RNA–Protein interactions for RNA: ENST00000508909.5

FRAS1-204, Transcript of Fraser extracellular matrix complex subunit 1, humanhuman

TSL 2

Gene FRAS1, Length 2,297 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRAS1-204ENST00000508909 ROCK1Q13464 1354 aa22.25■■□□□ 1.15
FRAS1-204ENST00000508909 ANP32EQ9BTT0 268 aa22.24■■□□□ 1.15
FRAS1-204ENST00000508909 RBM19Q9Y4C8 960 aaKnown RBP22.24■■□□□ 1.15
FRAS1-204ENST00000508909 CNTLNQ9NXG0 1405 aa22.23■■□□□ 1.15
FRAS1-204ENST00000508909 NCOA1Q15788 1441 aa22.22■■□□□ 1.15
FRAS1-204ENST00000508909 DISP1Q96F81 1524 aa22.22■■□□□ 1.15
FRAS1-204ENST00000508909 ZNF608Q9ULD9 1512 aaPredicted RBP22.22■■□□□ 1.15
FRAS1-204ENST00000508909 MRC2Q9UBG0 1479 aa22.22■■□□□ 1.15
FRAS1-204ENST00000508909 RPRD2Q5VT52 1461 aaKnown RBP22.21■■□□□ 1.15
FRAS1-204ENST00000508909 CCDC7Q96M83 1385 aa22.21■■□□□ 1.15
FRAS1-204ENST00000508909 NUP153P49790 1475 aaKnown RBP22.2■■□□□ 1.14
FRAS1-204ENST00000508909 TEX14Q8IWB6 1497 aa22.18■■□□□ 1.14
FRAS1-204ENST00000508909 PRKRIP1Q9H875 184 aaPredicted RBP22.18■■□□□ 1.14
FRAS1-204ENST00000508909 KIAA0586Q9BVV6 1533 aa22.18■■□□□ 1.14
FRAS1-204ENST00000508909 DNMT1P26358 1616 aaKnown RBP22.18■■□□□ 1.14
FRAS1-204ENST00000508909 KIAA0556O60303 1618 aa22.16■■□□□ 1.14
FRAS1-204ENST00000508909 SPATA31E1Q6ZUB1 1445 aa22.16■■□□□ 1.14
FRAS1-204ENST00000508909 IRX6P78412 446 aaPredicted RBP22.15■■□□□ 1.14
FRAS1-204ENST00000508909 SLC4A1APQ9BWU0 796 aaKnown RBP22.15■■□□□ 1.14
FRAS1-204ENST00000508909 IFT140Q96RY7 1462 aa22.12■■□□□ 1.13
FRAS1-204ENST00000508909 KIF7Q2M1P5 1343 aa22.11■■□□□ 1.13
FRAS1-204ENST00000508909 PRG4Q92954 1404 aaPredicted RBP22.09■■□□□ 1.13
FRAS1-204ENST00000508909 RAPGEF6Q8TEU7 1601 aa22.09■■□□□ 1.13
FRAS1-204ENST00000508909 CDK11AQ9UQ88 783 aaPredicted RBP22.09■■□□□ 1.13
FRAS1-204ENST00000508909 PZPP20742 1482 aa22.09■■□□□ 1.13
FRAS1-204ENST00000508909 FAM9BQ8IZU0 186 aa22.08■■□□□ 1.12
FRAS1-204ENST00000508909 GRIN2AQ12879 1464 aa22.06■■□□□ 1.12
FRAS1-204ENST00000508909 MRS2Q9HD23 443 aa22.06■■□□□ 1.12
FRAS1-204ENST00000508909 TROQ12816 1431 aaPredicted RBP22.04■■□□□ 1.12
FRAS1-204ENST00000508909 CFDP1Q9UEE9 299 aaPredicted RBP22.04■■□□□ 1.12
FRAS1-204ENST00000508909 CAMSAP2Q08AD1 1489 aa22.03■■□□□ 1.12
FRAS1-204ENST00000508909 GPATCH8Q9UKJ3 1502 aaKnown RBP22.02■■□□□ 1.12
FRAS1-204ENST00000508909 PLB1Q6P1J6 1458 aa22■■□□□ 1.11
FRAS1-204ENST00000508909 ZBED9Q6R2W3 1325 aa22■■□□□ 1.11
FRAS1-204ENST00000508909 ERICH6BQ5W0A0 696 aa22■■□□□ 1.11
FRAS1-204ENST00000508909 MBD5Q9P267 1494 aa21.99■■□□□ 1.11
FRAS1-204ENST00000508909 MSH5O43196 834 aa21.97■■□□□ 1.11
FRAS1-204ENST00000508909 ZNF777Q9ULD5 760 aaPredicted RBP21.97■■□□□ 1.11
FRAS1-204ENST00000508909 KIAA1107Q9UPP5 1409 aa21.97■■□□□ 1.11
FRAS1-204ENST00000508909 EIF4G3O43432 1585 aaKnown RBP21.96■■□□□ 1.11
FRAS1-204ENST00000508909 DHX29Q7Z478 1369 aaKnown RBP21.96■■□□□ 1.11
FRAS1-204ENST00000508909 POLR1AO95602 1720 aaPredicted RBP21.96■■□□□ 1.11
FRAS1-204ENST00000508909 PPP4R2Q9NY27 417 aa21.96■■□□□ 1.11
FRAS1-204ENST00000508909 ADGRL2O95490 1459 aa21.96■■□□□ 1.11
FRAS1-204ENST00000508909 PKD2Q13563 968 aa21.95■■□□□ 1.1
FRAS1-204ENST00000508909 KIF14Q15058 1648 aa21.95■■□□□ 1.1
FRAS1-204ENST00000508909 CEP170Q5SW79 1584 aa21.92■■□□□ 1.1
FRAS1-204ENST00000508909 USP47Q96K76 1375 aa21.91■■□□□ 1.1
FRAS1-204ENST00000508909 BCORL1Q5H9F3 1711 aa21.91■■□□□ 1.1
FRAS1-204ENST00000508909 CHMP7Q8WUX9 453 aaPredicted RBP21.91■■□□□ 1.1
FRAS1-204ENST00000508909 ADGBQ8N7X0 1667 aa21.91■■□□□ 1.1
FRAS1-204ENST00000508909 ITSN2Q9NZM3 1697 aa21.9■■□□□ 1.1
FRAS1-204ENST00000508909 ZNF326Q5BKZ1 582 aaKnown RBP21.9■■□□□ 1.1
FRAS1-204ENST00000508909 ADCY10Q96PN6 1610 aa21.89■■□□□ 1.1
FRAS1-204ENST00000508909 ANKRD30AQ9BXX3 1397 aa21.89■■□□□ 1.1
FRAS1-204ENST00000508909 JPH4Q96JJ6 628 aa21.88■■□□□ 1.09
FRAS1-204ENST00000508909 FANCIQ9NVI1 1328 aa21.88■■□□□ 1.09
FRAS1-204ENST00000508909 ANKRD50Q9ULJ7 1429 aa21.88■■□□□ 1.09
FRAS1-204ENST00000508909 MAGI1Q96QZ7 1491 aaPredicted RBP21.88■■□□□ 1.09
FRAS1-204ENST00000508909 CROCC2H7BZ55 1655 aa21.87■■□□□ 1.09
FRAS1-204ENST00000508909 SYNJ2O15056 1496 aa21.86■■□□□ 1.09
FRAS1-204ENST00000508909 B4GALNT3Q6L9W6 998 aa21.86■■□□□ 1.09
FRAS1-204ENST00000508909 FBLN2P98095 1184 aa21.85■■□□□ 1.09
FRAS1-204ENST00000508909 CNGB1Q14028 1251 aaPredicted RBP21.85■■□□□ 1.09
FRAS1-204ENST00000508909 KDM5CP41229 1560 aa21.84■■□□□ 1.09
FRAS1-204ENST00000508909 POLR3GLQ9BT43 218 aa21.83■■□□□ 1.09
FRAS1-204ENST00000508909 UHRF1BP1Q6BDS2 1440 aa21.83■■□□□ 1.08
FRAS1-204ENST00000508909 NUP155O75694 1391 aa21.82■■□□□ 1.08
FRAS1-204ENST00000508909 ABCC10Q5T3U5 1492 aa21.81■■□□□ 1.08
FRAS1-204ENST00000508909 ARID4BQ4LE39 1312 aaPredicted RBP21.81■■□□□ 1.08
FRAS1-204ENST00000508909 CARMIL2Q6F5E8 1435 aa21.81■■□□□ 1.08
FRAS1-204ENST00000508909 NUP160Q12769 1436 aa21.81■■□□□ 1.08
FRAS1-204ENST00000508909 PLEKHD1A6NEE1 506 aa21.81■■□□□ 1.08
FRAS1-204ENST00000508909 SMG6Q86US8 1419 aaKnown RBP21.8■■□□□ 1.08
FRAS1-204ENST00000508909 ATP10BO94823 1461 aa21.79■■□□□ 1.08
FRAS1-204ENST00000508909 C9orf84Q5VXU9 1444 aa21.78■■□□□ 1.08
FRAS1-204ENST00000508909 RALGAPBQ86X10 1494 aa21.78■■□□□ 1.08
FRAS1-204ENST00000508909 PNISRQ8TF01 805 aaKnown RBP21.77■■□□□ 1.08
FRAS1-204ENST00000508909 CDC42BPAQ5VT25 1732 aa21.77■■□□□ 1.08
FRAS1-204ENST00000508909 ABCA8O94911 1581 aa21.76■■□□□ 1.07
FRAS1-204ENST00000508909 SHANK2Q9UPX8 1470 aa21.76■■□□□ 1.07
FRAS1-204ENST00000508909 CARD11Q9BXL7 1154 aa21.76■■□□□ 1.07
FRAS1-204ENST00000508909 NUDCQ9Y266 331 aa21.75■■□□□ 1.07
FRAS1-204ENST00000508909 RNF123Q5XPI4 1314 aa21.74■■□□□ 1.07
FRAS1-204ENST00000508909 HNRNPMP52272 730 aaKnown RBP eCLIP21.73■■□□□ 1.07
FRAS1-204ENST00000508909 KDM2AQ9Y2K7 1162 aa21.73■■□□□ 1.07
FRAS1-204ENST00000508909 SENP3-EIF4A1A0A087X0R7 540 aa21.73■■□□□ 1.07
FRAS1-204ENST00000508909 ST20-MTHFSA0A0A6YYL1 179 aa21.72■■□□□ 1.07
FRAS1-204ENST00000508909 ERCC6Q03468 1493 aa21.72■■□□□ 1.07
FRAS1-204ENST00000508909 KDM5DQ9BY66 1539 aa21.72■■□□□ 1.07
FRAS1-204ENST00000508909 TSPY4P0CV99 314 aa21.72■■□□□ 1.07
FRAS1-204ENST00000508909 TSPY10P0CW01 314 aa21.72■■□□□ 1.07
FRAS1-204ENST00000508909 ARHGEF12Q9NZN5 1544 aa21.71■■□□□ 1.07
FRAS1-204ENST00000508909 PTPRGP23470 1445 aa21.71■■□□□ 1.07
FRAS1-204ENST00000508909 ROCK2O75116 1388 aaKnown RBP21.71■■□□□ 1.07
FRAS1-204ENST00000508909 DCAF11Q8TEB1 546 aa21.69■■□□□ 1.06
FRAS1-204ENST00000508909 KIF15Q9NS87 1388 aa21.69■■□□□ 1.06
FRAS1-204ENST00000508909 TMC1Q8TDI8 760 aa21.68■■□□□ 1.06
FRAS1-204ENST00000508909 LRPPRCP42704 1394 aaKnown RBP21.64■■□□□ 1.06
FRAS1-204ENST00000508909 ARHGEF5Q12774 1597 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms