□□ 1.46
SH3TC1-220ENST00000511002 C3P01024 1663 aa24.15■■□□□ 1.46
SH3TC1-220ENST00000511002 PPARGC1BQ86YN6 1023 aaKnown RBP24.14■■□□□ 1.45
SH3TC1-220ENST00000511002 RSPH4AQ5TD94 716 aa24.13■■□□□ 1.45
SH3TC1-220ENST00000511002 PTPN23Q9H3S7 1636 aa24.12■■□□□ 1.45
SH3TC1-220ENST00000511002 DHX29Q7Z478 1369 aaKnown RBP24.11■■□□□ 1.45
SH3TC1-220ENST00000511002 HSPA2P54652 639 aa24.1■■□□□ 1.45
SH3TC1-220ENST00000511002 MAST1Q9Y2H9 1570 aa24.1■■□□□ 1.45
SH3TC1-220ENST00000511002 FGD6Q6ZV73 1430 aa24.1■■□□□ 1.45
SH3TC1-220ENST00000511002 GGT6Q6P531 493 aa24.09■■□□□ 1.45
SH3TC1-220ENST00000511002 CLTCQ00610 1675 aaKnown RBP24.08■■□□□ 1.45
SH3TC1-220ENST00000511002 TSPY4P0CV99 314 aa24.07■■□□□ 1.44
SH3TC1-220ENST00000511002 TSPY10P0CW01 314 aa24.07■■□□□ 1.44
SH3TC1-220ENST00000511002 CNTLNQ9NXG0 1405 aa24.07■■□□□ 1.44
SH3TC1-220ENST00000511002 MROH2AA6NES4 1674 aa24.06■■□□□ 1.44
SH3TC1-220ENST00000511002 PREX1Q8TCU6 1659 aa24.06■■□□□ 1.44
SH3TC1-220ENST00000511002 ESF1Q9H501 851 aaKnown RBP24.06■■□□□ 1.44
SH3TC1-220ENST00000511002 TCOF1Q13428 1488 aaKnown RBP24.06■■□□□ 1.44
SH3TC1-220ENST00000511002 ABCC5O15440 1437 aa24.04■■□□□ 1.44
SH3TC1-220ENST00000511002 CROCC2H7BZ55 1655 aa24.04■■□□□ 1.44
SH3TC1-220ENST00000511002 KIF3BO15066 747 aa24.03■■□□□ 1.44
SH3TC1-220ENST00000511002 ZMYM3Q14202 1370 aa24.03■■□□□ 1.44
SH3TC1-220ENST00000511002 SETD1BQ9UPS6 1966 aaKnown RBP24.02■■□□□ 1.44
SH3TC1-220ENST00000511002 DNMT1P26358 1616 aaKnown RBP24.01■■□□□ 1.43
SH3TC1-220ENST00000511002 DAPK1P53355 1430 aa24■■□□□ 1.43
SH3TC1-220ENST00000511002 UHRF1BP1Q6BDS2 1440 aa23.97■■□□□ 1.43
SH3TC1-220ENST00000511002 SHANK2Q9UPX8 1470 aa23.97■■□□□ 1.43
SH3TC1-220ENST00000511002 PTPRKQ15262 1439 aa23.93■■□□□ 1.42
SH3TC1-220ENST00000511002 RNF17Q9BXT8 1623 aaKnown RBP23.93■■□□□ 1.42
SH3TC1-220ENST00000511002 PPP6R1Q9UPN7 881 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms